KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:20 2014 Check: 00 .. Name: BACU011942/1-905 Len: 960 Check: 3421 Weight: 1.00 Name: ENSTTRP00000012469/1-923 Len: 960 Check: 3720 Weight: 1.00 Name: ENSBTAP00000037160/1-868 Len: 960 Check: 5893 Weight: 1.00 Name: bmy_00739T0/1-899 Len: 960 Check: 7723 Weight: 1.00 // 1 50 BACU011942/1-905 ----MSEMHR ---------- ---------- ---------- ---------- ENSTTRP00000012469/1-923 RVLSLSPLEM DPRVLGIPAP RGAFKGLSPL GLDSAXXXXX XXXXGPWSTA ENSBTAP00000037160/1-868 ---------- ---------- ---------- ---------- ---------- bmy_00739T0/1-899 MLIEVRDTRR D--------- ---------- ---------- ---------- 51 100 BACU011942/1-905 -----FGSED DQESPPRERP ENRAPQAAPS QEGSPDKRPA QFYGASGPQS ENSTTRP00000012469/1-923 VLSSGMEPEA ALWGPDLQGP E-LSPDDAHR ---------- ---------- ENSBTAP00000037160/1-868 -----MEPET ALWGPDLQDP G-QSPDDGHP ---------- ---------- bmy_00739T0/1-899 -----CGPDK TV--APVQGG A-QTLGETQG REVTLGPCSE RKWGLETPFL 101 150 BACU011942/1-905 SRGRKQGPEG TEDDPPGEGE APVEHLFPGL TGTSPEGSLE HWAVLSSGME ENSTTRP00000012469/1-923 --G---ADSG NEEESP-QQE SSGEEVILGD PAQSPE---- ------FKDP ENSBTAP00000037160/1-868 --G---AESG NEEEST-QHE SSGEEVILGD PDQSPE---- ------FKDP bmy_00739T0/1-899 SVG---ADSG NEEESP-QQE SSGEEVILGD PTQSPE---- ------FKDP 151 200 BACU011942/1-905 PEAALWGP-- DLQGPELSP- ---DDAHRDH QTPLDPPTPE VVPTPSDWTK ENSTTRP00000012469/1-923 PEMPLETPSQ DPSVPQDPPA PLGHSNPSDH QTPLDPPTPE VVPTPSDWTK ENSBTAP00000037160/1-868 SEMPLETPSQ DASGPQDAPA PLGHANPSDH QTPLDTPSPE VVPTPSDWTK bmy_00739T0/1-899 PEMPLETPSQ DPSVPQDPPA PLGHSNPSDH QTPLDPPTPE VVPTPSDWTK 201 250 BACU011942/1-905 ACEASWQWGT LTTWNSPPVV PANEPSLREL VQGRPSGAEK PYICNECGKS ENSTTRP00000012469/1-923 ACEASWQWGT LTTWNSPPVV PANEPSLREL VQGRPSGAEK PYICNECGKS ENSBTAP00000037160/1-868 ACEASWQWGT LTTWNSPPVV PANEPSLREL VQGRPAGAEK PYICNECGKS bmy_00739T0/1-899 ACEASWQWGT LTTWNSPPVV PANEPSLREL VQGRPSGAEK PYICNECGKS 251 300 BACU011942/1-905 FSQWSKLLRH QRIHTGERPN TCSECGKSFT QSSHLVQHQR THTGEKPYKC ENSTTRP00000012469/1-923 FSQWSKLLRH QRIHTGERPN TCSECGKSFT QSSHLVQHQR THTGEKPYKC ENSBTAP00000037160/1-868 FSQWSKLLRH QRIHTGERPN TCSECGKSFT QSSHLVQHQR THTGEKPYKC bmy_00739T0/1-899 