KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:50 2014 Check: 00 .. Name: BACU015297/1-313 Len: 420 Check: 8437 Weight: 1.00 Name: ENSTTRP00000001304/1-389 Len: 420 Check: 5555 Weight: 1.00 Name: bmy_05073T0/1-312 Len: 420 Check: 4529 Weight: 1.00 Name: ENSP00000221200/1-389 Len: 420 Check: 8045 Weight: 1.00 Name: ENSBTAP00000036382/1-392 Len: 420 Check: 154 Weight: 1.00 // 1 50 BACU015297/1-313 MRRVTLFLNG SPKNGK---- ---------- ---------- ----VVAVYG ENSTTRP00000001304/1-389 MRRVTLFLNG SPKNGK---- ---------- ---------- ----VVAVYG bmy_05073T0/1-312 MRRVTLFLNG SPKNGKKAPV PTFVLSNGLL QKVAVTTKAY KIDQVVAVYG ENSP00000221200/1-389 MRRVTLFLNG SPKNGK---- ---------- ---------- ----VVAVYG ENSBTAP00000036382/1-392 MRRVTLFLNG SPKNGK---- ---------- ---------- ----VVAVYG 51 100 BACU015297/1-313 TLSDLLSVAS NKLGIKATSV YNGKGGLIDD IALIRDDDVL FVCEGEPFID ENSTTRP00000001304/1-389 TLSDLLSVAS NKLGIKATSV YNGKGGLIDD IALIRDDDVL FVCEGEPFID bmy_05073T0/1-312 TLSDLLSVAS NKLGIKATSV YNGKGGLIDD IALIRDDDVL FVCEGEPFID ENSP00000221200/1-389 TLSDLLSVAS SKLGIKATSV YNGKGGLIDD IALIRDDDVL FVCEGEPFID ENSBTAP00000036382/1-392 TLSDLLSVAS NKLGIKATSV YNGKGGLIDD IALIRDDDVL FVCEGEPFID 101 150 BACU015297/1-313 PQTDSKVPEG LSGSHTDWLT LNVGGRYFTT T---RSTLVN KEPDSMLAHM ENSTTRP00000001304/1-389 PQTDSKVPEV LXXXXXXXXX XXXXXXXXXX X---XSTLVN KEPDSMLAHM bmy_05073T0/1-312 PQTDSKVLEG LSGSHTDWLT LNVGGRYFTT T---RSTLVN KEPDSMLAHM ENSP00000221200/1-389 PQTDSKPPEG LLGFHTDWLT LNVGGRYFTT T---RSTLVN KEPDSMLAHM ENSBTAP00000036382/1-392 PQTDSKLPEG LSGSHTDWLT LNVGGRYFTT TRILRSTLVN KEPDSMLAHM 151 200 BACU015297/1-313 FKDKGVWGNK QDHRGAFLID RSPEYFEPIL NYLRHGQLIV NDGINLL--- ENSTTRP00000001304/1-389 FKDKGVWGNK QDHRGAFLID RSPEYFEPIL NYLRHGQLIV NDGINLLGVL bmy_05073T0/1-312 FKDKGVWGNK QDHRGAFLID RSPEYFEPIL NYLRHGQLIV NDGINLLGVL ENSP00000221200/1-389 FKDKGVWGNK QDHRGAFLID RSPEYFEPIL NYLRHGQLIV NDGINLLGVL ENSBTAP00000036382/1-392 FKDKGVWGNK QDHRGAFLID RSPEYFEPIL NYLRHGQLIV NDGINLLGVL 201 250 BACU015297/1-313 ---------- ---------- -ERPYKQLGG V--------- ---------- ENSTTRP00000001304/1-389 EEARFFGIDS LIEHLEVAIK NSQPPEDHSP ISRKEFVRFL LATPTKSELR bmy_05073T0/1-312 EEARFFGIDS LIEHLEVAIK NSQPPEDHSP ISRKEFVRFL LATPTKSELR ENSP00000221200/1-389 EEARFFGIDS LIEHLEVAIK NSQPPEDHSP ISRKEFVRFL LATPTKSELR ENSBTAP00000036382/1-392 EEARFFGIDS LIEHLEVAIK NSQPPEDHSP ISRKEFVRFL LATPTKSELR 251 300 BACU015297/1-313 CSSM------ -----MPFI- ---------- ---TGLSSLP FEK------- ENSTTRP00000001304/1-389 CQGLNFSGAD LSRLDLRYIN FKMANLSRCN LAHANLCCAN LERADLSGSV bmy_05073T0/1-312 CQGLNFSGAD LSRLDLRYIN FKMANLSRCN LAHANLCCAN LERADLSGSV ENSP00000221200/1-389 CQGLNFSGAD LSRLDLRYIN FKMANLSRCN LAHANLCCAN LERADLSGSV ENSBTAP00000036382/1-392 CQGLNFSGAD LSRLDLRYIN FKMANLSRCN LAHANLCCAN LERADLSGSV 301 350 BACU015297/1-313 -KCANLQGVK MLCSNAEGAS LKLCNFEDPS GLKANLEGAN LKGVDMEGSQ ENSTTRP00000001304/1-389 LDCANLQGVK MLCSNAEGAS LKLCNFEDPS GLKANLEGAN LKGVDMEGSQ bmy_05073T0/1-312 LDVRIIFGYK ---------- -RKLNF---- ---------- ---------- ENSP00000221200/1-389 LDCANLQGVK MLCSNAEGAS LKLCNFEDPS GLKANLEGAN LKGVDMEGSQ ENSBTAP00000036382/1-392 LDCANLQGVK MLCSNAEGAS LKLCNFEDPS GLKANLEGAN LKGVDMEGSQ 351 400 BACU015297/1-313 MTGINLRVAT LKNAKLKNCN LRGATLAGTD LENCDLSGCD LQEANLRGSN ENSTTRP00000001304/1-389 MTGINLRVAT LKNAKLKNCN LRGATLAGTD LENCDLSGCD LQEANLRGSN bmy_05073T0/1-312 ---------- ---------- ---------- ---------- ---------- ENSP00000221200/1-389 MTGINLRVAT LKNAKLKNCN LRGATLAGTD LENCDLSGCD LQEANLRGSN ENSBTAP00000036382/1-392 MTGINLRVAT LKNAKLKNCN LRGATLAGTD LENCDLSGCD LQEANLRGSN 401 450 BACU015297/1-313 VKGAIFEEML TPLHMSQSVR ENSTTRP00000001304/1-389 VKGAIFEEML TPLHMSQSVR bmy_05073T0/1-312 ---------- ---------- ENSP00000221200/1-389 VKGAIFEEML TPLHMSQSVR ENSBTAP00000036382/1-392 VKGAIFEEML TPLHMSQSVR