KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:13 2014 Check: 00 .. Name: ENSTTRP00000001841/1-1165 Len: 1167 Check: 2746 Weight: 1.00 Name: ENSP00000380150/1-1154 Len: 1167 Check: 1112 Weight: 1.00 Name: ENSBTAP00000036945/1-1146 Len: 1167 Check: 9487 Weight: 1.00 Name: bmy_10276T0/1-1138 Len: 1167 Check: 1537 Weight: 1.00 Name: BACU005507/1-1147 Len: 1167 Check: 5077 Weight: 1.00 // 1 50 ENSTTRP00000001841/1-1165 GVKAPPVHGR HSMPGGAPEM DDYMQTLKDE EDALWENVEC NRHMLSRYIN ENSP00000380150/1-1154 ---------- --MPGGGPEM DDYMETLKDE EDALWENVEC NRHMLSRYIN ENSBTAP00000036945/1-1146 ---------- ---------M DDYMETLKDE EDALWENVEC NRHMLSRYIN bmy_10276T0/1-1138 ---------- ---------M DDYVETLKDE EDALWENVEC NRHMLSRYIN BACU005507/1-1147 ---------- ---------M DDYMETLKDE EDALWENVEC NRHMLSRYIN 51 100 ENSTTRP00000001841/1-1165 PAKLTPYLRQ CKVIDEQDED EVLNAPMLPS KINRAGRLLD ILHTKGQRGY ENSP00000380150/1-1154 PAKLTPYLRQ CKVIDEQDED EVLNAPMLPS KINRAGRLLD ILHTKGQRGY ENSBTAP00000036945/1-1146 PAKLTPYLRQ CKVIDEQDED EVLNAPMLPS KINRAGRLLD ILHTKGQRGY bmy_10276T0/1-1138 PAKLTPYLRQ CKVIDEQDED EVLNAPMLPS KINRAGRLLD ILHTKGQRGY BACU005507/1-1147 PAKLTPYLRQ CKVIDEQDED EVLNAPMLPS KINRAGRLLD ILHTKGQRGY 101 150 ENSTTRP00000001841/1-1165 VAFLESLEFY YPELYKLVTG KEPTRRFSTI VVEEGHEGLT HFLMNEVIKL ENSP00000380150/1-1154 VVFLESLEFY YPELYKLVTG KEPTRRFSTI VVEEGHEGLT HFLMNEVIKL ENSBTAP00000036945/1-1146 VVFLESLEFY YPELYKLVTG KEPTRRFSTI VVEEGHEGLT HFLMNEVIKL bmy_10276T0/1-1138 VVFLESLEFY YPELYKLVTG KEPTRRFSTI VVEEGHEGLT HFLMNEVIKL BACU005507/1-1147 VVFLESLEFY YPELYKLVTG KEPTRRFSTI VVEEGHEGLT HFLMNEVIKL 151 200 ENSTTRP00000001841/1-1165 QQQMKAKDLQ RCELLAKSRQ LEDDRKQLTL TQVELLTFRD RYYKMKEERD ENSP00000380150/1-1154 QQQMKAKDLQ RCELLARLRQ LEDEKKQMTL TRVELLTFQE RYYKMKEERD ENSBTAP00000036945/1-1146 QQQMKAKDLQ RCELLAKSRQ LEDEKKQLTL TRVELLTFQE RYYKMKEERD bmy_10276T0/1-1138 QQQMKAKDLQ RCELLAKSRQ LEDEKKQLTL TQVELLTFQD RYYKMKEERD BACU005507/1-1147 QQQMKAKDLQ RCELLAKSRQ LEDEKKQLTL TQVELLTFQD RYYKMKEERD 201 250 ENSTTRP00000001841/1-1165 SYNDELVKVK DDNYNLAMRY AQLSEEKNMA VMRSRDLQLE IDQLKHRLNK ENSP00000380150/1-1154 SYNDELVKVK DDNYNLAMRY AQLSEEKNMA VMRSRDLQLE IDQLKHRLNK ENSBTAP00000036945/1-1146 SYNDELVKVK DDNYNLAMRY AQLSEEKNMA VMRSRDLQLE IDQLKHRLNK bmy_10276T0/1-1138 SYNDELVKVK DDNYSLAMRY AQLSEEKNMA VMRSRDLQLE IDQLKHRLNK BACU005507/1-1147 SYNDELVKVK DDNYSLAMRY AQLSEEKNMA VMRSRDLQLE IDQLKHRLNK 251 300 ENSTTRP00000001841/1-1165 MEEECKLERN QSLKLKNDIE