KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:25 2014 Check: 00 .. Name: ENSP00000366690/1-591 Len: 618 Check: 5087 Weight: 1.00 Name: bmy_07583T0/1-468 Len: 618 Check: 1333 Weight: 1.00 Name: ENSBTAP00000037249/1-583 Len: 618 Check: 6028 Weight: 1.00 Name: ENSTTRP00000002576/1-510 Len: 618 Check: 401 Weight: 1.00 Name: BACU001468/1-378 Len: 618 Check: 4021 Weight: 1.00 // 1 50 ENSP00000366690/1-591 MSLLTNYEGL RHQIERLVRE NEELKKLVRL IRENHELKSA IKTQAGGLGI bmy_07583T0/1-468 MSLLTNYEGL RHQIERLVRE NEELKKLVRL IRENHELKSA IKMQAGGLGI ENSBTAP00000037249/1-583 MSLLTNYEGL RHQIERLVRE NEELKKLVRL IRENYELKSA IKTQAGSLGI ENSTTRP00000002576/1-510 ---------- ---------- ---------- ---------- ---------- BACU001468/1-378 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000366690/1-591 SGFTSGLGEA TAGLSSRQNN G-VFLPPSPA VANERVLEEV GIMALAPLAE bmy_07583T0/1-468 SGFSSRLGEA ATGLPQHQG- --VFLPPSPA AANEPVLEEV GIVALAPLAD ENSBTAP00000037249/1-583 SGFSSGLSEA AASASPHQVN NSVFLPPSPA AANEPILEEV GIVALAPLAD ENSTTRP00000002576/1-510 ---------- ---------- --VFPPPAPA AANEPVLEE- GMAALVPLAD BACU001468/1-378 ---------M ASVAAVEQTT KRVFLPPSPA AANEPVLEEV GIVALAPLAD 101 150 ENSP00000366690/1-591 MLTSLQPSAT PGSLMSPLTG TLSTLLSGPA PTSQSSPLTS FLT------- bmy_07583T0/1-468 VLNSPQPSPA AGPVVSALMG PLNTLLPGLE PISQSSPLTS LLTGPLSSHL ENSBTAP00000037249/1-583 VLNSPQPSPV AGPIVSPLAG PLNTLLPGPG PTSQSSPLTS LLS------- ENSTTRP00000002576/1-510 TLDSPQPSPA AGPVVSARMG PLNTLLPGLG PISQSSPLSS LLT------- BACU001468/1-378 VLNSPQPSPA AGPVVSALMG PLHTLLP-PG PTSQSGPLTS LLTGPPSSQL 151 200 ENSP00000366690/1-591 -SPIAGPLTG TLASSLGLPS TGTLTPSSLV AGPVAMS--- ---------- bmy_07583T0/1-468 ASPVAVPLAG TPASSLGLPS TGPLNPSSHL ASPVAVP--- ---------- ENSBTAP00000037249/1-583 -SHLASPLGG TPTSSLGLPS TGPLTPGSPL VGPLAVS--- ---------- ENSTTRP00000002576/1-510 -SPVAVPLAD TPASSLGLPS TGPLTPSSPL TGPRAVP--- ---------- BACU001468/1-378 ASPVAVPPAG TPASSLGLPS TGPLNPSSHL ASPVAVPPAG TPASSLGLPS 201 250 ENSP00000366690/1-591 -----QSSPL IAPVMGTVAV SLSSPLLSST ATPPGVSQNL LANPMSNLVL bmy_07583T0/1-468 ---------L AGTLAXWPPE SKQPPGQPRG SAPGGHTGQL PGPALD---- ENSBTAP00000037249/1-583 -----QNGPL MPPMTGSGVL SLNSPLLTST AAPLGVSQNV LANPMNNLVL ENSTTRP00000002576/1-510 -----QSSPL MDAVTGSVAL SLSSPLLTST AAPLGVSQNL PANPVSSLVL BACU001468/1-378 TGSLAPSSPL TAPITGSVVL SLSSPLLPST AAPLGVSQNL PANPMSNLVL 251 300 ENSP00000366690/1-591 PEAPRLRLAE PLRGGPTGPQ SPACVVPTAT TKVPLSTEPP QSTQDPEPLS bmy_07583T0/1-468 ------WLPD SKQP-PYGPY NRFGG----- ---PLSEQPP APLHGCSP-- ENSBTAP00000037249/1-583 SEAPRVRLAE PLRGYPPGPH PSADRGPSAT SKVSLPTEHP QPTHEPEPLS ENSTTRP00000002576/1-510 LEAPRVWLAE PLQGCPSGPH PSAGGGPAAT