KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:15 2014 Check: 00 .. Name: bmy_13979T0/1-275 Len: 655 Check: 3213 Weight: 1.00 Name: ENSP00000306372/1-446 Len: 655 Check: 2314 Weight: 1.00 Name: ENSBTAP00000037032/1-447 Len: 655 Check: 1668 Weight: 1.00 Name: BACU012097/1-611 Len: 655 Check: 3798 Weight: 1.00 Name: ENSTTRP00000011677/1-447 Len: 655 Check: 4164 Weight: 1.00 // 1 50 bmy_13979T0/1-275 MRPDDQVSSA PPGLASRGRG WRCGRPGVSR RCWGPAPNQQ TTERRRPSIF ENSP00000306372/1-446 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000037032/1-447 ---------- ---------- ---------- ---------- ---------- BACU012097/1-611 MSPDDQVRGA PPGLASRGRG WRCGRPGVSR RCWGPAPNQQ TTERRRPSIF ENSTTRP00000011677/1-447 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_13979T0/1-275 LEGTSGCGGT GGGGGGGERT DPEAKRRELP FFVLSPVCGS VTGSDGAWSV ENSP00000306372/1-446 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000037032/1-447 ---------- ---------- ---------- ---------- ---------- BACU012097/1-611 LEGTSGCGGT GGGGGGGERT DPEAKRRELP FFVLSPVCGS VTGSDGAWSV ENSTTRP00000011677/1-447 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_13979T0/1-275 SGPPNLPSLP PGPTALASTK VRIPKNLNRG CQVPNNCYSG LLETNSREGR ENSP00000306372/1-446 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000037032/1-447 ---------- ---------- ---------- ---------- ---------- BACU012097/1-611 SGPPNLPSLP PGASSL---- ---------- ---------- ---------- ENSTTRP00000011677/1-447 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_13979T0/1-275 KESRSASSFS FKTCFLLTLQ IGDQRSELQA RPMETQADRV SQEPQALLEN ENSP00000306372/1-446 ---------- ---------- ---------- --METQADLV SQEPQALLDS ENSBTAP00000037032/1-447 ---------- ---------- ---------- --METQADRV SQEPQALLES BACU012097/1-611 ---------- XXXXXLLTLQ IGDQRSELQA RPMETQADRV SQEPQALLES ENSTTRP00000011677/1-447 ---------- ---------- ---------- --METQADRV SQEPQALLES 201 250 bmy_13979T0/1-275 ALPSSKVPAF SDKDSLGDEM LAAALLKAKA ---------- ---------- ENSP00000306372/1-446 ALP-SKVPAF SDKDSLGDEM LAAALLKAKS ---------- ---------- ENSBTAP00000037032/1-447 ALPSSKGPTF SDKGGLGDEM LAAALLKAKA ---------- ---------- BACU012097/1-611 ALPSSKVPAF SDKDSLGDEM LAAALLKAKA QPHPELAFGS ASPIPQPEIA ENSTTRP00000011677/1-447 ALPSSKVPAF SDKDSLGDEM LAAALLKAKA ---------- ---------- 251 300 bmy_13979T0/1-275 ---------- -------QMV RPELN----- --------MV QKF------- ENSP00000306372/1-446 ------QELV TFEDVAVYFI RKEWKRLEPA QRDLYRDVML ENYGNVFSLD ENSBTAP00000037032/1-447 ------QELV TFEDVAVYFI RKEWKRLEPA QRDLYRDVML ENYGNVFSLD BACU012097/1-611 RENMLFQELV TFEDVAVYFI RKEWKRLEPA QRDLYRDVML ENYGNVFSLD ENSTTRP00000011677/1-447 ------QELV TFEDVAVYFI RKEWKRLEPA QRDLYRDVML ENYGNVFSLD 301 350 bmy_13979T0/1-275 --------LK IQDHTGCY-- ---------- ---------- ---------- ENSP00000306372/1-446 