NRPKKEQVLE LERENEMLKT KIQELQSIIQ ENSP00000380150/1-1154 MEEECKLERN QSLKLKNDIE NRPKKEQVLE LERENEMLKT KNQELQSIIQ ENSBTAP00000036945/1-1146 MEEECKLERN QSLKLKNDIE NRPKKEQVLE LERENEMLKT KIQELQSIIQ bmy_10276T0/1-1138 MEEECKLERN QSLKLKNDIE NRPKREQVLE LERENEMLKT KIQELQSIIQ BACU005507/1-1147 MEEECKLERN QSLKLKNDIE NRPKREQVLE LERENEMLKT KIQELQSIIQ 301 350 ENSTTRP00000001841/1-1165 AGKRSLPDSD KAILDILEHD RKEALEDRQE LVNKIYNLQE EVRQAEELRD ENSP00000380150/1-1154 AGKRSLPDSD KAILDILEHD RKEALEDRQE LVNRIYNLQE EARQAEELRD ENSBTAP00000036945/1-1146 AGKRSLPDSD KAILDILEHD RKEALEDRQE LVNKIYNLQE EVRQAEELRD bmy_10276T0/1-1138 AGKRSLPDSD KAILDILEHD RKEALEDRQE LVNKIYNLQE EVRQAEELRD BACU005507/1-1147 AGKRSLPDSD KAILDILEHD RKEALEDRQE LVNKIYNLQE EVRQAEELRD 351 400 ENSTTRP00000001841/1-1165 KYLEEKEDLQ LKCSTLGKDC EMYKHRMNTL MLQLEEVERE RDQAFHSRDE ENSP00000380150/1-1154 KYLEEKEDLE LKCSTLGKDC EMYKHRMNTV MLQLEEVERE RDQAFHSRDE ENSBTAP00000036945/1-1146 KYLEEKEDLE LKCSTLGKDC EMYKHRMNTV MLQLEEVERE RDQAFHSRDE bmy_10276T0/1-1138 KYLEEREDLE LKCSTLGKDC EMYKHRMNTV MLQLEEVERE RDQAFHSRDE BACU005507/1-1147 KYLEEREDLE LKCSTLGKDC EMYKHRMNTV MLQLEEVERE RDQAFHSRDE 401 450 ENSTTRP00000001841/1-1165 AQTQYSQCLI EKDKYRKQIR ELEEKNDEMR IEMVRREACI VNLESKLRRL ENSP00000380150/1-1154 AQTQYSQCLI EKDKYRKQIR ELEEKNDEMR IEMVRREACI VNLESKLRRL ENSBTAP00000036945/1-1146 AQTQYSQCLI EKDKYRKQIR ELEEKNDEMR IEMVRREACI VNLESKLRRL bmy_10276T0/1-1138 AQTQYSQCLI EKDKYRKQIR ELEEKNDEMR IEMVRREACI VNLESKLRRL BACU005507/1-1147 AQTQYSQCLI EKDKYRKQIR ELEERNDEMR IEMVRREACI VNLESKLRRL 451 500 ENSTTRP00000001841/1-1165 SRDSGGLEQS LPRNLPVTII SQNFGDTSPR TNGQEADDSS TSEDSPEDSR ENSP00000380150/1-1154 SKDSNNLDQS LPRNLPVTII SQDFGDASPR TNGQEADDSS TSEESPEDSK ENSBTAP00000036945/1-1146 SKDSGTLEQS LPRNLPVTII SQNFGDTSPR TNGQEADDSS TSEDSPEDNR bmy_10276T0/1-1138 SKDSGSLEQS LPRNLPVTII SQNFGDTSPR TNGQEADDSS TSEDSPEDSR BACU005507/1-1147 SKDSGSLEQS LPRNLPVTII SQNFGDTSPR TNGQEADDSS TSEDSPEDSR 501 550 ENSTTRP00000001841/1-1165 YFLPYHPPKR RMNLKGIQLQ RAKSPISLKR TSDFQGRGHE EDVTDASPSS ENSP00000380150/1-1154 YFLPYHPPQR RMNLKGIQLQ RAKSPISLKR TSDFQAKGHE EEGTDASPSS ENSBTAP00000036945/1-1146 YFLPHHPPKR RMNLKGIQLQ RAKSPISLKR ASDFQGRGQE EDLMDASPSS bmy_10276T0/1-1138 YFLPYHPPKR RMNLKGIQLQ RAKSPISLKR TSDFQ----E AQRINI---- BACU005507/1-1147 YFLPYHPPKR RMNLKGIQLQ RAKSPISLKR TSDFQGRGHE EDVMDASPSS 551 600 ENSTTRP00000001841/1-1165 SGSLPITTSF SKMQ-PHRSR SSIMSITAEP PGNDSIVRRC KEDAPHRSTV ENSP00000380150/1-1154 