FSQWSKLLRH QRIHTGERPN TCSECGKSFT QSSHLVQHQR THTGEKPYKC 301 350 BACU011942/1-905 PDCGKCFSWS SNLVQHQRTH TGEKPYKCTE CEKAFTQSTN LIKHQRSHTG ENSTTRP00000012469/1-923 PDCGKCFSWS SNLVQHQRTH TGEKPYKCTE CEKAFTQSTN LIKHQRSHTG ENSBTAP00000037160/1-868 PDCGKCFSWS SNLVQHQRTH TGEKPYKCTE CEKAFTQSTN LIKHQRSHTG bmy_00739T0/1-899 PDCGKCFSWS SNLVQHQRTH TGEKPYKCTE CEKAFTQSTN LIKHQRSHTG 351 400 BACU011942/1-905 EKPYKCGECR RAFYRSSDLI QHQATHTGEK PYKCPECGKR FGQNHNLLKH ENSTTRP00000012469/1-923 EKPYKCGECR RAFYRSSDLI QHQATHTGEK PYKCPECGKR FGQNHNLLKH ENSBTAP00000037160/1-868 EKPYKCGECR RAFYRSSDLI QHQATHTGEK PYKCPECGKR FGQNHNLLKH bmy_00739T0/1-899 EKPYKCGECR RAFYRSSDLI QHQATHTGEK PYKCPECGKR FGQNHNLLKH 401 450 BACU011942/1-905 QKIHAGEKPY RCTECGKSFI QSSELTQHQR THTGEKPYEC LECGKSFGHS ENSTTRP00000012469/1-923 QKIHAGEKPY RCTECGKSFI QSSELTQHQR THTGEKPYEC LECGKSFGHS ENSBTAP00000037160/1-868 QKIHAGEKPY RCTECGKSFI QSSELTQHQR THTGEKPYEC LECGKSFGHS bmy_00739T0/1-899 QKIHAGEKPY RCTECGKSFI QSSELTQHQR THTGEKPYEC LECGKSFGHS 451 500 BACU011942/1-905 STLIKHQRTH LREDPFKCPV CGKTFTLSAT LLRHQRTHTG ERPYKCPECG ENSTTRP00000012469/1-923 STLIKHQRTH LREDPFKCPV CGKTFTLSAT LLRHQRTHTG ERPYKCPECG ENSBTAP00000037160/1-868 STLIKHQRTH LREDPFKCPV CGKTFTLSAT LLRHQRTHTG ERPYKCPECG bmy_00739T0/1-899 STLIKHQRTH LREDPFKCPV CGKTFTLSAT LLRHQRTHTG ERPYKCPECG 501 550 BACU011942/1-905 KSFSVSSNLI NHQRIHRGER PYICADCGKS FIMSSTLIRH QRIHTGEKPY ENSTTRP00000012469/1-923 KSFSVSSNLI NHQRIHRGER PYICADCGKS FIMSSTLIRH QRIHTGEKPY ENSBTAP00000037160/1-868 KSFSVSSNLI NHQRIHRGER PYICADCGKS FIMSSTLIRH QRIHTGEKPY bmy_00739T0/1-899 KSFSVSSNLI NHQRIHRGER PYICADCGKS FIMSSTLIRH QRIHTGEKPY 551 600 BACU011942/1-905 KCSDCGKSFI RSSHLIQHRR THTGEKPYKC PECGKSFSQS SNLITHVRTH ENSTTRP00000012469/1-923 KCSDCGKSFI RSSHLIQHRR THTGEKPYKC PECGKSFSQS SNLITHVRTH ENSBTAP00000037160/1-868 KCSDCGKSFI RSSHLIQHRR THTGEKPYKC PECGKSFSQS SNLITHVRTH bmy_00739T0/1-899 KCSDCGKSFI RSSHLIQHRR THTGEKPYKC PECGKSFSQS SNLITHVRTH 601 650 BACU011942/1-905 MDENLFVCSD CGKAFLEAHE LEQHRVIHER GKTPARRAQG DSLLGLGDPA ENSTTRP00000012469/1-923 MDENLFVCSD CGKAFLEAHE LEQHRVIHER GKTPARRAQG DSLLGLGDPA ENSBTAP00000037160/1-868 MDENLFVCSD