KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:46:52 2014 Check: 00 .. Name: ENSP00000289921/1-743 Len: 1208 Check: 4661 Weight: 1.00 Name: ENSBTAP00000036449/1-739 Len: 1208 Check: 2661 Weight: 1.00 Name: ENSTTRP00000011411/1-726 Len: 1208 Check: 2822 Weight: 1.00 Name: bmy_00956T0/1-799 Len: 1208 Check: 1122 Weight: 1.00 Name: BACU001994/1-1132 Len: 1208 Check: 7937 Weight: 1.00 // 1 50 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 MPPGGCPRCR TPGPQRPREA LPCPTPSLRL ALAPTHIPTR PPSRSPQQPL 51 100 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 TSPGSVSSSR GSSVPGSPSS IVAKMDNQVM GYKDLAAIPK DKAILDIERP 101 150 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 DLMIYEPHFT YSLLEHVELP RSRERSLSPK STSPPPSPEV WAESRSPGTI 151 200 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 SQASAPRTTG TPRTSLPHFH HPETTRPDSN IYKKPPIYKQ KESTGGSPQS 201 250 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 KHLIEDLIIE SSKFPAAQPP DPNQPAKIET DYWPCPPSLA VVETEWRKRK 251 300 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 ASRRGAEEEE EEEDDDSGEE MKALRERQRE ELSKVTSNLG KMILKEEMEK 301 350 ENSP00000289921/1-743 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036449/1-739 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- ---------- ---------- bmy_00956T0/1-799 ---------- ---------- ---------- ---------- ---------- BACU001994/1-1132 SLPIRRKTRS LPDRTPFHTS LHVGTSKSSS LPAYGRTTLS RLQSTDFSPS 351 400 ENSP00000289921/1-743 ---------- ---------- MLSRLGALLQ EAVG------ ---------- ENSBTAP00000036449/1-739 ---------- ---------- MLSRLGALLQ EAVG------ ---------- ENSTTRP00000011411/1-726 ---------- ---------- ---------- EAMG------ ---------- bmy_00956T0/1-799 ---------- ---------- -----LCLLS P--------- ---------- BACU001994/1-1132 GSETESPGLQ NGEGQRGRMD RGNSLPCVLE QKIYPYEMLV VTNRGRTKLP 401 450 ENSP00000289921/1-743 --------AR EPSIDLLQAF VEHWKGITHY YIESTDESTP AKKTDIPWRL ENSBTAP00000036449/1-739 --------AR EPSIDLLEAF VEHWKGITNY YIESTDENTP AKKTDIPWRL ENSTTRP00000011411/1-726 --------AR EPSIDLLEAF VEHWKGITNY YIESTDENTP AKKTDIPWRL bmy_00956T0/1-799 --------QR EPSIDLLEAF VEHWKGITNY YIESTDENTP AKKTDIPWRL BACU001994/1-1132 PGVDRMRLER EPSIDLLEAF VEHWKGITNY YIESTDENTP AKKTDIPWRL 451 500 ENSP00000289921/1-743 KQMLDILVYE EQQQAAAGEA GPCLEYLLQH KILETLCTLG KAEYPPGMRQ ENSBTAP00000036449/1-739 KQMLDILVYE EKQQAAAGET GPCLEYLLQH KILETLCTLG KAEYPPGMRQ ENSTTRP00000011411/1-726 KQMLDILVYE EKQQAAAGEA GPCLEYLLQH KILETLCTLG KAEYPPGMRQ bmy_00956T0/1-799 KQMLDILVYE EKQQAAAGEA GPCLEYLLQH KILETLCTLG KAEYPPGMRQ BACU001994/1-1132 KQMLDILVYE EKQQAAAGEA GPCLEYLLQH KILETLCTLG KAEYPPGMRQ 501 550 ENSP00000289921/1-743 QVFQFFSKVL AQVQHPLLHY LSVHRPVQKL LRLGGTASGS VTEKEEVQFT ENSBTAP00000036449/1-739 QVLQFFSKVL AQVQHPLLHY LNVHRPVQKL LRLGGTVPGS