KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:51 2014 Check: 00 .. Name: BACU015302/1-435 Len: 948 Check: 3420 Weight: 1.00 Name: ENSP00000221166/1-916 Len: 948 Check: 9383 Weight: 1.00 Name: ENSTTRP00000006166/1-800 Len: 948 Check: 2353 Weight: 1.00 Name: bmy_17347T0/1-840 Len: 948 Check: 5340 Weight: 1.00 Name: ENSBTAP00000036438/1-926 Len: 948 Check: 8798 Weight: 1.00 // 1 50 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 MSYTLDSLGN PSAYRRVTET RSSFSRVSGS PSSGFRSQSW SRGSPSTVSS ENSTTRP00000006166/1-800 MSYTLDSLGN PSAYRRVTDT RSSFSRVGGS PSSGFRSQSW SRGSPSTVSS bmy_17347T0/1-840 MSYTLDSLGN PSAYRRVTDT RSSFSRVSGS PSSGFRSQSW SRGSPSTVSS ENSBTAP00000036438/1-926 MSYTLDSLGN PSAYRRVTET RSSFSRISGS PSSGFRSQSW SRGSPSTVSS 51 100 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 SYKRSMLAPR LAYSSAMLSS AESSLDFSQS SSLLNGGSGP GGDYKLSRSN ENSTTRP00000006166/1-800 SYKRSALAPR LTYSSAMLSS AESSLDFSQS SSLLNGGSGP GGDYKLSRSN bmy_17347T0/1-840 SYKRSALAPR LAYSSAMLSS AESSLDFSQS SSLLNGGSGP GGDYKLSRSN ENSBTAP00000036438/1-926 SYKRSALAPR LTYSSAMLSS AESSLDFSQS SSLLNGGSGP GGDYKLSRSN 101 150 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 EKEQLQGLND RFAGYIEKVH YLEQQNKEIE AEIQALRQKQ ASHAQLGDAY ENSTTRP00000006166/1-800 ENEQLQGLND RFAGYIEKVH YLQQQIKEIE AEIQALRQ-Q ASHAQLGDAY bmy_17347T0/1-840 EKEQLQGLND RFAGYIEKVH YLEQQNKEIE VEIQALRQKQ ASHAQLGDAY ENSBTAP00000036438/1-926 EKEQLQGLND RFAGYIEKVH YLEQQNKEIE AEIQALRQKQ ASHAQLGDAY 151 200 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 DQEIRELRAT LEMVNHEKAQ VQLDSDHLEE DIHRLKERFE EEARLRDDTE ENSTTRP00000006166/1-800 DQEIRELRAX XXXXXXXX-- ---------- ---------- ---------- bmy_17347T0/1-840 DQEIRELRAT LELVNHEKAQ VQLDSDHLEE DIHRLKERFE EEARLRDDTE ENSBTAP00000036438/1-926 DQEIRELRAT LEMVNHEKAQ VQLDSDHLEE DIHRLKERFE EEARLRDDTE 201 250 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 AAIRALRKDI EEASLVKVEL DKKVQSLQDE VAFLRSNHEE EVADLLAQIQ ENSTTRP00000006166/1-800 ---------- ---------- -XXVQSLQDE VAFLRSNHEE EVADLLAQIQ bmy_17347T0/1-840 AAIRALRKDI EESSLVKVEL DKKVQSLQDE VAFLRSNHEE EVADLLGQIQ ENSBTAP00000036438/1-926 AAIRALRKDI EESSLVKVEL DKKVQSLQDE VAFLRSNHEE EVADLLAQIQ 251 300 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 ASHITVERKD YLKTDISTAL KEIRSQLESH SDQNMHQAEE WFKCRYAKLT ENSTTRP00000006166/1-800 ASHITVERKD YLKTDISSAL KEIRSQLECH SDQNMHQAEE WFKCRYAKLT bmy_17347T0/1-840 ASHVTVERKD YLKTDISSAL KEIRSQLECH SDQNMHQAEE WFKCRYAKLT ENSBTAP00000036438/1-926 ASHITVERKD YLKTDISTAL KEIRSQLESH SDQNMHQAEE WFKCRYAKLT 301 350 