CGKAFLEAHE LEQHRVIHER GKTPARRAQG DGLLGLGDPA bmy_00739T0/1-899 MDENLFVCSD CGKAFLEAHE LEQHRVIHER GKTPARRAQG DSLLGLGDPA 651 700 BACU011942/1-905 LLTPPPGAKP HKCLVCGKGF NDEGIFMQHQ RIHIGENPYK NSDGLPAHPA ENSTTRP00000012469/1-923 LLTPPPGAKP HKCLVCGKGF NDEGIFMQHQ RIHIGENPYK NSDGLPAHSA ENSBTAP00000037160/1-868 LLTPPPGAKP HKCLVCGKGF NDEGIFMQHQ RIHIGENPYK NSDGLPAHPA bmy_00739T0/1-899 LLTPPPGAKP HKCLVCGKGF NDEGIFMQHQ RIHIGENPYK NSDGLPAHPA 701 750 BACU011942/1-905 PKPPQFRPPR LPFGGNSYPG AAEGRADPPG QPFKMPDGQE SFSQRLGLLS ENSTTRP00000012469/1-923 PKPPQFRPPR LPFGGNSYPG AAEGRADPPG QPFKMPDGQE SFSQRLGLLS ENSBTAP00000037160/1-868 PKPPQFRSPR LPFGGNSFPG AAEGRADPPG QPFKMPDGQE SFSHRLGLPS bmy_00739T0/1-899 PKPPQFRPPR LPFGGNSYPG AAEGRADPPG QPFKMPDGQE SFSQRLGLLS 751 800 BACU011942/1-905 SKSYICSHCG ESFLDRAVLL QHQLTHGNEK PFLFPDYRIG LGEGAGPSPF ENSTTRP00000012469/1-923 SKSYICSHCG ESFLDRAVLL QHQLTHGNEK PFLFPDYRIG LGEGAGPSPF ENSBTAP00000037160/1-868 SKSYICSHCG ESFLDRSVLL QHQVTHGNEK PYLFPDYRIG LGEGAGPSPF bmy_00739T0/1-899 SKSYICSHCG ESFLDRAVLL QHQLTHGNEK PFLFPDYRIG LGEGAGPSPF 801 850 BACU011942/1-905 LSGKPFKCPE CKKSFGLSSE LLLHQKVHAG GKPQKSPELG KSSSVLLEHL ENSTTRP00000012469/1-923 LSGKPFKCPE CKKSFGLSSE LLLHQKVHAG GKPQKSPELG KSSSVLLEHL ENSBTAP00000037160/1-868 LSGKPFKCPE CKKSFALSSE LLLHQKVHAG GKAQKSPELG KSSSVLLEHL bmy_00739T0/1-899 LSGKPFKCPE CKKSFGLSSE LLLHQKVHAG GKPQKSPELG KSSSVLLEHL 851 900 BACU011942/1-905 RSPLGARPYS CSDCGASFLD RLALIRHQET HSQEKSPKPE DPLPEPGTLS ENSTTRP00000012469/1-923 RSPLGARPYS CSDCGASFLD RLALIRHQET HTQEKSPKPE DPHPEPATLS ENSBTAP00000037160/1-868 RSPLGARPYS CSDCGASFLD RLALIRHQET HTQEKSPIPE DPLPEPATLS bmy_00739T0/1-899 RSPLGARPYS CSDCGASFLD RLALIRHQET HSQEKSPKPE DPLPEPGTLS 901 950 BACU011942/1-905 TNQESEEEAP VPTESSSHGE GGSPKTLLEE KPYLCPECGD GFTEVAALLL ENSTTRP00000012469/1-923 TGQENEEEAP IPTESSSHGE GGSPKTLLEE KPYLCPECGD GFTEVAALLL ENSBTAP00000037160/1-868 TSQEGEGEAP APTESSSHEE GGSPKTSLEE KPYLCPECGD GFTEVSALLL bmy_00739T0/1-899 TSQESEEEAP VPTESSSHGE GGSPKTLLEE KPYLCPECGD GFTEVAALLL 951 1000 BACU011942/1-905 HRSCHPGVTL ENSTTRP00000012469/1-923 HRSCHPGVTL ENSBTAP00000037160/1-868 HRSCHPGVTL bmy_00739T0/1-899 HRSCHPGVTL