KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:16 2014 Check: 00 .. Name: bmy_18706T0/1-392 Len: 526 Check: 5691 Weight: 1.00 Name: ENSP00000429744/1-519 Len: 526 Check: 1513 Weight: 1.00 Name: BACU019147/1-460 Len: 526 Check: 3256 Weight: 1.00 Name: ENSTTRP00000005940/1-480 Len: 526 Check: 7868 Weight: 1.00 Name: ENSBTAP00000037040/1-491 Len: 526 Check: 3993 Weight: 1.00 // 1 50 bmy_18706T0/1-392 ---------- ---------- --------ME QPPAPKSKLK KLSEDSLTKQ ENSP00000429744/1-519 MLQLMDSGIT ICLRNGAASV FKKKEWSTQG EENKQDSKLK KLSEDSLTKQ BACU019147/1-460 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005940/1-480 ---------- ---------- ---------- -------KLK KLSEDSLTKQ ENSBTAP00000037040/1-491 ---------- ---------- --------ME QPPAPKSKLK KLSEDSLTKQ 51 100 bmy_18706T0/1-392 PEEVFDVLEK LGEGSYGSVF KAIHKESGQV VAIKQVPVES DLQEIIKEIS ENSP00000429744/1-519 PEEVFDVLEK LGEGSYGSVF KAIHKESGQV VAIKQVPVES DLQEIIKEIS BACU019147/1-460 ---------- ----SYGSVF KAIHKESGQV VAIKQVPVES DLQEIIKEIS ENSTTRP00000005940/1-480 PEEVFDVLEK LGEGSYGSVF KAIHKESGQV VAIKQVPVES DLQEIIKEIS ENSBTAP00000037040/1-491 PEEVFDVLEK LGEGSYGSVF KAIHKESGQV VAIKQVPVES DLQEIIKEIS 101 150 bmy_18706T0/1-392 IMQQCDSPYV VKYYGSYFKN TDLWIVMEYC GAGSVSDIIR LRNKTLTEDE ENSP00000429744/1-519 IMQQCDSPYV VKYYGSYFKN TDLWIVMEYC GAGSVSDIIR LRNKTLIEDE BACU019147/1-460 IMQQCDSPYV VKYYGSYFKN TDLWIVMEYC GAGSVSDIIR LRNKTLTEDE ENSTTRP00000005940/1-480 IMQQCDSPYV VKYYGSYFKN TDLWIVMEYC GAGSVSDIIR LRNKTLTEDE ENSBTAP00000037040/1-491 IMQQCDSPYV VKYYGSYFKN TDLWIVMEYC GAGSVSDIIR LRNKTLTEDE 151 200 bmy_18706T0/1-392 IATILKSTLK GLEYLHFMRK IHRDIKAGNI LLNTEGHAKL ADFGVAGQLT ENSP00000429744/1-519 IATILKSTLK GLEYLHFMRK IHRDIKAGNI LLNTEGHAKL ADFGVAGQLT BACU019147/1-460 IATILKSTLK GLEYLHFMRK IHRDIKAGNI LLNTEGHAKL ADFGVAGQLT ENSTTRP00000005940/1-480 IATILKSTLK GLEYLHFMRK IHRDIKAGNI LLNTEGHAKL ADFGVAGQLT ENSBTAP00000037040/1-491 IATILKSTLK GLEYLHFMRK IHRDIKAGNI LLNTEGHAKL ADFGVAGQLT 201 250 bmy_18706T0/1-392 DTMAKRNTVI GTPFWMAPEV IQEIGYNCVA DIWSLGITSI EMAEGKPPYA ENSP00000429744/1-519 DTMAKRNTVI GTPFWMAPEV IQEIGYNCVA DIWSLGITSI EMAEGKPPYA BACU019147/1-460 DTMAKRNTVI GTPFWMAPEV IQEIGYNCVA DIWSLGITSI EMAEGKPPYA ENSTTRP00000005940/1-480 DTMAKRNTVI GTPFWMAPEV IQEIGYNCVA DIWSLGITSI EMAEGKPPYA ENSBTAP00000037040/1-491 