KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:16 2014 Check: 00 .. Name: ENSP00000309689/1-683 Len: 724 Check: 256 Weight: 1.00 Name: ENSBTAP00000037062/1-658 Len: 724 Check: 3907 Weight: 1.00 Name: bmy_16113T0/1-720 Len: 724 Check: 7835 Weight: 1.00 Name: BACU012075/1-687 Len: 724 Check: 3320 Weight: 1.00 Name: ENSTTRP00000008434/1-464 Len: 724 Check: 68 Weight: 1.00 // 1 50 ENSP00000309689/1-683 MAAAVAAPLA AGGEEAAATT SVPGSPGLPG RRSAERALEE AVATGTLNLS ENSBTAP00000037062/1-658 MAAAVAAPLA AGGEEAAATT SVPGSPGLPG SRSAERALEE AVATGTLNLS bmy_16113T0/1-720 MAAAVAASLA AGGEEAATTT SVPGSPGLPG SRSAERALEE AVATGTLNLS BACU012075/1-687 MAAAVAASLA AGGEEAATTT SVPGSPGLPG SRSAERALEE AVATGTLNLS ENSTTRP00000008434/1-464 MAAAVAASLA AGGEEAAATT SVPGSPGLPG SRSAERALEE AVATGTLNLS 51 100 ENSP00000309689/1-683 NRRLKHFPRG AARSYDLSDI TQADLSRNRF PEVPEAACQL VSLEGLSLYH ENSBTAP00000037062/1-658 NRRLKHFPRG AARSYDLSDI TQADLSRNRF PEVPEAACQL VSLEGLSLYH bmy_16113T0/1-720 NRRLKHFPRG AARSYDLSDI TQADLSRNRF PEVPEAACQL VSLEGLSLYH BACU012075/1-687 NRRLKHFPRG AARSYDLSDI TQADLSRNRF PEVPEAACQL VSLEGLSLYH ENSTTRP00000008434/1-464 NRRLKHFPRG AARSYDLSDI TQADLSRNRF PEVPEAACQL VSLEGLSLYH 101 150 ENSP00000309689/1-683 NCLRCLNPAL GNLTALTYLN LSRNQLSLLP PYICQLPLRV LIVSNNKLGA ENSBTAP00000037062/1-658 NCLRCLNPAL GNLTALTYLN LSRNQLSSLP PYICQLPLRV LIVSNNKLGA bmy_16113T0/1-720 NCLRCLNPAL GNLTALTYLN LSRNQLSSLP PYICQLPLRV LIVSNNKLGA BACU012075/1-687 NCLRCLNPAL GNLTALTYLN LSRNQLSSLP PYICQLPLRV LIVSNNKLGA ENSTTRP00000008434/1-464 NCLRCLNPAL GNLTALTYLN LSRNQLSSLP PYICQLPLRV LIVSNNKLGA 151 200 ENSP00000309689/1-683 LPPDIGTLGS LRQLDVSSNE LQSLPSELCG LSSLRDLNVR RNQLSTLPEE ENSBTAP00000037062/1-658 LPPDISALGS LRQLDVSSNE LQSLPTELCS LPTLRDLNVR RNQLSTLPDE bmy_16113T0/1-720 LPPDISALAS LRQLDASSNE LQSLPAELCG LPSLRDLNVR RNQLSTLPDE BACU012075/1-687 LPPDISALAS LRQLDASSNE LQSLPAELCG LPSLRDLNVR RNQLSTLPDE ENSTTRP00000008434/1-464 LPPDISALGS LRQLDVSSNE LPSLPAELCG LPSLRDLNVR RNQLSALPDE 201 250 ENSP00000309689/1-683 LGDLPLVRLD FSCNRVSRIP VSFCRLRHLQ VILLDSNPLQ SPPAQVCLKG ENSBTAP00000037062/1-658 LGDLPLVRLD FSCNRVSRIP VSFCRLRHLQ VILLDSNPLQ SPPAQICLKG bmy_16113T0/1-720 LGDLPLVRLD FSCNRVSRIP VSFCRLRHLQ VILLDSNPLQ SPPAQICLKG BACU012075/1-687 LGDLPLVRLD FSCNRVSRIP VSFCRLRHLQ VILLDSNPLQ SPPAQICLKG ENSTTRP00000008434/1-464 LGDLPLVRLD FSCNRVSRIP VSFCRLRHLQ VILLDSNPLQ SPPAQICLKG 251 300 ENSP00000309689/1-683 KLHIFKYLST EAGQR-GSAL GDLAPSRPPS FSPCPAEDLF PGHRYDGGLD ENSBTAP00000037062/1-658 KLHIFKYLST EAGRRGGSAL GDLAPSRPPS FSPCPAEDLF PGRRYDGGLD bmy_16113T0/1-720 KLHIFKYLST EAGRRGGSAL GDLAPSRPPS FSPCPAEDLF PGRRYDGGLD BACU012075/1-687 KLHIFKYLST EAGRRGGSAL GDLAPSRPPS FSPCPAEDLF PGRRYDGGLD ENSTTRP00000008434/1-464 KLHIFKYLST EAGRRGGSAL GDLAPSRPPS FSPCPAEDLF PGRRYDGGLD 301 350 ENSP00000309689/1-683 SGFHSVDSGS KRWSGNESTD EFSELSFRIS ELAREPRGPR ERKEDGSADG ENSBTAP00000037062/1-658 SGFHSVDSGS KRWSGNESTD EFSELSFRIS ELAREPRGPR ERKEDGSADG bmy_16113T0/1-720 SGFHSVDSGS KRWSGNESTD EFSELSFRIS ELAREPRGPR ERREDGSADG BACU012075/1-687 SGFHSVDSGS KRWSGNESTD EFSELSFRIS ELAREPRGPR ERREDGSADG