KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:11 2014 Check: 00 .. Name: ENSP00000265857/1-327 Len: 327 Check: 1176 Weight: 1.00 Name: ENSBTAP00000036940/1-273 Len: 327 Check: 9278 Weight: 1.00 Name: bmy_08937T0/1-323 Len: 327 Check: 1806 Weight: 1.00 Name: ENSTTRP00000010881/1-274 Len: 327 Check: 4483 Weight: 1.00 // 1 50 ENSP00000265857/1-327 MAAAAAMAEQ ESARNGGRNR GGVQRVEGKL RASVEKGDYY EAHQMYRTLF ENSBTAP00000036940/1-273 -MAAAAMAEQ ESARNGARNR GGVQRVEGKL RASVEKGDYY EAHQMYRTLF bmy_08937T0/1-323 ---MAAAMAE ESARNGARNR GGVQRVEGKL RASVEKGDYY EAHQMYRTLF ENSTTRP00000010881/1-274 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000265857/1-327 FRYMSQSKHT EARELMYSGA LLFFSHGQQN SAADLSMLVL ESLEKAEVEV ENSBTAP00000036940/1-273 FRYMAQSKHA EARELMCSGA LLFFSHGQQN SAADLSMLVL ESLEKAEVEV bmy_08937T0/1-323 FRYMAQSKHA EARELMCSGA LLFFSHGQQN SAADLSMLVL ESLEKAEVEV ENSTTRP00000010881/1-274 --YMAQSKHA EARELMCSGA LLFFSHGQQN SAADLSMLVL ESLEKAEVEV 101 150 ENSP00000265857/1-327 ADELLENLAK VFSLMDPNSP ERVTFVSRAL KWSSGGSGKL GHPRLHQLLA ENSBTAP00000036940/1-273 ADELLESLAK LFSLMDPNSP ERVAFVSRAL KWSSGGSGKL GHPRLHQLLA bmy_08937T0/1-323 VDELLESLAK LFSLMDPNSP ERVAFVSRAL KWSSGGSGKL GHPRLHQLLA ENSTTRP00000010881/1-274 VEELLESLAK LFSLMDPNSP ERVAFVSRAL KWSSGGSGKL GHPRLHQLLA 151 200 ENSP00000265857/1-327 LTLWKEQNYC ESRYHFLHSA DGEGCANMLV EYSTSRGFRS EVDMFVAQAV ENSBTAP00000036940/1-273 LTLWKEQNYC ESRYHFLHSS DGEGCANMLV EYSTARGFRS EVDMFVAQAV bmy_08937T0/1-323 LTLWKEQNYC ESRYHFLHSS DGEGCANMLV EYSTARGFRS EVDMFVAQAV ENSTTRP00000010881/1-274 RTLWKEQNYC ESRYHFLHSS DGEGCANMLV EYSTARGFRS EVDMFVAQAV 201 250 ENSP00000265857/1-327 LQFLCLKNKS SASVVFTTYT QKHPSIEDGP PFVEPLLNFI WFLLLAVDGG ENSBTAP00000036940/1-273 LQFLCLKNKS SASVVFTTYT QKHPSIEGGP PFVQPLLNFI WFLLLAVDGG bmy_08937T0/1-323 LQFLCLKNKS SASVVFTTYT RKHPSIESGP PFAQPLLNFI WFLLLAVDGG ENSTTRP00000010881/1-274 LQFLCLKNKS SASVVFTTYT RKHPSIESGP PFVQPLLNFL WFLLLAVDGG 251 300 ENSP00000265857/1-327 KLTVFTVLCE QYQPSLRRDP MYNEYLDRIG QLFFGVPPKQ TSSYGGLLGN ENSBTAP00000036940/1-273 KLTVFTVLCE QYQPSLRRDP MYNE------ ---------- ---------- bmy_08937T0/1-323 KLTVFTVLCE QYQPSLRRDP MYNEYLDRIG QLFFGVPPKQ TSSYGGLLGN ENSTTRP00000010881/1-274 KLTVFTVLCE QYQPSLRRDP MYNEYLDRIG QLFFGVPPKQ TSSYGGLLGN 301 350 ENSP00000265857/1-327 LLTSLMGSSE QEDGEESPSD GSPIELD ENSBTAP00000036940/1-273 ---------- ---------- ------- bmy_08937T0/1-323 LLSSLMGSSE QE-GEDSQDD SSPIELD ENSTTRP00000010881/1-274 LLSSLMGSSE QE-GEDSQDD SSPIELD