KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:02 2014 Check: 00 .. Name: ENSP00000296792/1-518 Len: 519 Check: 4705 Weight: 1.00 Name: ENSBTAP00000036690/1-519 Len: 519 Check: 8421 Weight: 1.00 Name: BACU006195/1-404 Len: 519 Check: 8147 Weight: 1.00 Name: bmy_13291T0/1-479 Len: 519 Check: 7748 Weight: 1.00 Name: ENSTTRP00000006902/1-519 Len: 519 Check: 4558 Weight: 1.00 // 1 50 ENSP00000296792/1-518 MAGYKPVAIQ TYPILGEKIT QDTLYWNNYK TPVQIKEFGA VSKVDFSPQP ENSBTAP00000036690/1-519 MAGYKPVSIQ TYPVLGEKIT QDTLYWNNYK TPVQIKEFGA VSKVDFSPQP BACU006195/1-404 MAGYKPVAIQ TYPVLGEKIT QDTLYWNNYK ---------- ---------- bmy_13291T0/1-479 MAGYKPVAIQ AYPVLGEKIT QDTLYWNNYK TPVQIKEFGA VSKVDFSPQP ENSTTRP00000006902/1-519 MAGYKPVAIQ AYPVLGEKIT QDTLYWNNYK TPVQIKEFGA VSKVDFSPQP 51 100 ENSP00000296792/1-518 PYNYAVTASS RIHIYGRYSQ EPIKTFSRFK DTAYCATFRQ DGRLLVAGSE ENSBTAP00000036690/1-519 PYNYAVTASS RIHIYGRYSQ EPIKTFSRFK DTAYCATFRQ DGRLLVAGSE BACU006195/1-404 ---------- -IHIYGRYSQ EPIKTFSRFK DTAYCATFRQ DGRLLVAGSE bmy_13291T0/1-479 PYNYAVTASS RIHIYGRYSQ EPIKTFSRFK DTA------- ---------- ENSTTRP00000006902/1-519 PYNYAVTASS RIHIYGRYSQ EPIKTFSRFK DTAYCATFRQ DGRLLVAGSE 101 150 ENSP00000296792/1-518 DGGVQLFDIS GRAPLRQFEG HTKAVHTVDF TADKYHVVSG ADDYTVKLWD ENSBTAP00000036690/1-519 DGGVQLFDIS GRAPLRQFEG HTKAVHSVDF TADKYHVVSG ADDYTVKLWD BACU006195/1-404 DGGIQLFDIG GRAPLRQFEG HTKAVHTVDF TADKYHVVSG ADDYTVKLWD bmy_13291T0/1-479 ---------- ---------- ---AVHTVDF TADKYHVVSG ADDYTVKLWD ENSTTRP00000006902/1-519 DGGIQLFDIS GRAPLRQFEG HTKAVHTVDF TADKYHVVSG ADDYTVKLWD 151 200 ENSP00000296792/1-518 IPNSKEILTF KEHSDYVRCG CASKLNPDLF ITGSYDHTVK MFDARTSESV ENSBTAP00000036690/1-519 IPNSKEILTF KEHSDYVRCG CASKLNTDLF VTGSYDHTVK MFDARTNQSV BACU006195/1-404 IPNSKEILTF KEHFDYVRCG CASKLNPDLF VTGSYDHTVK MFDARTNQSV bmy_13291T0/1-479 IPNSKEILTF KEHSDYVRCG CASKLNPDLF VTGSYDHTVK MFDARTNQSV ENSTTRP00000006902/1-519 IPNSKEILTF KEHSDYVRCG CASKLNPDLF VTGSYDHTVK MFDARTNQSV 201 250 ENSP00000296792/1-518 LSVEHGQPVE SVLLFPSGGL LVSAGGRYVK VWDMLKGGQL LVSLKNHHKT ENSBTAP00000036690/1-519 ISVEHGQPVE SVLLFPSGGL LVSAGGRYVK VWDMLKGGQL LVSLKNHHKT BACU006195/1-404 ISVEHGQPVE SVLLFPSGGL LVSAGGRYVK VWDMLKGGQL LVSLKNHHKT bmy_13291T0/1-479 ISVEHGQPVE SVLLFPSGGL LVSAGGRYVK VWDMLKGGQL LVSLKNHHKT