BACU015302/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000221166/1-916 EAAEQNKEAI RSAKEEIAEY RRQLQSKSIE LESVRGTKES LERQLSDIEE ENSTTRP00000006166/1-800 EAAEQNKEAI RSAKEEIAEY RRQLQSKSIE LESVRGTKES LERQLSDIEE bmy_17347T0/1-840 EAAEQNKEAI RSAKEEIAEY RRQLQSKSIE LES------- ---------- ENSBTAP00000036438/1-926 EAAEQNKEAI RSAKEEIAEY RRQLQSKSIE LESVRGTKES LERQLSDIEE 351 400 BACU015302/1-435 ---------- ---------- ------MARH LREYQDLLNV KMALDIEIAA ENSP00000221166/1-916 RHNHDLSSYQ DTIQQLENEL RGTKWEMARH LREYQDLLNV KMALDIEIAA ENSTTRP00000006166/1-800 RHNHDLSSYQ DTIQQLENEL RGTKWEMARH LREYQDLLNV KMALDIEIAA bmy_17347T0/1-840 ---------- DTIQQLENEL RGTKWEMARH LREYQDLLNV KMALDIEIAA ENSBTAP00000036438/1-926 RHNHDLSSYQ DTIQQLENEL RGTKWEMARH LREYQDLLNV KMALDIEIAA 401 450 BACU015302/1-435 YRKLLEGEET RFSTFAGSIT GPLYTHRQPS ITISSKFQKT KVEAPKLKVQ ENSP00000221166/1-916 YRKLLEGEET RFSTFAGSIT GPLYTHR-PP ITISSKIQKP KVEAPKLKVQ ENSTTRP00000006166/1-800 YRKLLEGEET RFSTFAGSIT GPLYTHRQPS ITISSKIQKT KVEAPKLKVQ bmy_17347T0/1-840 YRKLLEGEET RFSTFAGSIT GPLYTHRQPS ITISSKFQKT KVEAPKLKVQ ENSBTAP00000036438/1-926 YRKLLEGEET RFSTFAGSIT GPLYTHRQPS IAISSKIQKT KVEAPKLKVQ 451 500 BACU015302/1-435 HKFVEEIIEE TKVEDEKSEM EEALTAIAEE LTVSMKEEGK EEEAEEKKEK ENSP00000221166/1-916 HKFVEEIIEE TKVEDEKSEM EEALTAITEE LAVSMKEE-K KEAAEEKEEE ENSTTRP00000006166/1-800 HKFVEEIIEE TKVEDEKSEM EEALTAIAEE LTVSMKEEVK EEEAEEKKEE bmy_17347T0/1-840 HKFVEEIIEE TKVEDEKSEM EEALTAIAEE LTVSMKEEGK EEEAEEKKEK ENSBTAP00000036438/1-926 HKFVEEIIEE TKVEDEKSEM EEALTAITEE LAVSVKEEVK EEEAEEKEEK 501 550 BACU015302/1-435 KEAEEEVVAA KKSPVKAIAP ELKG-----E EEEGR-EEEE EEEGAKSDQA ENSP00000221166/1-916 PEAEEEEVAA KKSPVKATAP EVKEEEGEKE EEEGQEEEEE EDEGAKSDQA ENSTTRP00000006166/1-800 KEAEEEVVAA KKSPVKATAP ELKG------ EEEG--EEEE EEEGAKSDQA bmy_17347T0/1-840 KEAEEEVVAA KKSPVKAIAP ELKG-----E EEEGR-EEEE EEEGAKSDQA ENSBTAP00000036438/1-926 EEAEEEVVAA KKSPVKATAP ELKEEEGEKE EEEGQEEEEE EEEAAKSDQA 551 600 BACU015302/1-435 EEGGSEKEVS SEKEEGEQEE EGETEPEGEG EE-AAEAKEE KKMEEKGEEV ENSP00000221166/1-916 EEGGSEKEGS SEKEEGEQ-E EGETEAEAEG EE--AEAKEE KKVEEKSEEV ENSTTRP00000006166/1-800 EEGGSEKEVS SEKEEGEQEE EGETEAEGEG EE-AAEAKEE KKMEAKGEEV bmy_17347T0/1-840 EEGGSEKEVS SGKEEGEQEE EGETEPEGEG EE-AAEAKEE KKMEEKGEEV ENSBTAP00000036438/1-926 EEGGSEKEGS SEKEEGEQEE EGETEAEGEG EEAAAEAKEE KKMEEKAEEV 601 650 BACU015302/1-435 SPKEELVAEA KVEKPEQARS PV-------- ---------- ---------- ENSP00000221166/1-916 ATKEELVADA KVEKPEKAKS PVPKSPVEEK GKSPVPKSPV EE----KGKS ENSTTRP00000006166/1-800 APKEELVAEA KVEKPEQAKS