RETRTENDQE ISEDTRSHGV LLGRFQKDIS QGLKFKEAYE REVSLKRPLG ENSBTAP00000037032/1-447 GETRTEPDSE ISEDRGSHGV LLGRFQKDIS QGLKFEEAYE QEVSLKRQLG BACU012097/1-611 GETRTEHGPE ISEDTGSHGV LLGRFQKDIS QGLKFEEAYE QEVSLKRQLG ENSTTRP00000011677/1-447 GETRTEHDPE ISEDTGSHGV LLGRFQKDIS QGLKFEEAYE QEVSLKRQLG 351 400 bmy_13979T0/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000306372/1-446 NSPGERLNRK MPDFGQVTVE EKLTPRGERS EKYNDFGNSF TVNSNLISHQ ENSBTAP00000037032/1-447 SSSGERLNRK MQEFGQVAAE EQRAPTGGRS EKCSDLRDSF TVSANLISHQ BACU012097/1-611 SSSGKRLNRK IQDFGQVTVE EKRTPMGGRS EKYSDLGNSF TVSSNLISQQ ENSTTRP00000011677/1-447 SSSGERLNRK IQDFGQVTVE EKRTPVGGRS EKYSDLGNSF TVSSNLISQQ 401 450 bmy_13979T0/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000306372/1-446 RLPVGDRPHK CDECSKSFNR TSDLIQHQRI HTGEKPYECN ECGKAFSQSS ENSBTAP00000037032/1-447 RLPVGDRPHK CDECSKSFNR TSDLIQHQRI HTGEKPYECS ECGKAFSQSS BACU012097/1-611 RLPVGDRPHK CDECSKSFNR TSDLIQHQRI HTGEKPYECS ECGKAFSQSS ENSTTRP00000011677/1-447 RLPVGDRPHK CDECSKSFNR TSDLIQHQRI HTGEKPYECS ECGKAFSQSS 451 500 bmy_13979T0/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000306372/1-446 HLIQHQRIHT GEKPYECSDC GKTFSCSSAL ILHRRIHTGE KPYECNECGK ENSBTAP00000037032/1-447 HLIQHQRIHT GEKPYECNDC GKTFSCSSAL ILHRRIHTGE KPYECNECGK BACU012097/1-611 HLIQHQRIHT GEKPYECNDC GKTFSCSSAL ILHRRIHTGE KPYECNECGK ENSTTRP00000011677/1-447 HLIQHQRIHT GEKPYECNDC GKTFSCSSAL ILHRRIHTGE KPYECNECGK 501 550 bmy_13979T0/1-275 ---WED---- ---------- -----SKRIF LRVLSL---- ---------- ENSP00000306372/1-446 TFSWSSTLTH HQRIHTGEKP YACNECGKAF SRSSTLIHHQ RIHTGEKPYE ENSBTAP00000037032/1-447 TFSWSSTLTH HQRIHTGEKP YACNECGKAF SRSSTLIHHQ RIHTGEKPYE BACU012097/1-611 TFSWSSTLTH HQRIHTGEKP YECNECGKTF SWSSTLTHHQ RIHTGEKPYE ENSTTRP00000011677/1-447 TFSWSSTLTH HQRIHTGEKP YACNECGKAF SRSSTLIHHQ RIHTGEKPYE 551 600 bmy_13979T0/1-275 ---------- ---------- ---------- ---------- ---------- ENSP00000306372/1-446 CNECGKAFSQ SSHLYQHQRI HTGEKPYECM ECGGKFTYSS GLIQHQRIHT ENSBTAP00000037032/1-447 CNECGKAFSQ SSHLYQHQRI HTGEKPYECM ECGGKFTYSS GLIQHQRIHT BACU012097/1-611 CNECGKAFSQ SSHLYQHQRI HTGEKPYECM ECGGKFTYSS GLIQHQRIHT ENSTTRP00000011677/1-447 CNECGKAFSQ SSHLYQHQRI HTGEKPYECM ECGGKFTYSS GLIQHQRIHT 601 650 bmy_13979T0/1-275 ---------- ---------- ---------K KPMN------ ---------- ENSP00000306372/1-446 GENPYECSEC GKAFRYSSAL VRHQRIHTGE KPLNGIGMSK SSLRVTTELN ENSBTAP00000037032/1-447 GENPYECSEC GKAFRYSSAL VRHQRIHTGE KPLNVMGVSK SSLQVTAEVN BACU012097/1-611 GENPYECSEC GKAFRYSSAL VRHQRIHTGE KPLNVMGVSK SSLRVTAELN ENSTTRP00000011677/1-447 GENPYECSEC GKAFRYSSAL VRHQRIHTGE KPLNVMGVSK SSLRVTAELN 651 700 bmy_13979T0/1-275 --KSV ENSP00000306372/1-446 IREST ENSBTAP00000037032/1-447 IREST BACU012097/1-611 IREST ENSTTRP00000011677/1-447 IREST