DTMAKRNTVI GTPFWMAPEV IQEIGYNCVA DIWSLGITSI EMAEGKPPYA 251 300 bmy_18706T0/1-392 DIHPMR---- ---RSPPH-- ---------- ---NKLLARV SDPRSPSAGV ENSP00000429744/1-519 DIHPMRAIFM IPTNPPPTFR KPELWSDDFT DFVKKCLVKN PEQRATATQL BACU019147/1-460 DIHPMRAIFM IPTNPPPTFR KPELWSDDFT DFVKKCLVKN PEQRATATQL ENSTTRP00000005940/1-480 DIHPMRAIFM IPTNPPPTFR KPELWSDDFT DFVKKCLVKN PEQRATATQL ENSBTAP00000037040/1-491 DIHPMRAIFM IPTNPPPTFR KPELWSDDFT DFVKKCLVKN PEQRATATQL 301 350 bmy_18706T0/1-392 LCTPIQVASS PQPNL----- ---------- -PAGEQLEGP KQAQDSD--- ENSP00000429744/1-519 LQHPFIKNAK PVSILRDLIT EAMEIKAKRH EEQQRELEEE EENSDEDELD BACU019147/1-460 LQHSFIKNAK PVSILRDLIT EAMEIKAKRH EEQQRELEEE EENSDEDELD ENSTTRP00000005940/1-480 LQHPFIKNAK PVSILRDLIT EAMEIKAKRH EEQQRELE-- EENSDEDELD ENSBTAP00000037040/1-491 LQHPFIKNAK PVSILRDLIT EAMEIKAKRH EEQQRELEEE EENSDEDELD 351 400 bmy_18706T0/1-392 ------PCSP TLGIAR---- ---------- ---------- ---------- ENSP00000429744/1-519 SHTMVKTSVE SVGTMRATST MSEGAQTMIE HNSTMLESDL GTMVINSEDE BACU019147/1-460 SHTMVKTSSE SVGTMRATST MSEGAQTMIE HNSTMLESDL GTMVINSEDE ENSTTRP00000005940/1-480 SHTMVKTSSE SVGTMRATST MSEGAQTMIE HNSTMLESDL GTMVINSEDE ENSBTAP00000037040/1-491 SHTMVKTSSE SVGTMRATST MSEGAQTMIE HNSTMLESDL GTMVINSEDE 401 450 bmy_18706T0/1-392 ---------T PMKTSGKPPN PLVKQLSDVF ETEDPR---- ------LSLP ENSP00000429744/1-519 EEED-----G TMKRNATSPQ VQRPSFMDYF DKQDFKNKSH ENCNQNMHEP BACU019147/1-460 EEEDGTMKNG TMKRNATSPQ VQRPSFMDYF DKQDFKNKSH ENCNQNMHEP ENSTTRP00000005940/1-480 EEED-----G TMKRNATSPQ VQRPSFMDYF DKQDFKNKSH ENCNQNMHEP ENSBTAP00000037040/1-491 EEED-----G TMKRNATSPQ VQRPSFMDYF DKQDFKNKSH ENCNQNMHEP 451 500 bmy_18706T0/1-392 ---PEPILPL ETPSSSQLDL PLGTQFSLED QTETPFQAGV FQGGNRTSLR ENSP00000429744/1-519 FPMSKNVFPD NWKVPQDGDF DFLKNLSLEE LQMRLKALDP MMEREIEELR BACU019147/1-460 FPMSKNVFPD NWKVPQDGDF DFLKNLSLEE LQMRLKALDP MMEREIEELR ENSTTRP00000005940/1-480 FPMSKNVFPD NWKVPQDGDF DFLKNLSLEE LQMRLKALDP MMEREIEELR ENSBTAP00000037040/1-491 FPMSKNVFPD NWKVPQDGDF DFLKNLSLEE LQMRLKALDP MMEREIEELR 501 550 bmy_18706T0/1-392 DPYS---QPG LGQALERPRH SLIFRF ENSP00000429744/1-519 QRYTAKRQPI LDAMDAKKRR QQNF-- BACU019147/1-460 QRYTAKRQPI LDAMDAKKRR QQNF-- ENSTTRP00000005940/1-480 QRYTAKRQPI LDAMDAKKRR QQNF-- ENSBTAP00000037040/1-491 QRYTAKRQPI LDAMDAKKRR QQNF--