KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:48 2014 Check: 00 .. Name: ENSP00000296266/1-1292 Len: 1340 Check: 4329 Weight: 1.00 Name: ENSBTAP00000036344/1-1241 Len: 1340 Check: 5311 Weight: 1.00 Name: bmy_00403T0/1-1110 Len: 1340 Check: 8062 Weight: 1.00 Name: ENSTTRP00000010685/1-1263 Len: 1340 Check: 4453 Weight: 1.00 Name: BACU015190/1-1285 Len: 1340 Check: 9773 Weight: 1.00 // 1 50 ENSP00000296266/1-1292 ---------- -MRAVLTWRD K--------- ----AEHC-- --------IN ENSBTAP00000036344/1-1241 ---------- -MRAVLTWRD K--------- ----VEQC-- --------VY bmy_00403T0/1-1110 ---------- -MRAVLTWRD K--------- ----AEQC-- --------VY ENSTTRP00000010685/1-1263 ---------- ---------- ---------- ---------- --------VY BACU015190/1-1285 MQFLAIIFLS HTQSVLHNGN KSLLSLPLAD LIILVPNCPF VLSCLLFSVY 51 100 ENSP00000296266/1-1292 DIAFKPDGTQ LILAAGSRLL VYDTSDGTLL QPLKGHKDTV YCVAYAKDGK ENSBTAP00000036344/1-1241 DLAFKPDGTQ LIVAAGNRLL VYDTSDGTLL QPLKGHKDTV YCVAYAKDGK bmy_00403T0/1-1110 DLAFKPDGTQ LILAAGNRLL VYDTSDGTLL QPLKGHKDTV YCVAYAKDGK ENSTTRP00000010685/1-1263 DLAFKPDGTQ LILAAGNRLL VYDTSDGTLL QPLKGHKDTV YCVAYAKDGK BACU015190/1-1285 DLAFKPDGTQ LILAAGNRLL VYDTSDGTLL QPLKGHKDTV YCVAYAKDGK 101 150 ENSP00000296266/1-1292 RFASGSADKS VIIWTSKLEG ILKYTSWSVM S---SLHLHL PFLGLHKTVR ENSBTAP00000036344/1-1241 RFASGSADKS VIIWTSKLEG ILKYT----- ---------- ---------- bmy_00403T0/1-1110 RFASGSADKS VIIWTSKLEG ILKYT----- ---------- ---------- ENSTTRP00000010685/1-1263 RFASGSADKS VIIWTSKLEG ILKYTYWSVF SLDLHPVLMN VFPGLHKAIS BACU015190/1-1285 RFASGSADKS VIIWTSKLEG ILKYT----- ---------- ---------- 151 200 ENSP00000296266/1-1292 VTATDKAPKG QGGRIDCLRP SVQNQPGQKH NDAIQCVSYN PITHQLASCS ENSBTAP00000036344/1-1241 ---------- ---------- ---------H NDSIQCVSYN PITHQLASCS bmy_00403T0/1-1110 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010685/1-1263 VRAINMALLR Q--------- ---------H NDSIQCVSYN PVTHQLASCS BACU015190/1-1285 ---------- ---------- ---------H NDSIQCVSYN PVTHQLASCS 201 250 ENSP00000296266/1-1292 SSDFGLWSPE QKSVSKHKSS SKIICCSWTN DGQYLALGMF NGIISIRNKN ENSBTAP00000036344/1-1241 SSDIGLWSPE QKSVSKHKSS SKITCCSWTN DGQYLALGMF NGVVSIRNKN bmy_00403T0/1-1110 ---------- ---------- -------WTN DGQYLALGMF NGIISIRNKN