ENSTTRP00000008434/1-464 SGFHSVDSGS KRWSGNESTD EFSELSFRIS ELAREPRGPR ERREDGSADG 351 400 ENSP00000309689/1-683 DPVQIDFIDS HVPGEDEERG TVEEQRPPEL SPGAGDRERA PSSRREEPAG ENSBTAP00000037062/1-658 DPEQIDFIDS HVPGEDEERG TGEEPRPPES SPAAGDGERA PSSRREEPAG bmy_16113T0/1-720 DPEQVDFIDS HVPGEDEERG AGEEQRPPES SPVAGDGERA PSSRREEPSG BACU012075/1-687 DPEQVDFIDS HVPGEDEERG AGEEQRPPES SPVAGDGERA PSSRREEPSG ENSTTRP00000008434/1-464 DPEQVDFIDS HVPGEDEERG AGEEQRPPES SPVAGDGERA PSSRREEPAG 401 450 ENSP00000309689/1-683 EERRRPDTLQ LWQERERR-- -QQQQSGAWG APRKDSLLKP GLRAVVGGAA ENSBTAP00000037062/1-658 EERRRPDTLQ LWQERERRQQ QQQQQSVVWG APRKDSFLKL GVRAAGGGPG bmy_16113T0/1-720 EERRRPDTLQ LWQERERR-- QQQQQSGVWG SPRKDSFPKL GVRAAGGGAA BACU012075/1-687 EERRRPDTLQ LWQERERRQQ QQQQQSGLWG SPRKDSFPKL GVRAPGGGAA ENSTTRP00000008434/1-464 EERRRPDTLQ LWQERERR-- -QQQQSGVWG SPRKDSFPKL GVRASGGGAA 451 500 ENSP00000309689/1-683 AVSTQAMHN- ---------- ---------- ---------- GSPKSSASQA ENSBTAP00000037062/1-658 ASSTQATYN- ---------- ---------- ---------- GTSRSNTTQL bmy_16113T0/1-720 ASSAQATYKY VCSWTPPPSV LALHPLPLSI PPDSPSVSPQ RHAQVQCHPA BACU012075/1-687 ASSAQATYN- ---------- ---------- ---------- GTPKSNATQL ENSTTRP00000008434/1-464 ASSAQATYN- ---------- ---------- ---------- GKPKSNAT-- 501 550 ENSP00000309689/1-683 GAAAGQGAPA PAPA--SQEP LPIAGPATAP A---PRPLGS IQRPNSFLFR ENSBTAP00000037062/1-658 GASAGQGAPT PALASTSQEP PLPSGPATAP A---PRPLSS IQRPNSFLFR bmy_16113T0/1-720 GSFGGAGCSH PRLH--HPGA PSYSGTRQRQ AMWVPDPATR LQSRWCVVEA BACU012075/1-687 GAPGGQGAPT PAST--SQEP LPTAGPASAP A---ARPLSS IQRPNSFLFR ENSTTRP00000008434/1-464 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000309689/1-683 SSSQS-GSGP SSPDSVLRPR RYPQVPDEKD LMTQLRQVLE SRLQRPLPED ENSBTAP00000037062/1-658 SSSQS-SSGP SSPDTVSRPR RSPQLLDEKE VMAQLRQVLE CQLQRPLPDD bmy_16113T0/1-720 APYPPLSPGP SSPDSVLRPR RSPQLLDEKE VMAQLRQVLE SQLQRPLPED BACU012075/1-687 SSSQS-SSGP SSPDSVLRPR RSPQLLDEKE VMAQLRQVLE SQLQRPLPED ENSTTRP00000008434/1-464 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000309689/1-683 LAEALASGVI LCQLANQLRP RSVPFIHVPS PAVPKLSALK ARKNVESFLE ENSBTAP00000037062/1-658 LAEALANGVI LCQLANQLRP RCVPFIHVPS PAVPKLSALK SRKNVESFLE bmy_16113T0/1-720 LAEALASGVI LCQLANQLRP RSVPFIHVPS PAVPKLSALK SRKNVESFLE BACU012075/1-687 LAEALASGVI LCQLANQLRP RSVPFIHVPS PAVPKLSALK SRKNVESFLE ENSTTRP00000008434/1-464 ---------- ---------- ---------- ---------- ---------- 651 700 ENSP00000309689/1-683 ACRKMGVPEA DLCSPSDLLQ GTARGLRTAL EAVKRVGGKA LPPLWPPSGL ENSBTAP00000037062/1-658 ACRKMGVPEE SLCQPHHILE EEG------- -----APGKG LP-------- bmy_16113T0/1-720 ACRKMGVPEA DLCSPSDLLQ GTAQGLWTTL EAVKRAGGRS PPPLWPPSGL BACU012075/1-687 ACRKMGVPEA DLCSPSDLLQ GTAQGLWTTL EAVKRAGGRS PPPLWPPSGL ENSTTRP00000008434/1-464 ---------- ---------- ---------- ---------- ---------- 701 750 ENSP00000309689/1-683 GGFVVFYVVL MLLLYVTYTR LLGS ENSBTAP00000037062/1-658 ---------- -YVAAVIHAL LERP bmy_16113T0/1-720 GGFILFYVVL MLLLCVVYTR LLGS BACU012075/1-687 GGFILFYVVL MLLLCVVYTR LLGS ENSTTRP00000008434/1-464 ---------- ---------- ----