CGSLPITNSF TKMQ-PPRSR SSIMSITAEP PGNDSIVRRY KEDAPHRSTV ENSBTAP00000036945/1-1146 SRSLPITNSF SKM--PHRSR SSIMSITAEP PGNDSIVRRY KEDAPHRSTV bmy_10276T0/1-1138 --QLPVTHLC VCLKQPHRSR SSIMSIMAEP PGNDSIVRRY KEDAPHRSTV BACU005507/1-1147 SRSLPVTTSF SKMQ-PHRSR SSIMSIMAEP PGNDSIVRRY KEDAPHRSTV 601 650 ENSTTRP00000001841/1-1165 EDDNDSGGFD ALDLDDDSHE RFPFGPPSTH SSSSSHQSEG LDAYDLEQVN ENSP00000380150/1-1154 EEDNDSGGFD ALDLDDDSHE RYSFGPSSIH SSSSSHQSEG LDAYDLEQVN ENSBTAP00000036945/1-1146 EEDNDSGGFD ALDLDDDSHE RCSFGPPSIH SSSSSHQSEG LDAYDLEQVN bmy_10276T0/1-1138 EEDNDSGGFD ALDLDDDSHE RYSFGPPSIH SSSSSHQSEG LDAYDLEQVN BACU005507/1-1147 EEDNDSGGFD ALDLDDDSHE RYSFGPPSIH SSSSSHQSEG LDAYDLEQVN 651 700 ENSTTRP00000001841/1-1165 LMFRKFSLEX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000380150/1-1154 LMFRKFSLER PFRPSVTSVG HVRGPGPSVQ HTTLNGDSLT SQLTLLGGNA ENSBTAP00000036945/1-1146 LMFRKFSLER PFRPSVTSVG HVRGPGLSVQ HTTLSGDSLI SQLSLLGGNA bmy_10276T0/1-1138 LMFRKFSLER PFRPSVTSVG HVRGPGPSVQ HTTLSGDSLT SQLTLLGGNA BACU005507/1-1147 LMFRKFSLER PFRPSVTSVG HVRGPGPSVQ HTTLSGDSLT SQLTLLGGNA 701 750 ENSTTRP00000001841/1-1165 XXXXXXXXXX XXXXXXXXXX XXHQLLLLEG CVKGEKQSVP LETCTKEEVH ENSP00000380150/1-1154 RGSFVHSVKP GSLAEKAGLR EGHQLLLLEG CIRGERQSVP LDTCTKEEAH ENSBTAP00000036945/1-1146 SGSFVHSVKP GSLAEKAGLR EGHQLLLLEG CIRGERQSVP LDACTKEEAH bmy_10276T0/1-1138 SGSFVHSVKP GSLAEKAGLR EGLQLLLLEG CIKGEKQSVP LETCTKEEAH BACU005507/1-1147 SGSFVHSVKP GSLAEKAGLR EGLQLLLLEG CIKGEKQSVP LETCTKEEAH 751 800 ENSTTRP00000001841/1-1165 WTVQRCSGPV TLHYKVNQEG YRKLLKDMEE GLITSGDSFY IRLNLNISSQ ENSP00000380150/1-1154 WTIQRCSGPV TLHYKVNHEG YRKLVKDMED GLITSGDSFY IRLNLNISSQ ENSBTAP00000036945/1-1146 WTIQRCSGPV TLHYKVNQEG YRKLLKDMEE GLITSGDSFY IRLNLNICSQ bmy_10276T0/1-1138 WTIQRCSGPV TLHYKVNQEG YRKLLKDMEE GLITSGDSFY IRLNLNISSQ BACU005507/1-1147 WTIQRCSGPV TLHYKVNQEG YRKLLKDMEE GLITSGDSFY IRLNLNISSQ 801 850 ENSTTRP00000001841/1-1165 LDACSMSLKC DDVVHVRDTM YQDKHEWLCA RVDPFTDHDL DMGTIPSYSR ENSP00000380150/1-1154 LDACTMSLKC DDVVHVRDTM YQDRHEWLCA RVDPFTDHDL DMGTIPSYSR ENSBTAP00000036945/1-1146 LDACSMSLKC DDVVHVRDTM YQDKHEWLCA RVDPFTDHDL DMGTIPSYSR bmy_10276T0/1-1138 LDACSMSLKC DDVVHVRDTM YQDKHEWLCA RVDPFTDHDL DMGTIPSYSR BACU005507/1-1147 LDACSMSLKC DDVVHVRDTM YQDKHEWLCA RVDPFTDHDL DMGTIPSYSR 851 900 ENSTTRP00000001841/1-1165 AQQLLLVKLQ -LMHRGSREE VDTAHHTLRA LRNTLQPEEP LPAADPRVSP ENSP00000380150/1-1154 AQQLLLVKLQ RLMHRGSREE VDGTHHTLRA LRNTLQPEEA LSTSDPRVSP