ENSTTRP00000010685/1-1263 SSDFGLWSPE QKSVSKHKSS SKITCCSWTN DGQYLALGMF SGVISIRNRN BACU015190/1-1285 SSDFGLWSPE QKSVSKHKSS SKITCCSWTN DGQYLALGMF NGVISIRNKN 251 300 ENSP00000296266/1-1292 GEEKVKIERP GGSLSPIWSI CWNPSSRWES FWMNRENEDA EDVIVNRYIQ ENSBTAP00000036344/1-1241 GEEKVKIERP GGSLSPIWSI SWNPSSRWEN FWMNIEIEDS EEAIVSRYFQ bmy_00403T0/1-1110 GEEKVKIERP GGSLSPVWSI CWNPSSRWES FWMNRENEDA EEVIVNRYFQ ENSTTRP00000010685/1-1263 GEEKVKIERP GGSLSPLWSI CWSPSSRWES FWMNRENEDA EEVIVNRYFQ BACU015190/1-1285 GEEKVKIERP GGSLSPVWSI CWNPSSRWQS FWMNRENEDA EEVIVNRYFQ 301 350 ENSP00000296266/1-1292 EIPSTLKSAV YSSQGSEAEE EEPEEEDDSP RDDNLEERND ILAVADWGQK ENSBTAP00000036344/1-1241 DIPSTLKSAV YSSQGSEAEE DEPEEEDNGA GDDSLEERNH KRAVADWGQK bmy_00403T0/1-1110 EIPSTLKSAV YSSQGSEAEE EEPEEEDDSP RDDNLEEHND ILAVADWGQK ENSTTRP00000010685/1-1263 EISSTLKSAV YSSQGSEAEE EEPEEEDDSP RDDNLEEHND ILAVADWGQK BACU015190/1-1285 EIPSTLKSAV CSSQGSEAEE EEPEEEDDSP RDDNLEEHND ILAVADWGQK 351 400 ENSP00000296266/1-1292 VSFYQLSGKQ IGKDRALNFD PCCISYFTKG EYILLGGSDK QVSLFTKDGV ENSBTAP00000036344/1-1241 LSFYQLSGKQ IGKDHSLNFD PCCISYFTKG EYILLGGSDK QVSLFTKDGV bmy_00403T0/1-1110 LSFYQLSGKQ IGKDRSLNFD PCCISYFTKG EYILLGGSDK QVSLFTKDGV ENSTTRP00000010685/1-1263 LSFYQLSGKQ IGKDRSLNFD PCCLSYFTKG EYILLGGSDK QVSLFTKDGV BACU015190/1-1285 LSFYQLSGKQ IGKDRSLNFD PCCINYFTKG EYILLGGSDK QVSLFTKDGV 401 450 ENSP00000296266/1-1292 RLGTVGEQNS WVWTCQAKPD SNYVVVGCQD GTISFYQLIF STVHGLYKDR ENSBTAP00000036344/1-1241 RLGAVGEQTS WVWTCKVKPD SNYVVVGCQD GTISFYQLIF STVHGLYKDR bmy_00403T0/1-1110 RLGTVGEQNS WVWTCKVKPD SNYVVVGCQD GTISFYQLIF STVHGLYKDR ENSTTRP00000010685/1-1263 RLGTVGEQNS WVWTCKVKPD SNYVVVGCQD GTISFYQLIF STVHGLYKDR BACU015190/1-1285 RLGTVGEQNS WVWTCKVKPD SNYVVVGCQD GTISFYQLIF STVHGLYKDR 451 500 ENSP00000296266/1-1292 YAYRDSMTDV IVQHLITEQK VRIKCKELVK KIAIYRNRLA IQLPEKILIY ENSBTAP00000036344/1-1241 YAYRDSMTDV IVQHLITEQK VRIKCKELVK KIAIYKNRLA IQLPEKILIY bmy_00403T0/1-1110 YAYRDSMTDV VVQHLITEQK VRIKCKELVK KIAIYKNRLA IQLPEKILIY ENSTTRP00000010685/1-1263 YAYRDSMTDV IVQHLITEQK VRIKCKELVK KIAIYKNRXX XXXXXXXXXX BACU015190/1-1285 YAYRDSMTDV IVQHLITEQK VRIKCKELVK KIAIYKNRLA IQLPEKILIY 501 550 ENSP00000296266/1-1292 ELYSEDLSDM HYRVKEKIIK KFECNLLVVC ANHIILCQEK