KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:00 2014 Check: 00 .. Name: ENSP00000299290/1-351 Len: 373 Check: 2964 Weight: 1.00 Name: bmy_16720T0/1-292 Len: 373 Check: 4817 Weight: 1.00 Name: ENSTTRP00000006813/1-351 Len: 373 Check: 259 Weight: 1.00 Name: ENSBTAP00000036511/1-333 Len: 373 Check: 8106 Weight: 1.00 // 1 50 ENSP00000299290/1-351 MATDV--QLA DYPLM----- -------SPK AELKLEKKSG RKPRSPRDSG bmy_16720T0/1-292 MDSN---KLR WAPLPGGSIC FSLTLSFSPR AEPKPEKKSG CRPRSHADGG ENSTTRP00000006813/1-351 MATEVRTQLA EHPLT----- -------RPR TEPKPE-KSG CWPRSHADGG ENSBTAP00000036511/1-333 MATEVRAQLA ERSLP----- -------SPK GELKLEKKSG CQPRSHGDSG 51 100 ENSP00000299290/1-351 PQKELVIPGI VDFERIRRAL RTPKPQTPGT YCFGRLSHHS FFSRHHPHPQ bmy_16720T0/1-292 PQKELMIPGI MDFELIREAL RTSTPQTPGA HRFGHLSHHS FFSRHHPHPQ ENSTTRP00000006813/1-351 PQKELRIPGI VDFRLIREEL RTSKPQTPGA HRFGHLSHHS FFSRHHPHPQ ENSBTAP00000036511/1-333 PQKELMIPGI VDFKLIREAV RTSKPQTPSA YRFGRLSHHS FFSRHHPQPQ 101 150 ENSP00000299290/1-351 HVTHIQDLTG KPVCVVRD-- FPAPLPESTV FSGCQMGIPT ISVPIGDPQS bmy_16720T0/1-292 HVTHIQDLTG KPVCVVRDEF SLAASPQATL LPRSLIRMPT ISVPIGDPQS ENSTTRP00000006813/1-351 HVTHIQDLTG KPVCVVRDEF SLAASRQATL LPRSLIGMPT ISVPIGDPQS ENSBTAP00000036511/1-333 HVTHIQDLTG KPVCVVRDE- ---------- -----LSLPT ISVPVGDPQS 151 200 ENSP00000299290/1-351 NRNPQLSSEA WKKELKELAS RVAFLTKEDE LKKKE----- -KEQKEEPLR bmy_16720T0/1-292 NRDPWLSSEA WKKELKDLAS RVAMFTKENQ LKSKESLWPL FSQQKEEPQR ENSTTRP00000006813/1-351 NRDPWLASEA WKKELKDLAS RVAIFTKENA LKSKE----- ----KEEPQR ENSBTAP00000036511/1-333 NRDPRLYSEA WKKELKDLAS RVAIFTKESE LKSKE----- ----KEEPQR 201 250 ENSP00000299290/1-351 EQGAKYSAET GRLIPASTRA VGRRRSHQGQ QSQSSSRHEG VQAFLLQDQE bmy_16720T0/1-292 EQGAKYSAET GRLIPASTRA TARRHSRQGV RNRPASRDGG DQTFILQDQE ENSTTRP00000006813/1-351 ENGAKYSAET GRLIPASSRA TARHHSRQGV RNHSPSTGGG DQTFILQDQE ENSBTAP00000036511/1-333 EQGAKYSAET GRLIPASTWA MARRHSHQG- RNQPASRDGG DQTFVLQDQE 251 300 ENSP00000299290/1-351 LLVLELLCRI LETDLLSAIQ FWLLYAPPKE KDLALGLLQT AVAQLLPQPL bmy_16720T0/1-292 LLILELLSQI LQTDSLNAIQ FWLLYAPPKG EDTVPG---- ---------- ENSTTRP00000006813/1-351 LLILELLSQI LQTDSLNTIR FWLLYAPPKE KDRALGLLQT AVAQLLPQAL ENSBTAP00000036511/1-333 LLILELLSQI LQTDSLNAIQ FWLLYAPAKE KDMALGLLQT AVAQLLPQPL 301 350 ENSP00000299290/1-351 VSIPTEKLLS QLPEVHEPPQ EKQEPPCSQS PKKTKISPFT KSEKPEYIGE bmy_16720T0/1-292 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006813/1-351 VSIPSEKLLN QLQEIQEPLQ ERQQLPYSQS LKKTKMPPLS KSEKPENPGK ENSBTAP00000036511/1-333 VPIPAEKLLN QLLEVQDSLQ ERHQLPYSQS PKKMKTPPLS KSEKPENIGK 351 400 ENSP00000299290/1-351 AQVLQMHSSQ NTEKKTSKPR AES bmy_16720T0/1-292 ---------- -PEPRLSGDR --- ENSTTRP00000006813/1-351 AQLLRVHSSQ NPEEKAAKPK VEC ENSBTAP00000036511/1-333 AQVLRVHSSQ NPEEKAAKAE G--