ENSTTRP00000006902/1-519 ISVDHGQPVE SVLLFPSGGL LVSAGGRYVK VWDMLKGGQL LVSLKNHHKT 251 300 ENSP00000296792/1-518 VTCLCLSSSG QRLLSGSLDR KVKVYSTTSY KVVHSFDYAA SILSLALAHE ENSBTAP00000036690/1-519 VTCLCLSSSG QRLLSGSLDR KVKVYSTTSY KVVHSFDYTA SILSLALAHE BACU006195/1-404 VTCLCLSSSG QRLLSGSLDR KVKVYSTTSY KVVHSFDYAA SILSLALA-- bmy_13291T0/1-479 VTCLCLSSSG QRLLSGSLDR KVKVYSTTSY KVVHSFDYAA SILSLALAHE ENSTTRP00000006902/1-519 VTCLCLSSSG QRLLSGSLDR KVKVYSTSSY KVVHSFDYAA SILSLALAHE 301 350 ENSP00000296792/1-518 DETIVVGMTN GILSVKHRKS EAKKESLPRR RRPAYRTFIK GKNYMKQRDD ENSBTAP00000036690/1-519 DETIVVGMTN GILSVKHRKS EAKKDSVPRR RRPAYRTFIK GKNYMKQQDD BACU006195/1-404 ---------- ---------- ---------- ---------- ---------- bmy_13291T0/1-479 DETIVVGMTN GILSVKHRKS EAKKDSLPRR RRPAYRTFIK GKNYMKQQDD ENSTTRP00000006902/1-519 DEAIVVGMTN GILSVKHRKS EAKKDSLPRR RRPAYRTFIK GKNYMKQQDD 351 400 ENSP00000296792/1-518 ILINRPAKKH LELYDRDLKH FRISKALDRV LDPTCTIKTP EITVSIIKEL ENSBTAP00000036690/1-519 ILINRPSKKH LELYDRDLKN FRISKALDRV LEPTCTIKTP EVTVSIIKEL BACU006195/1-404 ---------- ---------- ---------- --PSCAIKTP EITVSIIKEL bmy_13291T0/1-479 ILINRPSKKH LELYDRDLKN FRISKALDRV LEPSCAIKTP EITVSIIKEL ENSTTRP00000006902/1-519 ILINRPSKKH LELYDRDLKN FRISKALDRV LEPSCAIKTP EITVSIIKEL 401 450 ENSP00000296792/1-518 NRRGVLANAL AGRDEKEISH VLNFLIRNLS QPRFAPVLIN AAEIIIDIYL ENSBTAP00000036690/1-519 NRRGVLANAL AGRDEKEISR VLNFLIRNLS QPRFAPVLIN AAEIIIDIYL BACU006195/1-404 NRRGVLANAL AGRDEKEISR VLNFLIRNLS QPRFAPVLIN AAEIIIDIYL bmy_13291T0/1-479 NRRGVLANAL AGRDEKEISR VLNFLIRNLS QPRFAPVLIN AAEIIIDIYL ENSTTRP00000006902/1-519 NRRGVLANAL AGRDEKEISR VLNFLIRNLS QPRFAPVLIN AAEIIIDIYL 451 500 ENSP00000296792/1-518 PVIGQSPVVD KKFLLLQGLV EKEIDYQREL LETLGMMDML FATMRRKEGT ENSBTAP00000036690/1-519 PVIGQSPVVD KKFLILQGLV EKEIDYQREL LETLGMMDML FATMTRKEST BACU006195/1-404 PVIGQSPVVD KKFLLLQGLV EKEIDYQREL LETLGMMDML FATMTRKGST bmy_13291T0/1-479 PVIGQSPVVD KKFLLLQGLV EKEIDYQREL LETLGMMDML FATMTRKEST ENSTTRP00000006902/1-519 PVIGQSPVVD KKFLLLQGLV EKEIDYQREL LETLGMMDML FATMTRKEST 501 550 ENSP00000296792/1-518 SVLEH-TSDG FPENKKIES ENSBTAP00000036690/1-519 SVLQHNTSDG FLENNKIES BACU006195/1-404 SLLQQNTSDG FLENKKIES bmy_13291T0/1-479 SLLQHNTSDG FLENKKIES ENSTTRP00000006902/1-519 SLLQHNTSDG FLENKKIES