KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:20 2014 Check: 00 .. Name: ENSP00000309126/1-470 Len: 501 Check: 1298 Weight: 1.00 Name: ENSBTAP00000037133/1-462 Len: 501 Check: 2322 Weight: 1.00 Name: BACU012031/1-466 Len: 501 Check: 9834 Weight: 1.00 Name: bmy_19535T0/1-340 Len: 501 Check: 4873 Weight: 1.00 Name: ENSTTRP00000005789/1-84 Len: 501 Check: 7217 Weight: 1.00 // 1 50 ENSP00000309126/1-470 MGLYAAAAGV LAGVESRQGS IKGLVYSSNF QNVKQLYALV CETQRYSAVL ENSBTAP00000037133/1-462 MAVYSAAAAV LAGVESRQGS LKGLVYASNF QNVKQLYALV CETQRYSAVL BACU012031/1-466 MALYAAAAAV LAGVESRQGS LKGLVYGSSF QNVKQLYALV CETQRYSAVL bmy_19535T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000309126/1-470 DAVIASAGLL RAEKKLRPHL AKVLVYELLL GKGFRGGGGR WKALLGRHQA ENSBTAP00000037133/1-462 DAVIANAGLL RAEKKLRPHL AKVLVYDLLL GKGFRGRGGR WKPLLERHQA BACU012031/1-466 DAVIASAGLL RAEKKLRPHL AKVLVYELLM GRGIKGRGGR WKPLLDRHQA bmy_19535T0/1-340 ---------- ---------- ---------- ---------M WN-------- ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000309126/1-470 RLKAELARLK VHRGVSRNED LLEVGSRPGP ASQLPRFVRV NTLKTCSDDV ENSBTAP00000037133/1-462 RLKAELARLK VRQGVSRNED LLEVGSKPGS ASQVPRFVRV NILKTCAEDA BACU012031/1-466 RLKAELARLK VRRGVSQNED LLEGGSKPGP ASQVPRFVRV NTLKTCSEDA bmy_19535T0/1-340 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000309126/1-470 VDYFKRQGFS YQGRASSLDD LRALKGKHFL LDPLMPELLV FPAQTDLHEH ENSBTAP00000037133/1-462 IDYFKRQGFS YQGRASSLND IRALKGKCFL LDPLLPELLV FPAQTDLHNH BACU012031/1-466 VDYFKRQGFS YQGRASSLED IRALKGKCFL LDSLLPELLV FPARTDLHEH bmy_19535T0/1-340 ------EQFL FPG---SLED IRALKGKCFL LDSLLPELLV FPARTDLHEH ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000309126/1-470 PLYRAGHLIL QDR------- ---------- ---------- ---ASCLPAM ENSBTAP00000037133/1-462 PLYQAGHLIL QDK------- ---------- ---------- ---ASCLPAM BACU012031/1-466 PLYQAGHLIL QDK------- ---------- ---------- ---ASSLPAM bmy_19535T0/1-340 PLYQAGHLIL QDKVGWMGGK GRSGRRVISL GSLSASPCAL RRQASSLPAM ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000309126/1-470 LLDPPPGSHV IDACAAPGNK TSHLAALLKN QGKIFAFDLD AKRLASMATL ENSBTAP00000037133/1-462 LLAPPPGSHV IDACAAPGNK TSHLAALLKN QGKIFAFDQD AKRLASMATL BACU012031/1-466 LLAPPPGSHV IDACAAPGNK TSHLAALLKN QGKIFAFDLD AKRLASTATL bmy_19535T0/1-340 LLAPPPGSHV IDACAAPGNK TSHLAALLKN QGKIFAFDLD AKRLASTATL ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000309126/1-470 LARAGVSCCE LAEEDFLAVS PSDPRYHEVH YILLDPSCSG SGMPSRQLEE ENSBTAP00000037133/1-462 LARAGVSCCE LAEQDFLAVS PSDQRYCQVQ YILLDPSCSG SGMPSRQLEE BACU012031/1-466 LARAGVSCCE LAERDFLEVS PSDQRYRRVQ YILLDPSCSG SGMLTRQLEE bmy_19535T0/1-340 LARAGVSCCE LAERDFLEVS PSDQRYRRVQ YILLDPSCSG SGMLTRQLEE ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000309126/1-470 PGAGTPSPVR LHALAGFQQR ALCHALTFPS LQRLVYSTCS LCQEENEDVV ENSBTAP00000037133/1-462 PKSCTPSPER LRALAAFQQR ALSHALTFPA LRRLVYSTCS VCQEENEDVV BACU012031/1-466 PGPGVPSQER LRALAAFQQR ALSHALTFPA LRRLVYSTCS LYQEENEDVV bmy_19535T0/1-340 PGTGVPSQER LRALAAFQQR ALSHALTFPA LRRLVYSTCS LYQEENEDVV ENSTTRP00000005789/1-84 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000309126/1-470 RDALQQNPGA FRLAPALPAW PHRGLSTFPG AEHCLRASPE TTLSSGFFVA ENSBTAP00000037133/1-462 RAALQQSPGA FRLAPVLPSW PHRGLSAFPG AEHCLRASPE TTLTGGFFIA BACU012031/1-466 QAALQRSPAA FRLAPVLPSW PHRGLGTFPG AEHCLRASPE TTLTGGFFVA bmy_19535T0/1-340 RAALQRSPAA FRLAPVLPSW PHRGLGTFPG AEHCLRASPE TTLTGGFFVA ENSTTRP00000005789/1-84 ---------- --LAPVLPSW PHRGLGTFPG AEHCLRASPE TTLTGGFFTA 451 500 ENSP00000309126/1-470 VIERVEVPSL TGQSISTRTH TQPSPKEKEE TAKSRSRCLH TALHIAEAPG ENSBTAP00000037133/1-462 VLERVEEPSS GSQAKAAASE LTPSPAPKGK KRRRKA---- -----AAAPG BACU012031/1-466 VLERVEVPSS VSQAEASAPE VTPNPAPKRK KRRRKATAAP -----SSQPD bmy_19535T0/1-340 VLERVEVPSS VSQAEASAPE VTPNPAPKRK KRRRKATAAP -----SSQPD ENSTTRP00000005789/1-84 VLERVEVPSS VSQAEASAPE VTPNPAPKRK KRRRKATAAP -----SSQPG 501 550 ENSP00000309126/1-470 - ENSBTAP00000037133/1-462 T BACU012031/1-466 M bmy_19535T0/1-340 M ENSTTRP00000005789/1-84 M