KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:46 2014 Check: 00 .. Name: ENSP00000441024/1-566 Len: 569 Check: 6778 Weight: 1.00 Name: ENSBTAP00000036333/1-502 Len: 569 Check: 6370 Weight: 1.00 Name: ENSTTRP00000010042/1-501 Len: 569 Check: 5480 Weight: 1.00 Name: bmy_05685T0/1-488 Len: 569 Check: 6107 Weight: 1.00 Name: BACU006662/1-518 Len: 569 Check: 2633 Weight: 1.00 // 1 50 ENSP00000441024/1-566 MSGAVRGRRR EVGLQHGGCG TGGGYGDGLA RSGQSWRWWR SLSLGAVGSS ENSBTAP00000036333/1-502 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010042/1-501 ---------- ---------- ---------- ---------- ---------- bmy_05685T0/1-488 ---------- ---------- ---------- ---------- ---------- BACU006662/1-518 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000441024/1-566 AGTEPGRPAG AS---TFRLL RRRQQRHSGT FSYLDDVPFK TGDKFKTPAK ENSBTAP00000036333/1-502 ---MASKKLG AD-------- ------FHGT FSYLDDVPFK IGDKFKTPAK ENSTTRP00000010042/1-501 ---MASKKLG AD-------- ------FHGT FSYLDDVPFK IGDKFKTPAK bmy_05685T0/1-488 ---MASKKLG AD-------- ------FHGT FSYLDDVPFK IGDKFKTPAK BACU006662/1-518 -MLYPRRKII PKQIISSLLI FCTLFLIVGT FSYLDDVPFK IGDKFKTPAK 101 150 ENSP00000441024/1-566 VGLPIGFSLP DCLQVVREVQ YDFSLEKKTI EWAEEIKKIE EAEREAECKI ENSBTAP00000036333/1-502 VGLPIGFSLP DCLQVVREVQ YDFSLEKKTI EWAEDIKKIQ EAQWEAERKA ENSTTRP00000010042/1-501 VGLPIGFSLP DCLQVVREVQ YDFSLEKKTI EWAEDIKKIQ EAQWEAERKA bmy_05685T0/1-488 VGLPIGFSLP DCLQVVREVQ YDFSLEKKTI EWAEDIKRIQ EAQCEAEHKA BACU006662/1-518 VGLPIGFSLP DCLQVVREVQ YDFSLEKKTI EWAEDIKKIQ EAQWEAEHKA 151 200 ENSP00000441024/1-566 AEAEAKVNSK SGPEGDSKMS FSKTHSTATM PPPINPILAS LQHNSILTPT ENSBTAP00000036333/1-502 EEAEATVNSK SGPEGDSKMS FSKTHGAAAM PPPINPILAS LQHNSILTPT ENSTTRP00000010042/1-501 EEAEAKVNSK SGPEGDSKMS FSKTHGTATM PPPINPILAS LQHNSILMPT bmy_05685T0/1-488 EEAEAKVNSK SGPEGDSKMS FSKTHSTATM PPPINPILAS LQHNSILTPT BACU006662/1-518 EEAEAKVNSK SGPEGDSKMS FSKTHSTATM PPPINPILAS LQHNSILTPT 201 250 ENSP00000441024/1-566 RVSSSATKQK VLSPPHIKAD FNLADFECEE DPFDNLELKT IDEKEELRNI ENSBTAP00000036333/1-502 RVSSSATKQK VLSPPHTKAD FNPADFECEE DPFDNLELKT IDEKEELRNI ENSTTRP00000010042/1-501 RVSSSATKQK VLSPPHTKAD FNPADFECEE DPFDNLELKT IDEKEELRNI bmy_05685T0/1-488 RVSSSATKQK VLSPPHTKAD FNPADFECEE DPFDNLELKT IDEKEELRNI BACU006662/1-518 RVSSSATKQK VLSPPHTKAD FNPADFECEE DPFDNLELKT IDEKEELRNI 251 300 ENSP00000441024/1-566 LVGTTGPIMA QLLDNNLPRG GSGSVLQDEE VLASLERATL DFKPLHKPNG ENSBTAP00000036333/1-502 LVGTSGPIMA QLLDSNLPRG