KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:14 2014 Check: 00 .. Name: bmy_13995T0/1-232 Len: 232 Check: 5382 Weight: 1.00 Name: ENSP00000386023/1-144 Len: 232 Check: 4683 Weight: 1.00 Name: ENSTTRP00000002819/1-144 Len: 232 Check: 4683 Weight: 1.00 Name: ENSBTAP00000036979/1-144 Len: 232 Check: 4683 Weight: 1.00 Name: BACU018692/1-144 Len: 232 Check: 4825 Weight: 1.00 // 1 50 bmy_13995T0/1-232 MPKVKRSRKA PPDGWELIEP TLDELDQKMR EAETEPHEGK RKVESLWPIF ENSP00000386023/1-144 MPKVKRSRKA PPDGWELIEP TLDELDQKMR EAETEPHEGK RKVESLWPIF ENSTTRP00000002819/1-144 MPKVKRSRKA PPDGWELIEP TLDELDQKMR EAETEPHEGK RKVESLWPIF ENSBTAP00000036979/1-144 MPKVKRSRKA PPDGWELIEP TLDELDQKMR EAETEPHEGK RKVESLWPIF BACU018692/1-144 MPKVKRSRKA PPDGWELIEP TLDELDQKMR EDDSEAQEGS RKVESLWPIF 51 100 bmy_13995T0/1-232 RIHHQKTRYI FDLFYKRKAI SRELYEYCIK EGYADKNLIA KWKKQGYENL ENSP00000386023/1-144 RIHHQKTRYI FDLFYKRKAI SRELYEYCIK EGYADKNLIA KWKKQGYENL ENSTTRP00000002819/1-144 RIHHQKTRYI FDLFYKRKAI SRELYEYCIK EGYADKNLIA KWKKQGYENL ENSBTAP00000036979/1-144 RIHHQKTRYI FDLFYKRKAI SRELYEYCIK EGYADKNLIA KWKKQGYENL BACU018692/1-144 RIHHQKTRYI FDLFYKRKAI SRELYEYCIK EGYADKNLIA KWKKQGYENL 101 150 bmy_13995T0/1-232 CCLRCIQTRD TNFGTNCICR VPKSKLEVMS RGHPSRRRSP ACGRVTRGRG ENSP00000386023/1-144 CCLRCIQTRD TNFGTNCICR VPKSKLEV-- ---------- --GRIIECTH ENSTTRP00000002819/1-144 CCLRCIQTRD TNFGTNCICR VPKSKLEV-- ---------- --GRIIECTH ENSBTAP00000036979/1-144 CCLRCIQTRD TNFGTNCICR VPKSKLEV-- ---------- --GRIIECTH BACU018692/1-144 CCLRCIQTRD TNFGTNCICR VPKSKLEV-- ---------- --GRIIECTH 151 200 bmy_13995T0/1-232 AGSQLSSVCR AGSSSARTAA AGAALAEAVG PTPLRPGLWT ARVSACHATL ENSP00000386023/1-144 CG------CR GCSG------ ---------- ---------- ---------- ENSTTRP00000002819/1-144 CG------CR GCSG------ ---------- ---------- ---------- ENSBTAP00000036979/1-144 CG------CR GCSG------ ---------- ---------- ---------- BACU018692/1-144 CG------CR GCSG------ ---------- ---------- ---------- 201 250 bmy_13995T0/1-232 SWEQLLLRAV PQARVGTWSL RVKALVFISC DL ENSP00000386023/1-144 ---------- ---------- ---------- -- ENSTTRP00000002819/1-144 ---------- ---------- ---------- -- ENSBTAP00000036979/1-144 ---------- ---------- ---------- -- BACU018692/1-144 ---------- ---------- ---------- --