KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:03 2014 Check: 00 .. Name: bmy_19231T0/1-132 Len: 280 Check: 430 Weight: 1.00 Name: BACU010449/1-211 Len: 280 Check: 314 Weight: 1.00 Name: ENSP00000332513/1-239 Len: 280 Check: 3538 Weight: 1.00 Name: ENSBTAP00000036700/1-208 Len: 280 Check: 8624 Weight: 1.00 Name: ENSTTRP00000014571/1-200 Len: 280 Check: 2445 Weight: 1.00 // 1 50 bmy_19231T0/1-132 ---------- ---------- ---------- ---------- ---------- BACU010449/1-211 ---------- ---------- ---------- ---------- ---------- ENSP00000332513/1-239 MPLLLLGETE PLKLERDCRS PVDPWAAASP DLALACLCHC QDLSSGAFPD ENSBTAP00000036700/1-208 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014571/1-200 ---------- ---------- ---------- --------HC QDLSD-AFPR 51 100 bmy_19231T0/1-132 ---------- ---MVIKVFV ATSSGSIAIR KKQQEVVGFL EANKIDFKEF BACU010449/1-211 ---------- --MFSYKLSN SNLSTLDQIR KKQQEVVGFL EANKIDFKEF ENSP00000332513/1-239 RGVLGGVLFP TVEMVIKVFV ATSSGSIAIR KKQQEVVGFL EANKIDFKEL ENSBTAP00000036700/1-208 ---------- ---MVIKVFV ATSSGSIAIR KKQQEVVGFL EANKIDFKEF ENSTTRP00000014571/1-200 RGVLGGVLFA TLKMVIKVFV -TSSGSIAIR KKQQEVVGFL EANKIDFKEF 101 150 bmy_19231T0/1-132 DIAGDEDNRR WMRENVPGEK KPQNGIPLPP QIFNEEQYCG ---------- BACU010449/1-211 DIAGDEDNRR WMRENVPGEK KPQNGIPLPP QIFNEEQYCG DFDSFFSAKE ENSP00000332513/1-239 DIAGDEDNRR WMRENVPGEK KPQNGIPLPP QIFNEEQYCG DFDSFFSAKE ENSBTAP00000036700/1-208 DIAGDEDNRK WMRENVPGEK KPQNGIPLPP QIFNEEQYCG DFDSFFSAKE ENSTTRP00000014571/1-200 DIAGDEDNRK WMRENVPGEK KPQNGIPLPP QIFNEEQYCG DFDSFFSAKE 151 200 bmy_19231T0/1-132 --VRFDFL-- ---------- ---------- ---------- ---------- BACU010449/1-211 ENIIYSFLGL PPPPGSKVTK SPEEASSLPN GDVTGEAQST TEGTEKAEES ENSP00000332513/1-239 ENIIYSFLGL APPPDSK--- ---------- ---------- --GSEKAEEG ENSBTAP00000036700/1-208 ENIIYSFLGL APPPGSKVTK SPEEASSLPD GEVAGEAQST TEGTEKAEES ENSTTRP00000014571/1-200 ENIIYSFLGL APPPGSK--- ---------- ---------- --GTEKAEES 201 250 bmy_19231T0/1-132 ---------- ---------- EKS------- SACVFIRSHL KQINFEAAFE BACU010449/1-211 GQQEAQKEGS EDAGELTGSP EKNLWLLRAK PVTVILPLDA ECLFSKSWSG ENSP00000332513/1-239 GETEAQKEGS EDVGNLPEAQ EKN------E EEGETATEET EEIAMEGAEG ENSBTAP00000036700/1-208 GEQEAQKEGD EDAGDLAGSQ EKD------E EEEETAAEET KEVTTEGAEG ENSTTRP00000014571/1-200 GQHEAQKEGS EDAGDLTGSP EKN------E EEGETATEEM EEITAEGAEG 251 300 bmy_19231T0/1-132 FFDIFQVMI- YFYHSVPGCS AFR---EMVF BACU010449/1-211 PMTCSPADVA SVLSEGPFPV LFS------- ENSP00000332513/1-239 EAEEEEETA- E--GEEPGED EDS------- ENSBTAP00000036700/1-208 EAEGEEAEE- E--EEEPGEE EEEGDEEEES ENSTTRP00000014571/1-200 EAEEEEAEKG E--EEGPGEE EDS-------