RLQCLSFSGV ENSBTAP00000036344/1-1241 ELYSEDSLDM RYRVKEKIAR KFECNLLVVC ADHIILCQER RLQCLSFSGV bmy_00403T0/1-1110 ELYSDDSLDM RYRVKEKIVR KFECNLLVVC ADHIILCQEK RLQCLSFSGV ENSTTRP00000010685/1-1263 ELYSDDSLDM RYRMKEKIVR KFECNLLVVC ADHIILCQEK RLQCLSFSGV BACU015190/1-1285 ELYSDDSLDM RYRVKEKIVR KFECNLLVVC ADHIILCQEK RLQCLSFSGV 551 600 ENSP00000296266/1-1292 KEREWQMESL IRYIKVIGGP PGREGLLVGL KNGQILKIFV DNLFAIVLLK ENSBTAP00000036344/1-1241 KEREWQMESL IRYIKVIGGP PGREGLLVGL KNGQILKIFV DNLFAIVLLK bmy_00403T0/1-1110 KEREWQMESL IRYIKVIGGP PGREGLLVGL KNGQILKIFV DSLFAIVLLK ENSTTRP00000010685/1-1263 KEREWQMESL IRYIKVIGGP PGREGLLVGL KNGQILKIFV DSLFAIVLLK BACU015190/1-1285 KEREWQMESL IRYIKVIGGP PGREGLLVGL KNGQILKIFV DSLFAIVLLK 601 650 ENSP00000296266/1-1292 QATAVRCLDM SASRKKLAVV DENDTCLVYD IDTKELLFQE PNANSVAWNT ENSBTAP00000036344/1-1241 QATAVRCLDM SASRNKLAVV DENDMCLVYD IHTKELLFQE PNANSVAWNT bmy_00403T0/1-1110 QATAVRCLDM SASRNKLAVV DENDTCLVYD IHTKELLFQE PNANSVAWNT ENSTTRP00000010685/1-1263 QATAVRCLDM SASRNKLAVV DENDTCLVYD IHTKELLFQE PNANSVAWNT BACU015190/1-1285 QATAVRCLDM SASRNKLAVV DENDTCLVYD IHTKELLFQE PNANSVAWNT 651 700 ENSP00000296266/1-1292 QCEDMLCFSG GGYLNIKAST FPVHRQKLQG FVVGYNGSKI FCLHVFSISA ENSBTAP00000036344/1-1241 QCEDMLCFSG GGYLNIKAST FPVHQQKLQG FVVGYNGSKI FCLHVFSMSA bmy_00403T0/1-1110 QCEDMLCFSG GGYLNIKAST FPVHQQKLQG FVVGYNGSRI FCLHAFSMSA ENSTTRP00000010685/1-1263 QCEDMLCFSG GGYLNIKAST FPVHQQKLQG FVVGYNGSRI FCLHAFSMSA BACU015190/1-1285 QCEDMLCFSG GGYLNIKAST FPVHQQKLQG FVVGYNGSRI FCLHAFSMSA 701 750 ENSP00000296266/1-1292 VEVP------ -----QSAPM YQYLDRKLFK EAYQIACLGV TDTDWRELAM ENSBTAP00000036344/1-1241 VEVP------ -----QSAPM YQYLDRKMFR EAYQIACLGV TDADWRELAM bmy_00403T0/1-1110 VEVP------ -----QSAPM YQYLDRKMFR EAYQIACLGV TDTDWRELAM ENSTTRP00000010685/1-1263 VEVP------ -----QSAPM YQYLDRKMFR EAYQIACLGV TDTDWRELAM BACU015190/1-1285 VEVPQAVFFP FDEILQSAPM YQYLDRKMFR EAYQIACLGV TDTDWRELAM 751 800 ENSP00000296266/1-1292 EALEGLDFET AKKAFIRVQD LRYLELISSI EERKKRGETN NDLFLADVFS ENSBTAP00000036344/1-1241 EALEGLEFET AKKAFTRVQD LRYLELINSI EERKKRGETN NDLFLADVFS bmy_00403T0/1-1110 EALEGLEFET AKKAFTRVQD LRYLELINSI EERKKRGETN NDLFLADVFA ENSTTRP00000010685/1-1263 EALEGLEFET AKKAFTRVQD LRYLELINSI