LTEKEEVQFT ENSTTRP00000011411/1-726 QVLQFFSKVL AQVQHPLLHY LSVHRPVQKL LRLGGTVPGS LTEKEEVQFT bmy_00956T0/1-799 QVLQFFSKVL AQVQHPLLHY LSVHRPVQKL LRLGGTVPGS LTEKEEVQFT BACU001994/1-1132 QVLQFFSKVL AQVQHPLLHY LSVHRPVQKL LRLGGTVPGS LTEKEEVQFT 551 600 ENSP00000289921/1-743 TVLCSKIQQD PELLAYILE- ---------- ---------- ---------- ENSBTAP00000036449/1-739 TVLCSKIQQD PALLTYILE- ---------- ---------- ---------- ENSTTRP00000011411/1-726 TVLCSKIQQD PALLTYILE- ---------- ---------- ---------- bmy_00956T0/1-799 TVLCSKIQQD PALLTYILEV SASGEQEREG LDPGQSPVAL LKKQKDGAGT BACU001994/1-1132 TVLCSKIQQD PALLTYILE- ---------- ---------- ---------- 601 650 ENSP00000289921/1-743 ---------- ---------- ---------- --------GK KIVGRKKACG ENSBTAP00000036449/1-739 ---------- ---------- ---------- --------GK KTIGRK-ASR ENSTTRP00000011411/1-726 ---------- ---------- ---------- --------GR KTVGRKEASR bmy_00956T0/1-799 GEVLRQLPLQ LHATLYSQGA NRGGCSAPQP GLTQPPLQGK KTVGRKEASR BACU001994/1-1132 ---------- ---------- ---------- --------GK KTVGRKEASR 651 700 ENSP00000289921/1-743 EPTALPKDTT SHGDKDCSHD GAPARPQLDG ESCGAQALNS HMPAETEELD ENSBTAP00000036449/1-739 EATAPLREAA SVRDKDRPHI KAP-----DN GTCGAWASSA QLPAETEEPD ENSTTRP00000011411/1-726 EATALPREAA GVKNEEQPHS KAP-----DR GARGARALST QLPAETEEPD bmy_00956T0/1-799 EATALPREAA GIKNEEQPHS KAP-----DR GAWGARALST QLPAETEQPD BACU001994/1-1132 EATALPREAA GIKNEEQPHS KAP-----DR GACGARALSP QLPAETEQPD 701 750 ENSP00000289921/1-743 GGTTESNLIT SLLGLCQSKK SRVALKAQEN LLLLVSMASP AAATYLVQSS ENSBTAP00000036449/1-739 GAIGESSLIT TLIGLCKSKK GRVALKAREN LLLLVSVASQ AAATYLVQSS ENSTTRP00000011411/1-726 GGPGESTLIT SL-GLCKSKR ARVALKAQEN LLLLVSVASQ AAATYLVQSS bmy_00956T0/1-799 GGTGESNLIT SLIGLCKSKK GRVALKAQEN LLLLVSVASQ AAATYLVQSS BACU001994/1-1132 GGTGESNLIT SLIGLCKSKK GRVALKAQEN LLLLVSVASQ AAATYLVQSS 751 800 ENSP00000289921/1-743 ACCPAIVRHL CQLYRSMPVF LDPADIATLE GISWRLPSAP SDEASFPGKE ENSBTAP00000036449/1-739 PCCPAIIEYL CQLYQSLPSS LDPADIAALE GISWRLPSAP SDEASFPGKE ENSTTRP00000011411/1-726 PCCPAIVEHL CQLYQSLPSF LDPADIATSE GISWRLPSAQ SDEAS-SGKE bmy_00956T0/1-799 PCCPAIVEHL CQLYQSLPSF LDPADIAALE GISWRLPSAP SDEASFPGKE BACU001994/1-1132 PCCPAIVEHL CQLYQSLPSF LDPADIAALE GISWRLPSAP SDEASFPGKE 801 850 ENSP00000289921/1-743 ALAAFLGWFD YCDHLITEAH TVVADALAKA VAENFFVETL QPQLLHVSEQ ENSBTAP00000036449/1-739 ALAAFLGWFD YCDHLITEAH TVVSDALAKA VAEKLFVEIL QPQLLHVSEQ ENSTTRP00000011411/1-726 TLAAFLGWFD YCDHLITEAH TVVSEALAKS VAEKLFVEIL QPQLLHVSEQ bmy_00956T0/1-799 TLAAFLGWFD YCDHLITEAH TVVSDALAKS VAEKLFVEIL QPQLLHVSEQ BACU001994/1-1132 TLAAFLGWFD YCDHLITEAH TVVSDALAKS VAEKLFVEIL QPQLLHVSEQ 851 900 ENSP00000289921/1-743 SILTSTALLT AMLRQLRSPA LLREAVAFLL GTDRQPEAPG DNPHTLYAHL ENSBTAP00000036449/1-739 SVLMSTALLT VMLRQLRSPA LLQEAVAFLL GMDQQPAAPE DSPRTLCTHL