KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:50 2014 Check: 00 .. Name: BACU018909/1-258 Len: 289 Check: 2083 Weight: 1.00 Name: ENSTTRP00000009938/1-181 Len: 289 Check: 4460 Weight: 1.00 Name: ENSP00000351422/1-201 Len: 289 Check: 3459 Weight: 1.00 Name: bmy_02636T0/1-156 Len: 289 Check: 1445 Weight: 1.00 Name: ENSBTAP00000036391/1-180 Len: 289 Check: 1600 Weight: 1.00 // 1 50 BACU018909/1-258 XGKVSSKKAG TLMRKFGSDH TGVGRSIVYG VKQKDGQELS NDLDAQDPPE ENSTTRP00000009938/1-181 ---------- ---------- ---------- ---------- ---------- ENSP00000351422/1-201 ---------- ---------- ---------- ---------- ---------- bmy_02636T0/1-156 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036391/1-180 ---------- ---------- ---------- ---------- ---------- 51 100 BACU018909/1-258 DMKQDRDIQA VATSLLPLTE ANLLMFQRAQ EDLIPAVDRQ FACSSCDHVW ENSTTRP00000009938/1-181 ------MGRD LRGPSLPSAC AGVGSFRVTL RE-------- ------SNVL ENSP00000351422/1-201 -----MITET AAEPTVPAVP AAEEATEARG RE-------- ------EPAW bmy_02636T0/1-156 ----MITTEA AAESAVPAVP GDLEATGAPE RE-------- ------QLVW ENSBTAP00000036391/1-180 ----MITAEA ASESTVPAVP GDTAATGVPE RE-------- ------ELVW 101 150 BACU018909/1-258 --------WR RVPQRKEVSR CRKCR----- ------KRYE PVPSEKMWGV ENSTTRP00000009938/1-181 HTLGFGDTWR AFRWSMRVQG LRAGR----- ---------- ---------- ENSP00000351422/1-201 -------PWK DAPIRTLVQR IHQLQAERAQ GFRRLEEWLA PVQGLRAWGR bmy_02636T0/1-156 -------PWK DAAIRALVQR IHQLQ----- ---------- ---------- ENSBTAP00000036391/1-180 -------PWK DAPIRELVQR IHQLQ----- ---------- ---------- 151 200 BACU018909/1-258 AEFHCPKCRH NFRGWAQMGS RSPCYGCGFP VYPTRILPPR WDRDTDRRST ENSTTRP00000009938/1-181 -SLRIPACRR ---GHRQYLS SGPPY--DXX XXXXXX--XX XXXXXXXXXX ENSP00000351422/1-201 -GLRVPTCRR ---GHRQYLR SGPDY--DFA RYRSTV--HG VTQAFAAASR bmy_02636T0/1-156 -AERAQAFRR LEEGHRQYLS SGPPY--DFP RYRSTV--HE VTQAFAAASR ENSBTAP00000036391/1-180 -AERAQAFRR LEEGHRQYLS SGPPY--DFP RYRSTV--HE VTQVFAAASR 201 250 BACU018909/1-258 HTHSCSAEDC YNRREPHVPG TSCAHPKSRK QNHLPKVLHP SNLHISSGST ENSTTRP00000009938/1-181 XXXXXXXXXX XXXXXXXXXX ----XXXXXX XXXXXXXXXV ALLQLMGTPE ENSP00000351422/1-201 EVLAVEAELG GPRRQPLLAG ----HVRSLQ ELEQTRLGTV ALLQLMETPE bmy_02636T0/1-156 EVLAVEAELA GPRAQPLLAS ----HVRRLQ QLEETRLATV ALLQLMGTPE ENSBTAP00000036391/1-180 EVLAVEAELA GPRAQPLLAS ----HVRSLQ QLEETRLTTV ALLQLMGTPE 251 300 BACU018909/1-258 VA---TCLSQ GGL----LED LDNL--ILED LKEEEE--- ENSTTRP00000009938/1-181 LTGQ-DNLQM HQLKMKVIKT MEAISEVLQD LRFDAESAE ENSP00000351422/1-201 LAGQEDAVRM QQLKMKVIKT MEAISEVLQD LRFDAESAE bmy_02636T0/1-156 LTGQ-DSLQM HQLKMK---- ---------- --------- ENSBTAP00000036391/1-180 LTGQEDSLQM HQLKMKVIKT MEAISEVLQD LRFDAESAE