EERKKRGETN NDLFLADVFS BACU015190/1-1285 EALEGLEFET AKKAFTRVQD LRYLELINSI EERKKRGETN NDLFLADVFS 801 850 ENSP00000296266/1-1292 YQGKFHEAAK LYKRSGHENL ALEMYTDLCM FEYAKDFLGS GDPKETKMLI ENSBTAP00000036344/1-1241 YQGKFHEAAK LYKRSGHENL ALDMYTELRM FEYAKDFLGS EDPKETKMLI bmy_00403T0/1-1110 YQGKFHEAAK LYKRSGHENL ALDMYTDLRM FEYAKDFLGS GDPKETKMLI ENSTTRP00000010685/1-1263 YQGKFHEAAR LYKRSGHENL ALDMYTDLRM FEYAKDFLGS GDPKETKMLI BACU015190/1-1285 YQGKFHEAAK LYKRSGHENL ALDMYTDLRM FEYAKDFLGS GDPKETKMLI 851 900 ENSP00000296266/1-1292 TKQADWARNI KEPKAAVEMY ISAGEHVKAI EICGDHGWVD MLIDIARKLD ENSBTAP00000036344/1-1241 TKQADWARNI NEPKAAVEMY ISAGEHCKAI EISGEHGWVD MLIDIARKLD bmy_00403T0/1-1110 TKQADWARNI NEPKAAVEMY ISAGEHGKAI EISGDHGWVD TLIDIARKLD ENSTTRP00000010685/1-1263 TKQADWARNI NEPKAAVEMY ISAGEHGKAI EISGDHGWVD TLIDIARKLD BACU015190/1-1285 TKQADWARNI NEPKAAVEMY ISAGEHGKAI AISGDHGWVD TLIDIARKLD 901 950 ENSP00000296266/1-1292 KAEREPLLLC ATYLKKLDSP GYAAETYLKM GDLKSLVQLH VETQRWDEAF ENSBTAP00000036344/1-1241 KAEREPLLMC AHFFKKLDNP GYAAETYLKI GDLKSLVQLH VETQRWDEAF bmy_00403T0/1-1110 KAEREPLLMC AHYFKKLDNP GYAAETYLKI GDLKSLVQLH VETQRWDEAF ENSTTRP00000010685/1-1263 KAEREPLLMC AHYFKKLDNP GYAAETYLKI GDLKSLVHLH VDTQRWDEAF BACU015190/1-1285 KAEREPLLMC AHYFKKLDNP GYAAETYLKI GDLKSLVQLH VETQSWDEAF 951 1000 ENSP00000296266/1-1292 ALGEKHPEFK DDIYMPYAQW LAENDRFEEA QKAFHKAGRQ REAVQVLEQL ENSBTAP00000036344/1-1241 ALGEKHPEFK DDIYVPYAQW LAENDRFEEA QKAFHKAGRQ GEAVRVLEQL bmy_00403T0/1-1110 ALGEKHPEFK DDIYVPYAQW LAESDRFEEA QKAFHKAGRQ GEAVRVLEQL ENSTTRP00000010685/1-1263 ALGEKHPEFK DDIYVPYAQW LAENDRFEEA QKAFHKAGRQ GEAVRVLEQL BACU015190/1-1285 ALGEKHPEFK DDIYVPYAQW LAESDRFEEA QKAFHKAGRQ GEAVRVLEQL 1001 1050 ENSP00000296266/1-1292 TNNAVAESRF NDAAYYYWML SMQCLDIAQD PAQKDTMLGK FYHFQRLAEL ENSBTAP00000036344/1-1241 THNAVVESRF SDAAYYYWML SMQCLDIAQD PAQKEVMLSK FHHFQHLAEL bmy_00403T0/1-1110 THNAVVESRF NDAAYYYWML SMQCLDIAQD PAQKDVMLGK FHHFQHLAEL ENSTTRP00000010685/1-1263 THNAVVESRF NDAAYYYWML SMQCLDIAQD PAQKDVMLGK FHHFQHLAEL BACU015190/1-1285 THNAVVESRF NDAAYYYWML SMQCLDIAQD PAQKDVMLGK FHHFQHLAEL 1051 1100 ENSP00000296266/1-1292 YHGYHAIHRH TEDPFSVHRP ETLFNISRFL LHSLPKDTPS GISKVKILFT ENSBTAP00000036344/1-1241 YHGYHVIHRY