KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:50 2014 Check: 00 .. Name: ENSTTRP00000011252/1-362 Len: 362 Check: 1268 Weight: 1.00 Name: ENSP00000261875/1-362 Len: 362 Check: 1977 Weight: 1.00 Name: ENSBTAP00000036401/1-362 Len: 362 Check: 2901 Weight: 1.00 Name: bmy_12699T0/1-307 Len: 362 Check: 6031 Weight: 1.00 Name: BACU001070/1-325 Len: 362 Check: 6251 Weight: 1.00 // 1 50 ENSTTRP00000011252/1-362 MENQVLTPHV YWAQRHRELY LRVELSDVQN PAISITENVL HFKXXXXXXX ENSP00000261875/1-362 MENQVLTPHV YWAQRHRELY LRVELSDVQN PAISITENVL HFKAQGHGAK ENSBTAP00000036401/1-362 MENQVLTPHV YWAQRHHELY LRVELSDVQN PAISITENVL HFKAQGHGAK bmy_12699T0/1-307 MENQVLTPHV YWAQRHRELY LRVELSDVQN PAISITENVL HFKAQGHGAK BACU001070/1-325 MENQVLTPHV YWAQRHRELY LRVELSDVQN PAISITENVL HFKAQGHGAK 51 100 ENSTTRP00000011252/1-362 XXXXXXXXXX XXXXXXXXLV YKLTQRQVNI TVQKKVSQWW ERLTKQEKRP ENSP00000261875/1-362 GDNVYEFHLE FLDLVKPEPV YKLTQRQVNI TVQKKVSQWW ERLTKQEKRP ENSBTAP00000036401/1-362 GDNVYEFHLE FLDLVKPEPV YKLTQRQVNI TVQKKESQWW ERLTKQEKRP bmy_12699T0/1-307 GDNVYGFHLE FLDLVKPELV YKLTQRQVNI TVQKKVSQWW ERLTKQEKRP BACU001070/1-325 GDNVYEFHLE FLDLVKPELV YKLTQRQVNI TVQKKVSQWW ERLTKQEKRP 101 150 ENSTTRP00000011252/1-362 LFLAPDFDRW LDESDAEMEL RAKEEERLNK LRIESQGSPE TLASLKKGYL ENSP00000261875/1-362 LFLAPDFDRW LDESDAEMEL RAKEEERLNK LRLESEGSPE TLTNLRKGYL ENSBTAP00000036401/1-362 LFLAPDFDRW LDESDAEMEL RAKEEEQLNK LRLESQGSPE TLTSLKKGYL bmy_12699T0/1-307 LFLAPDFDRW LDESDAEMEL RAK------- ---------- ---------- BACU001070/1-325 LFLAPDFDRW LDESDAEMEL RAKEEERLNK LRIESQGSPE ---------- 151 200 ENSTTRP00000011252/1-362 FMYNLVQFLG FSWIFVNMTV RFLILGKESF YDTFHTVADM MYFCQMLAVV ENSP00000261875/1-362 FMYNLVQFLG FSWIFVNLTV RFCILGKESF YDTFHTVADM MYFCQMLAVV ENSBTAP00000036401/1-362 FMYNLVQFLG FSWIFVNMTV RFFILGKESF YDTFHTVADM MYFCQMLAAV bmy_12699T0/1-307 ---------- ---------- --------SF YDTFHTVADM MYFCQMLAVV BACU001070/1-325 ---------- ---------- -------KSF YDTFHTVADM MYFCQMLAVV 201 250 ENSTTRP00000011252/1-362 EAINAAIGVT KSPVIPSLFQ LLGRNFILFI IFGTMEEMQN KAVVFFVFYI ENSP00000261875/1-362 ETINAAIGVT TSPVLPSLIQ LLGRNFILFI IFGTMEEMQN KAVVFFVFYL ENSBTAP00000036401/1-362 ESINAAIGVT KSPVVPSLFQ LLGRNFILFI IFGTMEEMQN KAVVFFVFYI bmy_12699T0/1-307 EAINAAIGVT KSSVIPSLFQ LLGRNFILFI VFGTMEEMQN KAVVFFVFYV BACU001070/1-325 EAINAAIGVT KSSVIPSLFQ LLGRNFILFI VFGTMEEMQN KAVVFFVFYI 251 300 ENSTTRP00000011252/1-362 WSTAEILRYP FYMLSCIDMD WKVLTWLRYT MWIPLYPLGC LAEAVSVIQS ENSP00000261875/1-362 WSAIEIFRYS FYMLTCIDMD WKVLTWLRYT LWIPLYPLGC LAEAVSVIQS ENSBTAP00000036401/1-362 WSTVEIFRYP FYMLSCIDMD WKVLTWLRYT VWIPLYPMGC LAEAVSVIQS bmy_12699T0/1-307 WSTAEILRYP FYMLSCIDMD WKVLTWLRYT MWIPLYPLGC LAEAVSVIQS BACU001070/1-325 WSTAEILRYP FYMLSCIDMD WKVLTWLRYT MWIPLYPLGC LAEAVSVIQS 301 350 ENSTTRP00000011252/1-362 IPIFNETGRF SFTLPYPVKI KVRFSFFLQI YLIILFLGLY INFRHLYKQR ENSP00000261875/1-362 IPIFNETGRF SFTLPYPVKI KVRFSFFLQI YLIMIFLGLY INFRHLYKQR ENSBTAP00000036401/1-362 IPVFNETGRF SFTLPYPVKI KVRFSFFLQI YLILLFLGLY VNFRYLYKQR bmy_12699T0/1-307 IPIFNETGRF SFTLPYPVKI KVRFSFFLQI YLIILFLGLY INFRHLYKQR BACU001070/1-325 IPIFNETGRF SFTLPYPVKI KVRFSFFLQI YLIILFLGLY INFRHLYKQR 351 400 ENSTTRP00000011252/1-362 RRRFGQKKKK IH ENSP00000261875/1-362 RRRYGQKKKK IH ENSBTAP00000036401/1-362 RRRFGQKKKK IH bmy_12699T0/1-307 RRRFGQKKKK IH BACU001070/1-325 RRRFGQKKKK IH