KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:04 2014 Check: 00 .. Name: ENSTTRP00000011702/1-110 Len: 286 Check: 1917 Weight: 1.00 Name: ENSBTAP00000036831/1-284 Len: 286 Check: 3089 Weight: 1.00 Name: bmy_22197T0/1-176 Len: 286 Check: 1921 Weight: 1.00 Name: BACU009065/1-255 Len: 286 Check: 3080 Weight: 1.00 // 1 50 ENSTTRP00000011702/1-110 ---------- ---------- ----TLPRPS IWGQ-GSVIS R-RQLIFVCR ENSBTAP00000036831/1-284 MAPGPSTLLS LALCLAQTAR TQQGTLPRPS ISAEPGSVVP WGRPVSIVCR bmy_22197T0/1-176 -LP------- -VLCLGHTIH TQAGTLPRRS TTAEPDSVSP QGWPVTIVCR BACU009065/1-255 MLPRPTTLLG LVLCLGHTIH MQAGTLPRRS TRAEPDSVSP QGWPVTIVCR 51 100 ENSTTRP00000011702/1-110 GPDRVKRFHL ER-EDGAKEK NEDNVSQLGP HQTEARFGIT VMSKDTVWHY ENSBTAP00000036831/1-284 GPAGVMSFRL EK-GNRKDYK DV-RVTSRGE QETEARFHIT ALREDAVGRY bmy_22197T0/1-176 GPAGVEGFRL ERKENRSDFK DEDTVSQIGP QQTEARFSIT AVRGDTAQHY BACU009065/1-255 GPAGAEEFRL ERKENRSDFK DEHNVSQIGP HQTEARFSIT AVRGDTAQHY 101 150 ENSTTRP00000011702/1-110 CCRYKRVG-W SEPSEPLELV V--------- ---------- ---------- ENSBTAP00000036831/1-284 HCLYQKESTW SALSEALRFL SKGTAIGREE PAQGSPTGPQ TRGSECEHHK bmy_22197T0/1-176 QCLYRTGGLW SEPRDALELV V--------- ---------- ---------- BACU009065/1-255 QCLYRTGSHW SEPRDALELA V--------- ---------- ---------- 151 200 ENSTTRP00000011702/1-110 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000036831/1-284 HPASPTGLST EQVYILIGVS VAFLLCLSLL VLLLLHRQLR RKRGPPRSKD bmy_22197T0/1-176 ---------- ---------- ---------- ---------- --TGPPRSQS BACU009065/1-255 --TAPTGLST EHVYILIGVP VAFLLCLLLL GLFLLHRQHE RKWGPPRSQG 201 250 ENSTTRP00000011702/1-110 ---------- ---------- ---------- ---------- --TGRGDFSS ENSBTAP00000036831/1-284 EKQRRQGRLS PAVDVLDGTP GVASVDRFPD VDGEVGAFTP AAGGSQEVTY bmy_22197T0/1-176 EEQRPQERLS PAVDVPDGTP ---------- ---------- --GGPQEVIY BACU009065/1-255 EEQRPQERLS PAVDVPDGTP DLAAVYRFPE KNGEVDTSAP AAGGPQEVIY 251 300 ENSTTRP00000011702/1-110 AH-------- ---------- TQPYYSA--- ------ ENSBTAP00000036831/1-284 AQLNHKLLTQ RVARAVSPPS TEPLAKSSTY ATIARR bmy_22197T0/1-176 AQLDHPALAQ RAARAVSLLS TEPTAKSS-- ------ BACU009065/1-255 AQLDHPALAQ RAARAVSLLS TEPTAKSSMY AVLARN