KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:46:39 2014 Check: 00 .. Name: ENSTTRP00000006245/1-232 Len: 466 Check: 7027 Weight: 1.00 Name: ENSP00000347649/1-437 Len: 466 Check: 5802 Weight: 1.00 Name: bmy_16704T0/1-345 Len: 466 Check: 8530 Weight: 1.00 Name: ENSBTAP00000036255/1-309 Len: 466 Check: 8402 Weight: 1.00 // 1 50 ENSTTRP00000006245/1-232 ---------- ---------- ---------- ---------- ---------- ENSP00000347649/1-437 MARVAWGLLW LLLGSAGAQY EKYSFRGFPP EDLMPLAAAY GHALEQYEGE bmy_16704T0/1-345 -MEIEWEV-- ---------- ---------- ---------- ---------- ENSBTAP00000036255/1-309 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000006245/1-232 ---------- ---------- ---------- ---------- ---------- ENSP00000347649/1-437 SWRESARYLE AALRLHRLLR DSEAFCHANC SGPAPAAKPD PDGGRADEWA bmy_16704T0/1-345 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036255/1-309 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000006245/1-232 ---------- ---------- ---------- ---------- ---------- ENSP00000347649/1-437 CELRLFGRVL ERAACLRRCK RTLPAFQVPY PPRQLLRDFQ SRLPYQYLHY bmy_16704T0/1-345 ---------- ---------- -------VPY PPRQLLRDFQ SRLPYQYLHY ENSBTAP00000036255/1-309 ---------- ---------- ---------X PPRQLLRDFQ SRLPYQYLHY 151 200 ENSTTRP00000006245/1-232 ---------- ---------- ---------- ---------- ---------- ENSP00000347649/1-437 ALFKANRLEK AVAAAYTFLQ RNPKHELTAK YLNYYQGMLD VADESLTDLE bmy_16704T0/1-345 AQFKANRLEK AVAAAYTFLQ RNPKHELTAK YLNYYRGLLD AADEPLTDLE ENSBTAP00000036255/1-309 AQFKANRLEK AVAAAYTFLQ RNPKHELTAK YLSYYRGLLD AADEPLTDLE 201 250 ENSTTRP00000006245/1-232 -----AVFLR AVKLYNSGDF RSSTEDMERA LAEYMAVFAR CLAGCEGAHE ENSP00000347649/1-437 AQPYEAVFLR AVKLYNSGDF RSSTEDMERA LSEYLAVFAR CLAGCEGAHE bmy_16704T0/1-345 AQPYEAVFLR AVKLYNSGDF RSSTEDMERA LAEYMAVFAR CLAGCEGAHE ENSBTAP00000036255/1-309 AQPYEAVFLR AVKLYNSGDF RGSTEDMERA LAEYLAVFAR CLAGCEGAHE 251 300 ENSTTRP00000006245/1-232 QVDFKDFYPA IA-DLFAESL QCKVDCEANL TPNVGGFFVE KFVATMYHYL ENSP00000347649/1-437 QVDFKDFYPA IA-DLFAESL QCKVDCEANL TPNVGGYFVD KFVATMYHYL bmy_16704T0/1-345 QVDFKDFYPA IA-DLFAESL QCKVDCEANL TPNVGGYFVE KFVATMYHYL ENSBTAP00000036255/1-309 QVDFKDFYPA IAEDLFAESL QCKVDCEANL TPNVGGYFVE KFVATMYHYL 301 350 ENSTTRP00000006245/1-232 QFAYYKLNDV HQAARSAASY MLFDHEDNVM QQNLVYYRFH RARWGLEEED ENSP00000347649/1-437 QFAYYKLNDV RQAARSAASY MLFDPKDSVM QQNLVYYRFH RARWGLEEED bmy_16704T0/1-345 QFAYYKLNDV RQAARSAASY MLFDPEDNVM QQNLVYYRFH RARWGLEEED ENSBTAP00000036255/1-309 QFAYYKLNDV RQAARSAASY MLFDPEDNVM QQNLVYYRFH RARWGLEEED 351 400 ENSTTRP00000006245/1-232 FQPREXXXXX XXXXXXXXXX XXXXXXXXXX XXXMELKETE PPVEPEEPPS ENSP00000347649/1-437 FQPREEAMLY HNQTAELREL LEFTHMYLQS DDEMELEETE PPLEPEDALS bmy_16704T0/1-345 FQPREEAMLY HNQTAELREL LEFAHMYLQS DDEMELKETE PPMEPEEPPS ENSBTAP00000036255/1-309 FQPREEARLY HNQTAELREL LDFAHMYLQS DDEMELEETE PPMEPEKPPS 401 450 ENSTTRP00000006245/1-232 DAEFEGEGDY EESIYADWWQ EPDAKGDEAE AE-------- ---------- ENSP00000347649/1-437 DAEFEGEGDY EEGMYADWWQ EPDAKGDEAE AE-------- ---------- bmy_16704T0/1-345 DAEFEGEGDY EESIYADWWQ EPDAKGDEAE AGAQKEENKQ QLGRPDLNLH ENSBTAP00000036255/1-309 DAEFEGEGDY EESIYADWWQ EPDAKGDEAE AE-------- ---------- 451 500 ENSTTRP00000006245/1-232 PEPELA---- ------ ENSP00000347649/1-437 PEPELA---- ------ bmy_16704T0/1-345 PQPVLGHSSG CPPDWK ENSBTAP00000036255/1-309 PEPELP---- ------