KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:44 2014 Check: 00 .. Name: ENSP00000363157/1-251 Len: 257 Check: 9311 Weight: 1.00 Name: ENSBTAP00000036310/1-256 Len: 257 Check: 7131 Weight: 1.00 Name: BACU007309/1-256 Len: 257 Check: 6745 Weight: 1.00 Name: bmy_18345T0/1-181 Len: 257 Check: 6510 Weight: 1.00 Name: ENSTTRP00000014621/1-250 Len: 257 Check: 7064 Weight: 1.00 // 1 50 ENSP00000363157/1-251 MAEDLGLSFG ETASVEMLPE HGSCRPKA-- ----RSSSAR WALTCCLVLL ENSBTAP00000036310/1-256 MAESLTLGFR ETASVEMLPE DGGCRPKARA GLASRRSSAH WPLTCCLLSI BACU007309/1-256 MAEDLGPGCG ETASIEMLPE DGGCRPKARA GLASRSSSAR WALTCCLVLL bmy_18345T0/1-181 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014621/1-250 MAEDLGPGFG VTVSVEMLPE DGGCRPKA-- ----RSNSAR CALTCCLVLL 51 100 ENSP00000363157/1-251 PFLAGLTTYL LVSQLRAQGE ACVQFQALKG QEFAPSHQQV YAPLRADGDK ENSBTAP00000036310/1-256 PILAALTTYL LVGQLRAQGE ACE-LRTPKE QEIGPSHQRA YAPPGADREK BACU007309/1-256 PILAGLTTYL LVGQLRAQGE ACV-FQTPKG QELGPSHQRS YAPPGAGGDK bmy_18345T0/1-181 ---------- ---------- ------TPKG QELGPSHQRS YAPPGAGGDK ENSTTRP00000014621/1-250 PILAGLTAYL LVGQLRAQGE ACV-FQTPKG QELGPSYQRS YAPPGAGGDK 101 150 ENSP00000363157/1-251 PRAHLTVVRQ TPTQHFKNQF PALHWEHELG LAFTKNRMNY TNKFLLIPES ENSBTAP00000036310/1-256 PRAHLTVVRQ TPMQPLKNQF PALHWEHELG LAFTKNRMNY TNKFLVIPES BACU007309/1-256 PRAHLTVVRQ TPMQSLKNQF PALHWEHELG LAFTKNRMNY TNKFLVIPES bmy_18345T0/1-181 PRAHLTVVRQ TPTQSLKNQF PALHWEHELG LAFTKNRMNY TNKFLVIPES ENSTTRP00000014621/1-250 PRAHLTVVRQ TPTQSLKNQF PALHWEHELG LAFTKNRMNY TNKFLVIPES 151 200 ENSP00000363157/1-251 GDYFIYSQVT FRGMTSECSE IRQAGRPNKP DSITVVITKV TDSYPEPTQL ENSBTAP00000036310/1-256 GDYFVYSQVT FRGTTSECGE ISQGRRPNKP DSIIVVITKV TDSYPEPTQL BACU007309/1-256 GDYFIYSQVT FRGTTSECGE ISQGSRLNKP DSIIVVITKV TDSYPEPTQL bmy_18345T0/1-181 GDYFVYSQVT FRGTTSECGE ISQGSRLNKP DSIIVVITKV TDSYPEPTQL ENSTTRP00000014621/1-250 GDYFVYSQVT FRGTTSECGE ISQGSRLNKP DSIIVVITKV TDSYPEPTQL 201 250 ENSP00000363157/1-251 LMGTKSVCEV GSNWFQPIYL GAMFSLQEGD KLMVNVSDIS LVDYTKEDKT ENSBTAP00000036310/1-256 LMGTKSVCEI GSNWFQPIYL GAMFSLNEGD KLMVNVSDIS LVDYTKEDKT BACU007309/1-256 LMGTKSVCEI GSSWFQPIYL GAMFFLNEGD KLMVNVSDIS LVDYTKEDKT bmy_18345T0/1-181 LMGTKSVCEI GSNWFQPIYL GAMFFLNEGD KLMVNVSDIS LVDYTKEDKT ENSTTRP00000014621/1-250 LMGTKSVCEI GSNWFQPIYL GAMFFLNEGD KLMVNVSDIS LVDYTKEDKT 251 300 ENSP00000363157/1-251 FFGAFLL ENSBTAP00000036310/1-256 FFGAFLL BACU007309/1-256 FFGAFLL bmy_18345T0/1-181 FFGAFLL ENSTTRP00000014621/1-250 FFGAFLL