VEEPFSFHLP ETLFNISRFL LHSLTKDTPL GISKVNTLFT bmy_00403T0/1-1110 YHGYHAIQRY TEEPFSFHLP ETLFNISRFL LHSLTKDTPL GISKVNTLFT ENSTTRP00000010685/1-1263 YHGYHAIQRY TEEPFSFHLP ETLFNISRFL LHSLTKDTPL GISKVNTLFT BACU015190/1-1285 YHGYHAIQRY TEEPFSFHLP ETLFNISRFL LHSLTKDTPL GISKVNTLFT 1101 1150 ENSP00000296266/1-1292 LAKQSKALGA YRLARHAYDK LRGLYIPARF QKSIELGTLT IRAKPFHDSE ENSBTAP00000036344/1-1241 LAKQSKALGA YKLARHAYDK LQGLQIPARF QKSIELGSLT IRSKPFHDSE bmy_00403T0/1-1110 LAKQSKALGA YKLARHAYDK LQGLQTPARF QKSIELGSLT IRSKPFHDSE ENSTTRP00000010685/1-1263 LAKQSKALGA YKLARHAYDK LQGLQTPARF QKSIELGSLT IRSKPFQDSE BACU015190/1-1285 LAKQSKALGA YKLARHAYDK LQGLQTPARF QKSIELGSLT IRSKPFHDSE 1151 1200 ENSP00000296266/1-1292 ELVPLCYRCS TNNPLLNNLG NVCINCRQPF IFSASSYDVL HLVEFYLEEG ENSBTAP00000036344/1-1241 ELVPLCYRCS TNNPLLNNLG NVCINCRQPF VFSASSYEVL HLVEFYLEEG bmy_00403T0/1-1110 ELVPLCYRCS TNNPLLNNLG NVCINCRQPF VFSASSYEVL HLVEFYLEEG ENSTTRP00000010685/1-1263 ELVPLCYRCS TNNPLLNNLG NVCINCRQPF VFSASSYEVL HLVEFYLEEG BACU015190/1-1285 ELVPLCYRCS TNNPLLNNLG NVCINCRQPF VFSASSYEVL HLVEFYLEAG 1201 1250 ENSP00000296266/1-1292 ITDEEAISLI DLEVLRPKRD DRQLEIANNS SQILRLVETK DSIGDEDPFT ENSBTAP00000036344/1-1241 ITDEEAVSLI DLEAPRLKRE NKWQEITSNN AQTLRLDESM DSVGDDDPFT bmy_00403T0/1-1110 ITDEEAVSLI DLEAPRHKRE NKWQEIASNS --ILGAGQTL CVSAERRPGS ENSTTRP00000010685/1-1263 ITDEEAISLI DLEAPRHKRE NKWQEIASNT SQTLRLDETL DSMGDDDPFT BACU015190/1-1285 ITDEEAVSLI DLEAPRHKRE NKWQEIASNT SQTLRLDETL DSLGDDDPFT 1251 1300 ENSP00000296266/1-1292 AKLSFEQGGS EFVPVVVSRL VLRSMSRRDV LIKRWPPPLR WQYFRSLLPD ENSBTAP00000036344/1-1241 AKLSFEQGGS EFVPVVVSRS VLRSMSRRDV LIKRWPPPLR WQYFRSLLPD bmy_00403T0/1-1110 TP-----GGR GLGG------ ---------- ---------- ---------- ENSTTRP00000010685/1-1263 AKLSFEQGGL EFVPVVVNRS VLRSMSRRDV LIKRWPPPLR WQYFRSLLPD BACU015190/1-1285 AKLSFE-GGL EFGPVVVTRS VLRSMSRRDV LVKRWPPPLR WQYFRSLLPD 1301 1350 ENSP00000296266/1-1292 ASITMCPSCF QMFHSEDYEL LVLQHGCCPY CRRCKDDPGP ENSBTAP00000036344/1-1241 ASITMCPSCF QMFHSEDYEL LLLQHTCCPY CRRRMDDPSP bmy_00403T0/1-1110 ---------- ---------- ---------- ---------- ENSTTRP00000010685/1-1263 ASITMCPSCF QMFHSEDYEL LVLQHTCCPY CRRRIDDPSP BACU015190/1-1285 ASITMCPSCF QMFHSEDYEL LVLQHTCCPY CRRRVDDPSP