PV-------- ---------- ---------- bmy_17347T0/1-840 APKEELVAEA KVEKPEQAKS PV-------- ---------- ---------- ENSBTAP00000036438/1-926 APKEELAAEA KVEKPEKAKS PVAKSPTTKS PTAKSPEAKS PEAKSPTAKS 651 700 BACU015302/1-435 ---------- ---------- ---------- ---------- --PESPVEEG ENSP00000221166/1-916 PVPKSPVEEK GKSPVPKS-P VEEKGKSPVS KSPVEEKAKS PVPKSPVEEA ENSTTRP00000006166/1-800 ---------- ---------- ---------- ---------- --PKSPVEEV bmy_17347T0/1-840 ---------- ---------- ---------- ---------- --PKSPVEEV ENSBTAP00000036438/1-926 PTAKSPVAKS PTAKSPTAKS PEAKSPTAKS PTAKSPAAKS PAAKSPVEEV 701 750 BACU015302/1-435 KPKAEAGAEK GEQKEEEGKV EGAKKEEAKE APKEEKGEKK EEKRKDVPEK ENSP00000221166/1-916 KSKAEVG--K GEQKEEEEK- ------EVKE APKEEKVEKK EEKPKDVPEK ENSTTRP00000006166/1-800 KPKAEAAAEK GEQKEEEGKV EEAKKEEAKE APKEEKAEKK EEKPKEVPEK bmy_17347T0/1-840 KPKAEAGAEK GEQKEEEGKV EEEKKEEAKE APKEEKGEKK EEKPKDVPEK ENSBTAP00000036438/1-926 KPKAEAGAEK GEQKE---KV EEEKK-EAKE SPKEEKAEKK EEKAKDVPEK 751 800 BACU015302/1-435 KKAESPVKEG --VVGEAA-- ARPAKVSWEK EAKEEEKPQQ REK------- ENSP00000221166/1-916 KKAESPVKEE --AVAEVVTI TKSVKVHLEK ETKEEGKPLQ QEK------- ENSTTRP00000006166/1-800 KKAESPVKEE --VVEEVV-- AKSAKVSLEK DAKEEEKPQQ QEK------- bmy_17347T0/1-840 KKAESPVKEE --VVEEAV-- AKSVKVSLEK DAKEEEKPQQ QEKEKEEKEK ENSBTAP00000036438/1-926 KKAESPVKAE SPVKEEVP-- AKPVKVSPEK EAKEEEKPQ- ---------- 801 850 BACU015302/1-435 ----EKETEK EKETEKEKET EKEKETEKEK ETEKEKETEK EKETEKEEKE ENSP00000221166/1-916 ----EKEKAG GEGGSEEEGS DKGAKGSRKE DIAVNGEVEG KEEVEQETKE ENSTTRP00000006166/1-800 ----EKEKEG EGESEVGKKE EGALKDSRKE DIAVNGEVEG KDEVEPEAKE bmy_17347T0/1-840 EKEKEKEKEK KKAEEVGKKE EGGLKDSRKE DIAINGEVEG KEEHXQEAKE ENSBTAP00000036438/1-926 ----EKEKEK EKVEEVGGKE EGGLKESRKE DIAINGEVEG KEE-EQETKE 851 900 BACU015302/1-435 KEKEEKEKE- --------KE EKEKEKEEKE KEK------- ---EDAGSQG ENSP00000221166/1-916 KGSGREEEKG VVTNGLDLSP ADEKKGGDKS EEKVVVTKTV EKITSEGGDG ENSTTRP00000006166/1-800 KGSGGEEKKG VVTNGLDVSP ADEKKGGDRG EEKAAVTKMV EKTTSERGDG bmy_17347T0/1-840 KGSGGEEKKG VVTNGLDLSP ADEKKGGDRG EEKVVVTKMV DKTTSEGGDG ENSBTAP00000036438/1-926 KGSGGEEEKG VVTNGLDVSP GDEKKGGDKS EEKVVVTKMV EKITSEGGDG 901 950 BACU015302/1-435 EGQW------ --GRREERGC HQRARLEPSR ---------- -------- ENSP00000221166/1-916 ATKYITKSVT VTQKVEEHEE TFEEKLVSTK KVEKVTSHAI VKEVTQSD ENSTTRP00000006166/1-800 ATKYITKSVT VTQKVEQHEE TFEEKSVSTK KVEKVTSHAV VKEVTQSD bmy_17347T0/1-840 ATKYITKSVT VTQKVEEHEE TFEEKLVSTK KVEKVTSHAV VKEVTQSD ENSBTAP00000036438/1-926 ATKYITKSVT VTQKVEEHEE TFEEKLVSTK KVEKVTSHAI VKEVTQSD