ENSBTAP00000036945/1-1146 AQQLLLVKLQ RLMHRGSREE ADTAHHTLRA LRNTLQPEEP LPTTDPRVSP bmy_10276T0/1-1138 AQQLLLVKLQ RLMHRGSREE VDTAHHTLRA LRNTLQPEEP LPTADPRVSP BACU005507/1-1147 AQQLLLVKLQ RLMHRGSREE VDTAHHTLRA LRNTLQPEEP LPTADPRVSP 901 950 ENSTTRP00000001841/1-1165 RLSRASFLFG QLLQFVSRSE NKYKRMNSHE RVRIVAGSPR GSLARSSLDA ENSP00000380150/1-1154 RLSRASFLFG QLLQFVSRSE NKYKRMNSNE RVRIISGSPL GSLARSSLDA ENSBTAP00000036945/1-1146 RLSRASFLFG QLLQFVSRSE NKYKRMNSHE RVRIVSGSPR GSLARSSLDA bmy_10276T0/1-1138 RLSRASFLFG QLLQFVSRSE NKYKRMNSHE RVRIVSGSPR GSLARSSLDA BACU005507/1-1147 RLSRASFLFG QLLQFVSRSE NKYKRMNSHE RVRIVSGSPR GSLARSSLDA 951 1000 ENSTTRP00000001841/1-1165 TKLLTEKQEE LDPESELGKN LSLIPYSLVR AFYCERRRPV LFTPTMLAKA ENSP00000380150/1-1154 TKLLTEKQEE LDPESELGKN LSLIPYSLVR AFYCERRRPV LFTPTVLAKT ENSBTAP00000036945/1-1146 TKLLTEKQEE LDPESELGKN LSLIPYSLVR AFYCERRRPV LFTPTMLAKA bmy_10276T0/1-1138 TKLLTEKQEE LDPESELGRN LSLIPYSLVR AFYCERRRPV LFTPTMLAKA BACU005507/1-1147 TKLLTEKQEE LDPESELGRN LSLIPYSLVR AFHCERRRPV LFTPTMLAKA 1001 1050 ENSTTRP00000001841/1-1165 LVQKLLNSGG AMEFTMCKPD VVTRDEFLRK QKTETIIYSR EKNPNSFECV ENSP00000380150/1-1154 LVQRLLNSGG AMEFTICKSD IVTRDEFLRR QKTETIIYSR EKNPNAFECI ENSBTAP00000036945/1-1146 LVQKLLNSGG AMEFTMCKPD VVTRDEFLRK QKTETIIHSR EKNPNTFECV bmy_10276T0/1-1138 LVQKLLNSGG AMEFTMCKPD VVTRDEFLRK QKTETIIYSR EKNPNSFECV BACU005507/1-1147 LVQKLLNSGG AMEFTMCKPD VVTRDEFLRK QKTETIIYSR EKNPNSFECV 1051 1100 ENSTTRP00000001841/1-1165 VPAHIEAVAA KNKHCLLEAG ISCARDLIKS RIYPIVLFIR VSEKNIKKFR ENSP00000380150/1-1154 APANIEAVAA KNKHCLLEAG IGCTRDLIKS NIYPIVLFIR VCEKNIKRFR ENSBTAP00000036945/1-1146 VPAHIEAVAA KNKHCLLEAG ISCTRDLIKS RIYPIVLFVR VSEKNIKKFR bmy_10276T0/1-1138 VPAHIEAVAA KNKHCLLEAG ISCTRDLIKS RIYPIVLFVR VSEKNIKKFR BACU005507/1-1147 VPAHIEAVAA KNKHCLLEAG ISCTRDLIKS RIYPIVLFVR VSEKNIKKFR 1101 1150 ENSTTRP00000001841/1-1165 KMLSRPETEE EFLRLCRLKE KELEALPCLY ASVEADMWGS VEELLRVIKD ENSP00000380150/1-1154 KLLPRPETEE EFLRVCRLKE KELEALPCLY ATVEPDMWGS VEELLRVVKD ENSBTAP00000036945/1-1146 KMLPRPETED EFLRLCRLKE KELEALPCLY ATVEADMWGS VEELLRVIKD bmy_10276T0/1-1138 KMLARPETEE EFLRLCRLKE KELEALPCLY ASVEADMWGS VEDLLRVIKD BACU005507/1-1147 KMLARPETEE EFLRLCRLKE KELEALPCLY ASVEADMWGS VEDLLRVIKD 1151 1200 ENSTTRP00000001841/1-1165 KIGDEQRKTV WVDEDQL ENSP00000380150/1-1154 KIGEEQRKTI WVDEDQL ENSBTAP00000036945/1-1146 KIAEEQRKTV WVDEDQL bmy_10276T0/1-1138 KIGDEQRKTV WVDEDQL BACU005507/1-1147 KIGDEQRKTV WVDEDQL