KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:22 2014 Check: 00 .. Name: ENSP00000311447/1-390 Len: 391 Check: 7810 Weight: 1.00 Name: bmy_00771T0/1-329 Len: 391 Check: 4534 Weight: 1.00 Name: BACU011914/1-281 Len: 391 Check: 5951 Weight: 1.00 Name: ENSTTRP00000005179/1-358 Len: 391 Check: 5140 Weight: 1.00 Name: ENSBTAP00000037186/1-276 Len: 391 Check: 3478 Weight: 1.00 // 1 50 ENSP00000311447/1-390 MKEGRGSFSV ERGPRKERET AQSGMWKGNS PAGSQGAAME GTGGELGGQG bmy_00771T0/1-329 ---------- ---------- ----MWKGNS PGCNQGAAME GTGGELGGQG BACU011914/1-281 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005179/1-358 ---------- ---------- -----LTGEA GNERENCPKE RRGGKRKREX ENSBTAP00000037186/1-276 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000311447/1-390 NWGPEDAPGL LARASLIMLP -WPLPLASSA LTLLFGALTS LFLWYCYRLG bmy_00771T0/1-329 NWGLEDAPGL LARASLPIMP AWPLPLASSA LTLLLGALTS LFLWYCYRLG BACU011914/1-281 ---------- --------MP AWPLPLASSA LTLLLGVLTS LFLWYCYRLG ENSTTRP00000005179/1-358 XXXXXXXXXX X-------XX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000037186/1-276 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000311447/1-390 SQDMQALGAG SRAGGVRGGP VGCSEAGGPS PGGPGDPGEG PRTEGLVSRR bmy_00771T0/1-329 SQDMQALGAG RRAGAVSGRP GGCSEAGRPS PRSSGESVEG PKTEGLVSRR BACU011914/1-281 SQDMQALGA- ---GAVSGRP GGCSEAGRPS PRSSGESVEG PRTEGLVSRR ENSTTRP00000005179/1-358 XXXXXXXGAG SRSGAVSGRP GGCSEAGRPS PRSSGESVEG PRTEGLVSRR ENSBTAP00000037186/1-276 ---------- -----VGGRP GGCSEAGRPS PGRSGESGEG PRTEGLMSRR 151 200 ENSP00000311447/1-390 LRAYARRYSW AGMGRVRRAA QGGPGPGRGP GVLGIQRPGL LFLPDLPSAP bmy_00771T0/1-329 LRAYARRYSW AGMGRVRRAA QGSPGPGGGP GVLGIQRPGL LFLPDLPSAP BACU011914/1-281 LRAYARRYSW AGMGRVRRAA QGSPGPRGGP GVLGIQRPGL LFLPDLPSAP ENSTTRP00000005179/1-358 LRAYARRYSW AGMGRVRRAA QGSPGPGGGP GVLGIQRPGL LFLPDLPSAP ENSBTAP00000037186/1-276 LRAYARRYSW AGMGRVRRAA QGGPSPGGGP GVLGIQRPGL LFLPDLPSAP 201 250 ENSP00000311447/1-390 FVPRDAQRHD VELLESSFPA ILRDFGAVSW DFSGTTPPPR GWSPPLAPGC bmy_00771T0/1-329 FVPRDAQRHD VELLESSFPA ILRDFGAVSW DFSGTTPLPR GWSPPLAPGC BACU011914/1-281 FVPRDAQRHD VELLESSFPA ILRDFGAVSW DFSGTTPLPR GWSPPLAPGC ENSTTRP00000005179/1-358 FVPRDAQRHD VELLESSFPA ILRDFGAVSW DFSGTTPLPR GWSPPLAPGC ENSBTAP00000037186/1-276 FVPREAQRHD VELLESSFPA ILRDFGAVSW DFSGTTPPPR GWSPPLAPGC 251 300 ENSP00000311447/1-390 YQLLLYQAGR CQPSNCRRCP GAYRALRGLR SFMSANTFGN AGFSVLLPGA bmy_00771T0/1-329 YQLLLYQAGR CQPSNCRRCP GAYRALRGLR SFMSANAFGN AGFSVLLPGA BACU011914/1-281 YQLLLYQAGR CQPSNCRRCP GAYRALRGLR SFMSANTFGN AGFSVLLPGA ENSTTRP00000005179/1-358 YQLLLYQAGR CQPSNCRRCP GAYRALRGLR SFMSANTFGN AGFSVLLPGA ENSBTAP00000037186/1-276 YQLLLYQAGR CQPSNCRRCP GAYRALRGLR SFMSANTFGN AGFSVLLPGA 301 350 ENSP00000311447/1-390 RLEGRCGPTN ARVRCHLGLK IPPGCELVVG GEPQCWAEGH CLLVDDSFLH bmy_00771T0/1-329 RLEGRCGPTN ARVRCHL--- ---------- ---------- ---------- BACU011914/1-281 RLEGCCGPTN ARVRCHL--- ---------- ---------- ---------- ENSTTRP00000005179/1-358 RLEGRCGPTN ARVRCHLGLK IPPGCELVVG GEPQCWAEGH CLLVDDSFLH ENSBTAP00000037186/1-276 RLEGRCGPTN ARVRCHLGLK IPPGCELVVG GEPQCWAEGH CLLVDDSFLY 351 400 ENSP00000311447/1-390 TVAHNGSPED GPRVVFIVDL WHPNVAGAER QALDFVFAPD P bmy_00771T0/1-329 -----GSPEE GPRVVFIVDL WHPNVAGAER QALDFVFAPD P BACU011914/1-281 -----GSPED GPRVVFIVDL WHPNVAGAER QALDFVFAPD P ENSTTRP00000005179/1-358 TVAHNGSPED GPRVVFIVDL WHPNVW-AER QALDFVFAPD P ENSBTAP00000037186/1-276 TVAHNGSPED GPRVVFIVDL WHPNVAGAER QALDFVFAPD P