KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:44 2014 Check: 00 .. Name: ENSP00000223795/1-234 Len: 234 Check: 1088 Weight: 1.00 Name: ENSBTAP00000036314/1-234 Len: 234 Check: 8709 Weight: 1.00 Name: ENSTTRP00000005252/1-234 Len: 234 Check: 9366 Weight: 1.00 Name: bmy_18347T0/1-191 Len: 234 Check: 1061 Weight: 1.00 Name: BACU007308/1-215 Len: 234 Check: 4406 Weight: 1.00 // 1 50 ENSP00000223795/1-234 MDPGLQQALN GMAPPGDTAM HVPAGSVASH LGTTSRSYFY LTTATLALCL ENSBTAP00000036314/1-234 MDPGPQRALN PLAPSQDTAM HVPAGSVTSH WGTTGRGYFC FTTASLALCL ENSTTRP00000005252/1-234 MDAGLQRALN PLAPSQDTAM HVPAGSVTSH LGTTSRSYFY FTTASLALCL bmy_18347T0/1-191 ---------- ---------M HVPAGSVTSH LGTTSRGYFC FTTASLALCL BACU007308/1-215 ---------- ---------M HVPAGSVTSH LGTTSRGYFY FTTASLALCL 51 100 ENSP00000223795/1-234 VFTVATIMVL VVQRTDSIPN SPDNVPLKGG NCSEDLLCIL KRAPFKKSWA ENSBTAP00000036314/1-234 VFAVATIMVL VVQKTDSIPN PPGQFPLKGG NCSEDISCIL KRAPFKKSWA ENSTTRP00000005252/1-234 VFAVATIMVL VVQKTDSIPN PPGKFHLKGG NCSEDISCIL ERAAFKKSWA bmy_18347T0/1-191 VFAVATIMVL VVQKTDSIPH PPGKFHLKG- ---------- ---------- BACU007308/1-215 LFAVATIMVL VVQKTDSIPH PPGKFHLKGG NCSEDISCIL ERAPFKKSWA 101 150 ENSP00000223795/1-234 YLQVAKHLNK TKLSWNKDGI LHGVRYQDGN LVIQFPGLYF IICQLQFLVQ ENSBTAP00000036314/1-234 YLQVSKHINK TQLSWNKDGI IHGVRYQDEN LVIQFPGWYF IICQLQFLVK ENSTTRP00000005252/1-234 YLQVSKHINK TKLSWNKDGI THGVRYQDGN LVIQFPGWYF IICQLQFLVK bmy_18347T0/1-191 ---VSKHINK TKLSWNKDGI THGVRYQDGN LVIQFPGWYF IICQLQFLVK BACU007308/1-215 YLQVSKHINK TKLSWNKDGI THGVRYQDGN LVIQFPGWYF IICQLQFLVK 151 200 ENSP00000223795/1-234 CPNNSVDLKL ELLINKHIKK QALVTVCESG MQTKHVYQNL SQFLLDYLQV ENSBTAP00000036314/1-234 CPEHAVDLKL ELLINKDVKK QTLVTVCESG AQTKNIYQNL SQFLLEHLQV ENSTTRP00000005252/1-234 CPEHSVDLKL ELLINRDVKK QTLVTVCESG VQTKNIYQNL SQFLLEHLQV bmy_18347T0/1-191 CPEHSVDLKL ELLINKDVKK QTLVTVCESG VQTKNIYQNL SQFLLEHLQV BACU007308/1-215 CPEHSVDLKL ELLINKDVKK QTLVTVCESG VQTKNIYQNL SQFLLEHLQV 201 250 ENSP00000223795/1-234 NTTISVNVDT FQYIDTSTFP LENVLSIFLY SNSD ENSBTAP00000036314/1-234 NTTISVKVDK FQYVDTNTFP LENVLSLFLY SSSD ENSTTRP00000005252/1-234 NATISVKVDK FQYVDTNTFP LENVLSIFLY SSSD bmy_18347T0/1-191 NATISVKVDK FQYVDTNTFP LENVLSIFLY SSSD BACU007308/1-215 NATISVKVDK FQYVDTNTFP LENVLSIFLY SSSD