KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:02 2014 Check: 00 .. Name: ENSTTRP00000002696/1-245 Len: 248 Check: 8136 Weight: 1.00 Name: ENSP00000283006/1-247 Len: 248 Check: 5944 Weight: 1.00 Name: ENSBTAP00000036669/1-244 Len: 248 Check: 1860 Weight: 1.00 Name: bmy_09380T0/1-185 Len: 248 Check: 5102 Weight: 1.00 Name: BACU006221/1-245 Len: 248 Check: 2918 Weight: 1.00 // 1 50 ENSTTRP00000002696/1-245 METQSEEEAA AEAADSRGE- --GEPPQVAG AQAPRPEDRM ALLLRVRAQT ENSP00000283006/1-247 MEEQPQMQDA DEPADSGGEG RAGGPPQVAG AQAACSEDRM TLLLRLRAQT ENSBTAP00000036669/1-244 METQSEEQAV TKPADSGGE- --GGPPQVAG AQAARPEDRM TLLLRLRAQT bmy_09380T0/1-185 ---------- --MVDARNG- ---------- ---------- ---------- BACU006221/1-245 METQSEEQAA AETADSRGE- --GEPPQVAG AQAARPEDRM TLLLRLRAQT 51 100 ENSTTRP00000002696/1-245 KQQLLEYKSM VDANEEKTPE QIMQEKQIEA XXXXXXXXXX XXXXXXXXXX ENSP00000283006/1-247 KQQLLEYKSM VDASEEKTPE QIMQEKQIEA KIEDLENEIE EVKVAFEIKK ENSBTAP00000036669/1-244 KQQLLEYKSM VDANEEKTPE QIMQEKQIEA KIEELENEVE EAKTAFEMKK bmy_09380T0/1-185 RASIMQYYTL ---------- ---------- KIEELEKEIE XAKIAFEMKK BACU006221/1-245 KQQLLEYKSM VDANEEKTPE QIMQEKQIEA KIEELEKEIE EAKIAFEMKK 101 150 ENSTTRP00000002696/1-245 XXXXXMQLSS ALKKHMEKIN TKTXXXXXXX XXXXXXXXXX XXXXXETRDL ENSP00000283006/1-247 LALDRMRLST ALKKNLEKIS RQSSVLMDNM KHLLELNKLI MKSQQESWDL ENSBTAP00000036669/1-244 LALDRMQLST ALKKHLEKVD IKTSVLMDNM KQILNLNKLI MKSQQETWDL bmy_09380T0/1-185 LALDRMQLSS ALKKHLEKIN TKTSVLMDNM KQILSLNKLV MKSQQETRDV BACU006221/1-245 LALDRMQLSS ALKKHLEKIN TKTSVLMDNM KQILSLNKLV MKSQQETRDV 151 200 ENSTTRP00000002696/1-245 EDKLLDVRKK RLQLKQASER KLFEIQTEKN KQKDDLGSME NSGKIKTIQQ ENSP00000283006/1-247 EEKLLDIRKK RLQLKQASES KLLEIQTEKN KQKIDLDSME NSERIKIIRQ ENSBTAP00000036669/1-244 EEKLLDVRKK RLQLKQASER KLLEIQTEKN KQKDDLDSME NSDKIKAIQQ bmy_09380T0/1-185 EEKLLDVRKK RLQLKQASER KLLEIQSEKN KQKDDLASME NSSKIKTIQQ BACU006221/1-245 EEKLLDVRKK RLQLKQASER KLLEIQSEKN KQKDDLASME NSGKIKTIQQ 201 250 ENSTTRP00000002696/1-245 NLEMEIQITT VIQHVFQNLI LGSKANWAED SALKETVLQL EKNLTMIQ ENSP00000283006/1-247 NLQMEIKITT VIQHVFQNLI LGSKVNWAED PALKEIVLQL EKNVDMM- ENSBTAP00000036669/1-244 NLETEIQITT VIQHVFQNLI LGSKVNWAED PALKETVLQL EKNLTMI- bmy_09380T0/1-185 NLEMEIQITT VIQHVFQNLI LGSKTNWAED PALKETVLQL EKNLTTIQ BACU006221/1-245 NLEMEIQITT VIQHVFQNLI LGSKTNWAED PALKETVLQL EKNLTTIQ