ENSTTRP00000011411/1-726 SILTSTALLT AMLRQLRSPA LLREAVAFLL GTDQQPAAPE DSPHTLGGHL bmy_00956T0/1-799 SVLTSTALLT AMLRQLRSPA LLREAVAFLL GTDQQPAAPE DSPHTLGGHL BACU001994/1-1132 SVLTSTALLT AMLRQLRSPA LLREAVAFLL GTDQQPAAPE DSPHTLGGHL 901 950 ENSP00000289921/1-743 IGHCDHLSDE ISITTLRLFE ELLQKPHEGI IHSLVLRNLE GRPYVAWGSP ENSBTAP00000036449/1-739 IRHCDHLSDE ISIATLRLFE ELLQKPHEHI VRSLILCHLE GRSYVARGSP ENSTTRP00000011411/1-726 VRHCDHLSDE ISIATLRLFE ELLQKPHEQI IHSLILCHLE GRPYVARGSP bmy_00956T0/1-799 VRHCDHLSDE ISIATLRLFE ELLQKPHEQI IHSLILCHLE GRPYVARGSP BACU001994/1-1132 VRHCDHLSDE ISIATLRLFE ELLQKPHEQI IHSLILCHLE GRPYVARGSP 951 1000 ENSP00000289921/1-743 EPESYEDTL- -DLEEDPYFT DSFLDSGFQT PAKPRLAPAT SYDGKTAVTE ENSBTAP00000036449/1-739 EPESYEDTLH RDLEEDPYFT DSFLDSGFQP SVKPPPAPAT NPDGKTAVTE ENSTTRP00000011411/1-726 EPESYEDTL- -DLEEDPYFT DGFLDSGFQP SMKPPPAPVT NPDGKTAVTE bmy_00956T0/1-799 EPESYEDTL- -DLEEDPYFT DGFLDSGFQP SMKPPPAPIT NPDGKTAVTE BACU001994/1-1132 EPESYEDTL- -DLEEDPYFT DGFLDSSFQP SMKPPPAPVT NPDGKTAVTE 1001 1050 ENSP00000289921/1-743 IVNSFLCLVP EEAKTSAFLE ETGYDTYVHD AYGLFQECSS RVASWGWPLT ENSBTAP00000036449/1-739 IVNSFLCLVP EEAKTSAFLE ETGYDTYVHD AYGLFQECSS RVTPWGWPLA ENSTTRP00000011411/1-726 IVNSFLCLVP EEAKTSAFLE ETGYDTYVHD AYGLFQECSS RVAPWGWPPA bmy_00956T0/1-799 IVNSFLCLVP EEAKTSAFLE ETGYDTYVHD AYGLFQECRS RVAPWGWPPA BACU001994/1-1132 IVNSFLCLVP EEAKTSAFLE ETGYDTYVHD AYGLFQECSS RVAPWGWPPA 1051 1100 ENSP00000289921/1-743 PTPLDPHEPE RPFFEGHFLR VLFDRMSRIL DQPYSLNLQV TSVLSRLALF ENSBTAP00000036449/1-739 PPPLDPHEPE RPFFEGPFLQ MLFDRMSRIL EQPYSLNLQV TSVLSRLALF ENSTTRP00000011411/1-726 LPPLDPHEPE RPFFEGHFLR MLFDRISRIL EQPYSLNLQV TSVLSRLALF bmy_00956T0/1-799 PTPLDPHEPE RPFFEGHFLR MLFDRISRIL EQPYSLNLQV TSVLSRLALF BACU001994/1-1132 PTPLDPHEPE RPFFEGHFLR MLFDRMSRIL EQPYSLNLQV TSVLSRLALF 1101 1150 ENSP00000289921/1-743 PHPHIHEYLL DPYISLAPGC RSLFSVLVRV IGDLMQRIQR VPQFPGKLLL ENSBTAP00000036449/1-739 PHPLIHEYLL DPYTNLAPGC RSLFSVLVRV IGDLMQRIQR VPQFPGKLLL ENSTTRP00000011411/1-726 PHPLIHEYLL DPYINLAPGC RSLFSVLVRV IGDLMQRIQR VPQFPGKLLL bmy_00956T0/1-799 PHPLIHEYLL DPYINLAPGC RSLFSVLVRV IGDLMQRIQR VPQFPGXLLL BACU001994/1-1132 PHPLIHEYLL DPYINLAPGC RSLFSVLVRV IGDLMQRIQR VPQFPGKLLL 1151 1200 ENSP00000289921/1-743 VRKQLTGQAP GEQLDHQTLL QGVVVLEEFC KELAAIAFVK FPPHDPRQNV ENSBTAP00000036449/1-739 VRRQLMGQVP GEQLDHQTFL QGVVVLEEFC KELAAIAFVK FPPHGPRLHP ENSTTRP00000011411/1-726 VRRQLMGQVP GEQLDHQTLL QGVVVLEEFC KELAAIAFVK FPPHGPHLRL bmy_00956T0/1-799 VRRQLMGQVP GEQLDHQTLL QGVVVLEEFC KELAAIAFVK FPPHGPHLRL BACU001994/1-1132 VRRQLMGQVP GEQLDHQTLL QGVVVLEEFC KELAAIAFVK FPPHGPHLRL 1201 1250 ENSP00000289921/1-743 SPAPEGQV ENSBTAP00000036449/1-739 SKPPEGHV ENSTTRP00000011411/1-726 SEPPEGHV bmy_00956T0/1-799 SEPPEGHV BACU001994/1-1132 SEPPEGHV