GSGSVLQEEE VLASLERATL DFKPLHKPNG ENSTTRP00000010042/1-501 LVGTSGPIMA QLLDSNLPRG GSGSVLQDEE VLASLERATL DFKPLHKPNG bmy_05685T0/1-488 LVGTSGPIMA QLLDSNLPRG GSGSVLQDEE VLASLERATL DFKPLXKPNG BACU006662/1-518 LVGTSGPIMA QLLDSNLPRG GSGSVLQDEE VLASLERATL DFKPLHKPNG 301 350 ENSP00000441024/1-566 FITLPQLGNC EKMSLSSKVS LPPIPAVSNI KSLSFPKLDS DDSNQKTAKL ENSBTAP00000036333/1-502 FVTLPQLGNC EKMSLSSKVS LPPIPAVSNI KSLSFPKLDS DDSSQKTPKM ENSTTRP00000010042/1-501 FITLPQLGNC EKMSLSSKVS L-PIPAVSNI KSLSLPKLDS DDSSQKTAKM bmy_05685T0/1-488 FITLPQLGNC EKMSLSSKVS LPPIPAVSNI KSLSFPKLDS DDSSQKTAKM BACU006662/1-518 FITLPQLGNC EKMSLSSKVS LPPIPAVSNI KSLSFPKLDS DDSSQKTAKM 351 400 ENSP00000441024/1-566 ASTFHSTSCL RNGTFQNSLK PSTQSSASEL NGHHTLGLSA LNLDSGTEMP ENSBTAP00000036333/1-502 ASTFHSTSCL RSGMFWNFLK PSTQSSASEL NGHPTLGLSA LNLDSGTEVP ENSTTRP00000010042/1-501 ASTFHSTSCL CSGTFQNSLK PSTQSSASEL NGHHMLGLSA LNLDSGTEVP bmy_05685T0/1-488 ASTFHSTSCL RSGTFWNSLK PSTQSSASEL NGHHALGLSA LNLDSGTEVP BACU006662/1-518 ASTFHSTSCL RSGTFRNSLK PSTQSSASEL NGHHALGLSA LNLDSGTEVP 401 450 ENSP00000441024/1-566 ALTSSQMPSL SVLSVCTEES SPPNTGPTVT PPNFSVSQVP NMPSCPQAYS ENSBTAP00000036333/1-502 TLTPPQTPSL SVLSVCTEES APPNTRPTVT PPNFSVSQVP NTPSCPQAHS ENSTTRP00000010042/1-501 TLTHSQMPSL SVLSVCTEES SPPNTCPTVT PPNLSMSQVP NTPSCPQAYS bmy_05685T0/1-488 TLTHSQMPSL SVLS------ --------VT PPNFSMSQVP NTPSCPQAYS BACU006662/1-518 TLTHSQMPSL SVLSVCTEES SPPNTCPTVT PPNFSMSQVP NTPSCPQAYS 451 500 ENSP00000441024/1-566 ELQMLSPSER QCVETVVNMG YSYECVLRAM KKKGENIEQI LDYLFAHGQL ENSBTAP00000036333/1-502 ELQALSPSER HCVETVVNMG YSYECVLRAM KKKGENIEQI LDYLFAHGQL ENSTTRP00000010042/1-501 ELQTLSPSER HCVETVVSMG YSYECVLKAM KKKGENIEQI LDYLFAHGQL bmy_05685T0/1-488 ELQTLSPSER QCVETVVNMG YPYECVLKAM KKKGENIEQI LDYLFAHGQL BACU006662/1-518 ELQTLSPSER QCVETVVNMG YPYECVLKAM KKKGENIEQI LDYLFAHGQL 501 550 ENSP00000441024/1-566 CEKGFDPLLV EEALEMHQCS EEKMMEFLQL MSKFKEMGFE LKDIKEVLLL ENSBTAP00000036333/1-502 CEKGFDPLLV EEALEMQQCS EEKMMEFLQL MSKFKEMGFE LKDIKEALLL ENSTTRP00000010042/1-501 CEKGFDPLLV EEALEMQQCS EEKMMEFLQL MSKFKEMGFE LKDIKEVLLL bmy_05685T0/1-488 CEKGFDPLLV EEALEMQQCS EEKMMEFLQL MSKFKEMGFE LKDIKEVLLL BACU006662/1-518 CEKGFDPLLV EEALEMQQCS EEKMMEFLQL MSKFKEMGFE LKDIKEVLLL 551 600 ENSP00000441024/1-566 HNNDQDNALE DLMARAGAS ENSBTAP00000036333/1-502 HNNDQDSALE DLMARAGAS ENSTTRP00000010042/1-501 HNNDQDNALE DLMARAGAS bmy_05685T0/1-488 HNNDQDNALE DLMARAGAS BACU006662/1-518 HNNDQDNALE DLMARAGAS