KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:20 2014 Check: 00 .. Name: ENSP00000335416/1-257 Len: 357 Check: 3184 Weight: 1.00 Name: ENSBTAP00000037154/1-334 Len: 357 Check: 2307 Weight: 1.00 Name: BACU002329/1-316 Len: 357 Check: 5916 Weight: 1.00 Name: bmy_18449T0/1-352 Len: 357 Check: 9919 Weight: 1.00 Name: ENSTTRP00000016341/1-257 Len: 357 Check: 5149 Weight: 1.00 // 1 50 ENSP00000335416/1-257 MIDKNQTCGV GQDSVPYMIC LIHILEEWFG VEQLEDYLNF ANYLLWVFTP ENSBTAP00000037154/1-334 MTNKNQSFGV GQDSMSSMTC LIHVLEAWFG VEHLEDYWNF ANYLLWVFTP BACU002329/1-316 ---------- ----MPYMTC LIHVLEEWFG VEQLEDYWNF ANYLLWVFTP bmy_18449T0/1-352 MIDKNQTCGT GQDPMPYMTC LIHVLEEWFG VEQLEDYWNF ANYLLWVFTP ENSTTRP00000016341/1-257 MIDKNQTCGT GQDSMPSMTC LIHVLEEWFG VEQLEDYWNF ANYLLWVFTP 51 100 ENSP00000335416/1-257 LILLILPYFT IFLLYLTIIF LHIYKRKNVL KEAYSHNLWD GARKTVATLW ENSBTAP00000037154/1-334 LLLLILPYFT IFLLYLTIIF LHIYKRKNVL KEAYSHNLWD GARKTVATLW BACU002329/1-316 LILLILPYFT IFLLYLTIIF LHIYKKKNVL KEAYSHNLWD GARKTVATLW bmy_18449T0/1-352 LILLILPYFT IFLLYLTIIF LHIYKRKNVL KEAYSHNLWD GARKTVATLW ENSTTRP00000016341/1-257 LILLILPYFT IFLLYLTIIF LHIYKRKNVL KEAYSHNLWD GARKTVATLW 101 150 ENSP00000335416/1-257 DGHAAVWHGY EVHGMEKIPE DGPALIIFYH GAIPIDFYYF MAKIFIHKGR ENSBTAP00000037154/1-334 DGHAAVWHGY EVHGMEKIPE EGPALIIFYH GAIPIDFYYF MAKIFIHKGR BACU002329/1-316 DGHAAVWHGY EVHGMEKIPE EGPALIIFYH GAIPIDFYYF MAKIFIHKGR bmy_18449T0/1-352 DGHAAVWHGY EVHGMEKIPE -GPALIIFYH GAIPIDFYYF MAKIFIHKGR ENSTTRP00000016341/1-257 DGHAAVWHGY EVHGMEKIPE -GPALIIFYH GAIPIDFYYF MAKIFIHKGR 151 200 ENSP00000335416/1-257 TCRVVADHFV FKIPGFSLLL DVFCALHGPR EKCVEILRSG HLLAISPGGV ENSBTAP00000037154/1-334 TCRVVADHFV FKIPGFSLLL DVFCAIHGPR EKCVEILQSG HLLAISPGGV BACU002329/1-316 TCRVVADHFV FKIPGFSLLL DVFCAIHGPR EKCVEILRSG HLLAISPGGV bmy_18449T0/1-352 TCRVVADHFV FKIPGFSLLL DVFCAIHGPR EKCVEILRSG HLLAISPGGV ENSTTRP00000016341/1-257 TCRVVADHFV FKIPGFSLLL DVFCAIHGPR EKCVEILRSG HLLAISPGGV 201 250 ENSP00000335416/1-257 REALISDETY NIVWGHRRGF AQVAIDAKV- ---------- ---------- ENSBTAP00000037154/1-334 REALMSDETY NIVWGNRKGF AQVAIDAKV- ---------- ---------- BACU002329/1-316 REALISDETY NIVWGNRKGF AQVAIDAKV- ---------- ---------- bmy_18449T0/1-352 REALISDETY NIVWGNRKGF AQVAIDAKVS YNKIKYIELY SLLYIFVYVI ENSTTRP00000016341/1-257 REALISDETY NIVWGNRKGF AQVAIDAKV- ---------- ---------- 251 300 ENSP00000335416/1-257 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000037154/1-334 --PIIPMFTQ NIREGFRSLG GTRLFRWLYE KFRYPFAPMY GGFPVKLRTY BACU002329/1-316 --PIIPMFTQ NIREGFRSLG GTRLFRWLYE KFRYPFAPMY GGFPVKLRTY bmy_18449T0/1-352 PKPIIPMFTQ NIREGFRSLG GTRLFRWLYE KFRYPFAPMY GGFPVKLRTY ENSTTRP00000016341/1-257 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000335416/1-257 ---------- ---------T KNAVQALIDK HQRIPGNIMS ALLERFH--- ENSBTAP00000037154/1-334 LGDPIPYDPK ITAEELAEKT KDAVQALIDK HQRIPGNIMS ALLERFRNKQ BACU002329/1-316 LGDPIPYDPK ITAEELAART KDAVQALIDK HQRIPGNVMS ALLERFHNKQ bmy_18449T0/1-352 LGDPIPYDPK ITAEELAEKT KDAVQALIDK HQRIPGNVMS ALLERFHNKQ ENSTTRP00000016341/1-257 ---------- ---------T KDAVQALIDK HQRIPGNIMS ALLERFHN-- 351 400 ENSP00000335416/1-257 ------- ENSBTAP00000037154/1-334 KINQKTL BACU002329/1-316 KIN---- bmy_18449T0/1-352 KIN---- ENSTTRP00000016341/1-257 -------