AEAPPSAEHP QPAQEPEPLS BACU001468/1-378 SEAPRVWLAE PLQGCPSGSH PSAGGGPAAT AE-------- ---------- 301 350 ENSP00000366690/1-591 MAFAGAPLQT STPIGAMGTP APKTAFSFNT SDTQAQPSAA QEQVVPASVP bmy_07583T0/1-468 ---------- ---------- ---RCFSEPS GQSHEQSGAV RG-------- ENSBTAP00000037249/1-583 MTFVGAPIQT STPVGALGTP GPVIAFSYGT SDAQTQPGGP QGQVIPASVP ENSTTRP00000002576/1-510 MTSVGAPMQT STPVSPMGTP SPATAFSYGT PDARTQPGGP QGQAVSASVP BACU001468/1-378 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000366690/1-591 TSPTTSPTVT VLASAPALAP QVATSYTPSS TTHIAQGAPH PPSRMHNSPT bmy_07583T0/1-468 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000037249/1-583 VS--TASNMA ILTSAPTPTP TVTTSYTPSS T-------PH PSARTHHSPS ENSTTRP00000002576/1-510 AS-ATSYNIT ILASALTPAP QAATSYRPSS T-------PH PFARTHRSPT BACU001468/1-378 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000366690/1-591 QNLPVPHCPP HNAHSPPRTS SSPASVNDSR GPRTTEPSTK SMMEVERKLA bmy_07583T0/1-468 ---------- ---------- ---PKVNDTR GPRVAEPSRK GILELERKLA ENSBTAP00000037249/1-583 RPSPTPHSPP RNPRSPPRTS SSPASVTDAR GPRGPEQSRK SILELERKLA ENSTTRP00000002576/1-510 RLSPTLHSPA HNPHSPPRAS SSPASVNDTR GPRVAEPSRK SNLQLERKLA BACU001468/1-378 ---------- ---------- ---------- ---------- ---------- 451 500 ENSP00000366690/1-591 HRKTSKFPEN PRESKQLAWE RLVGEIAFQL DRRILSSIFP ERVRLYGFTV bmy_07583T0/1-468 PRKSGKLPDS SRESKQLAWE RLVGEIAFQL DRRILSSIFP ERVRLYGFTV ENSBTAP00000037249/1-583 HRKSSKFPDS SRESKQLAWE RLVGEIAFQL DRRILSSIFP ERVRLYGFTV ENSTTRP00000002576/1-510 HRKTGKFPDS SRQSKQLAWE RLVGEIAFQL DRRILSSIFP ERVRLYGFTV BACU001468/1-378 ---------- --ESKQLAWE RLVGEIAFQL DRRILSSIFP ERVRLYGFTV 501 550 ENSP00000366690/1-591 SNIPEKIIQA SLNPSDHKLD EKLCQRLTQR YVSVMNRLQS LGYNGRVHPA bmy_07583T0/1-468 SNIPEKIIQA SLKPSDHRLD EELCQTLTQR YTSIMNRLQS LGYNGRVHPA ENSBTAP00000037249/1-583 SNIPEKIIQA SLNPSDHKLD EELCQTLTQR YVSIMNRLQS LGYNGRVHPA ENSTTRP00000002576/1-510 SNIPEKIIQA SLNPSDHKLD EELCQTLSQR YASIMNRLQS LGYDGRVHPA BACU001468/1-378 SNIPEKIIQA SLKPSDHKLD EELCQTLTQR YTSIMNRLQS LGYNGRVHPA 551 600 ENSP00000366690/1-591 LTEQLVNAYG ILRERPELAA SEGGPYTVDF LQRVVVETVH PGMLADALLL bmy_07583T0/1-468 LTEQLVNAYG ILRERPELAA SEGGSYTVDF LQRVLVETVH PSVLTDALLL ENSBTAP00000037249/1-583 LTEQLVNAYG ILRERPELAA SEGGSYTVDF LQRVLVETVH PSMLTDALLL ENSTTRP00000002576/1-510 LTEQLVNAYG I-RERPELAA SKGVSYTVDF LQRVLVETVH PSMLADALLL BACU001468/1-378 LTEQLVNAYG ILRERPELAA SEGGSYTVDF LQRVLVETVH PSMLTDALLL 601 650 ENSP00000366690/1-591 LSCLSQLAHD DGKPMFIW bmy_07583T0/1-468 LSCLSQLARD DGKPMFIW ENSBTAP00000037249/1-583 LSCLSQLAHD DGKPMFIW ENSTTRP00000002576/1-510 LSCLSQLAHD DGKPMFIW BACU001468/1-378 LSCLSQLAHD DGKPMFIW