KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:06 2014 Check: 00 .. Name: bmy_21366T0/1-573 Len: 599 Check: 8896 Weight: 1.00 Name: ENSBTAP00000036889/1-314 Len: 599 Check: 1023 Weight: 1.00 Name: ENSTTRP00000005903/1-306 Len: 599 Check: 2016 Weight: 1.00 Name: ENSP00000308714/1-314 Len: 599 Check: 8811 Weight: 1.00 // 1 50 bmy_21366T0/1-573 MQRDGKGHAN EKDMPFPNLL LVLAFSGTSG FMAEKNLTLV TKFLLMAFID ENSBTAP00000036889/1-314 ---------- ---------- ---------- -MPGRNATVV TEFLLTVFAD ENSTTRP00000005903/1-306 ---------- ---------- ---------- -KAGRNYTVV TEFFLTVFAE ENSP00000308714/1-314 ---------- ---------- ---------- -MAERNYTVV TEFFLTAFTE 51 100 bmy_21366T0/1-573 CPEWTLPLFL LFLFIYLITL LGNLGMIILI RVDLRLHTPM YFLLSHLSFM ENSBTAP00000036889/1-314 HPHWGLPLFA VFLGFYLLTL LGNCGMILLI RQDRRLHTPM YFFLGHLALV ENSTTRP00000005903/1-306 HPEHCSPLF- VFLGFYILTL LGNSGTIFLT RKDCRLHTP- -FFLSHLSFV ENSP00000308714/1-314 HLQWRVPLFL IFLSFYLATM LGNTGMILLI RGDRRLHTPM YFFLSHLSLV 101 150 bmy_21366T0/1-573 DICYSFXTVP LMMAVLLEHR AALSYTLCAA QFFLFTFFGS IDCYLLALMA ENSBTAP00000036889/1-314 DICYSSTVVP QVLGVLLERG VVLSRARCAT QFFLFTFFAS MDCYLLAIMA ENSTTRP00000005903/1-306 DIS-SSAIIP QMLTVLLERG RVISKARCAA QLFFFTFFSS IDCYLLAVMA ENSP00000308714/1-314 DICYSSAIIP QMLAVLWEHG TTISQARCAA QFFLFTFFAS IDCYLLAIMA 151 200 bmy_21366T0/1-573 NDLYVAVCRP LLYVTIMRRK ARLGFVCVCV CVGGSYVAGV FSTLV----- ENSBTAP00000036889/1-314 YDRCVAVCRP LLYVAIVTEK ARWVLVV--- ---GAYAAGF SSALIRTVTA ENSTTRP00000005903/1-306 CDRYVAVCQP LLYVTTMTEK ARLGLVA--- ---GAYVACF SSAFI-TVTA ENSP00000308714/1-314 YDRYTAVCQP LLYVTIITEK ARWGLVT--- ---GAYVAGF FSAFVRTVTA 201 250 bmy_21366T0/1-573 ---------- ---------- -WKITCGDSY TQEVVIIVFA IFVIPACMVV ENSBTAP00000036889/1-314 FTLSFCGNNQ IDFIFCDLPP LLKLSCGDSY TQEVVIIVFA VLVMPTCILI ENSTTRP00000005903/1-306 FTLFFCGNNE INFIFCDQPP LLKLACGESY TQEVGIIV-A VFVMPACILV ENSP00000308714/1-314 FTLSFCGNNE INFIFCDLPP LLKLSCGDSY TQEVVIIVFA LFVMPACILV 251 300 bmy_21366T0/1-573 ILVSYLLIIL AIMRIPSTGG RAKTFWTCAS HLTAVSLFFG TLIFMYLKDN ENSBTAP00000036889/1-314 ILVSYAFIVL AIVQMRSSGG RAKTFSTCAS HLAAVALFFG TLIFMYLRDN ENSTTRP00000005903/1-306 ILVSYLFVIM AFMQVCSAWG QAKTFSTCAS HLTAVALFFG TLIFMYL-DN ENSP00000308714/1-314 ILVSYLFIIV AILQIHSAGG RAKTFSTCAS HLTAVALFFG TLIFMYLRDN 301 350 bmy_21366T0/1-573 SGQSSEEDRV VSVFYITVIP MLNPLIYSLR NKEVKEALRK ILNRASFHRS ENSBTAP00000036889/1-314 SGQSSEADRV VSVLYTVVSP MLNPLIYSLR NKEVKGAVLK SLSR------ ENSTTRP00000005903/1-306 SGQSSEADQV VSVLYTVVTP ILNPVIYSLR NKEVRESVVK ALS------- ENSP00000308714/1-314 TGQSSEGDRV VSVLYTVVTP MLNPLIYSLR NKEVKEATRK ALSK------ 351 400 bmy_21366T0/1-573 TFEWMAGRSH TVVTEFFLTV FAEHPEGEGS PLFLVFLGFY ILTLLGNSEM ENSBTAP00000036889/1-314 ---------- ---------- ----PKVSGR S--------- ---------- ENSTTRP00000005903/1-306 ---------- ---------- ----SKASGR P--------- ---------- ENSP00000308714/1-314 ---------- ---------- ----SKPARR P--------- ---------- 401 450 bmy_21366T0/1-573 IFLTRKDRRL HTPMYFFLSH LSFGDTSAIV PQILAALLEH GRGISKARCA ENSBTAP00000036889/1-314 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005903/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000308714/1-314 ---------- ---------- ---------- ---------- ---------- 451 500 bmy_21366T0/1-573 AHFFLFTFFA PIDCCLLAIM AYDRYVAVCR PLLYVTIMTE KARLGLVAGA ENSBTAP00000036889/1-314 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005903/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000308714/1-314 ---------- ---------- ---------- ---------- ---------- 501 550 bmy_21366T0/1-573 YVAGFSSAFI RTVTAFTLFF CGNNEINFIF CDLPLLLKLA GGEGYTEEVV ENSBTAP00000036889/1-314 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005903/1-306 ---------- ---------- ---------- ---------- ---------- ENSP00000308714/1-314 ---------- ---------- ---------- ---------- ---------- 551 600 bmy_21366T0/1-573 IIVFAVFVMP ACISLILVSY LFVIMAIMQV CSAWGQAKTF STCASHLTA ENSBTAP00000036889/1-314 ---------- ---------- ---------- ---------- --------- ENSTTRP00000005903/1-306 ---------- ---------- ---------- ---------- --------- ENSP00000308714/1-314 ---------- ---------- ---------- ---------- ---------