KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:29 2014 Check: 00 .. Name: ENSTTRP00000013815/1-431 Len: 849 Check: 7449 Weight: 1.00 Name: BACU012950/1-428 Len: 849 Check: 4731 Weight: 1.00 Name: bmy_06511T0/1-393 Len: 849 Check: 510 Weight: 1.00 Name: ENSP00000456480/1-813 Len: 849 Check: 8341 Weight: 1.00 Name: ENSBTAP00000037293/1-775 Len: 849 Check: 52 Weight: 1.00 // 1 50 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 ---------- ---------- ---------- ---------- ---------- bmy_06511T0/1-393 --------MK RQFLLERLLD AVKQCQIRFG GRKEIASDSD SRVTCLCAQF ENSP00000456480/1-813 MSGSQNND-K RQFLLERLLD AVKQCQIRFG GRKEIASDSD SRVTCLCAQF ENSBTAP00000037293/1-775 MSGTQNNDMK RQFLLERLLD AVKQCQIRFG GRKEIASDSD SRVTCLCAQF 51 100 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 ---------- ---------- ---------- ---------- -MHAPQRGPT bmy_06511T0/1-393 EAVLQHGLKR SRGLALTAAA IKQAAGFASK TETATSEELV WNRPPGSGQL ENSP00000456480/1-813 EAVLQHGLKR SRGLALTAAA IKQAAGFASK T--------- ---------- ENSBTAP00000037293/1-775 EAVLQHGLKR SRGLALTAAA IKQAAGFASK T--------- ---------- 101 150 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 V--------- ---SAEPVFW FYVKEVLSKH ELQRFYALHH IASDVGRGRA bmy_06511T0/1-393 LGMAEATLAL ESDSEEPVFW FYVKEVLSKH ELQRFYALHH IASDVGRGRA ENSP00000456480/1-813 ---------- ---ETEPVFW YYVKEVLNKH ELQRFYSLRH IASDVGRGRA ENSBTAP00000037293/1-775 ---------- ---ETEPVFW FYVKEVLSKH ELQRFHALRH IASDVGRGRA 151 200 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 WLRCALNEHS LERYLHMLLA DHSRLSTFYE DWAFVMDEER SSMLPTMAAG bmy_06511T0/1-393 WLRCALNEHS LERYLHMLLA DHSRLSV--- ----TVEQQT HQAXPFLGAG ENSP00000456480/1-813 WLRCALNEHS LERYLHMLLA DRCRLSTFYE DWSFVMDEER SSMLPTMAAG ENSBTAP00000037293/1-775 WLRCALNENS LERYLHMLLA DRGRLSTFYE DWAFVMDEER SSMLPTMAAG 201 250 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 LNSILFAINI DNKDLNGQSK FAPTVSDLLK ESTQNVTSLL KESTQGVSSL bmy_06511T0/1-393 LNSILFAINI DNKDLNGQSK FAPTVSDLLK ESTQNVTSLL KESTQGVSSL ENSP00000456480/1-813 LNSILFAINI DNKDLNGQSK FAPTVSDLLK ESTQNVTSLL KESTQGVSSL ENSBTAP00000037293/1-775 LNSILFAINI DNKDLNGQSK FAPTVSDLLK ESTQNVTSLL KESTQGVSSL 251 300 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 FREITASSAV SILIRPEQET DPLPVVSKHV SADAKCKRER KKKKKVTNII bmy_06511T0/1-393 FREITASSAV SILIRPEQET DPLPVVSKHV SADAKCKRER KKKKKVTNII ENSP00000456480/1-813 FREITASSAV SILIKPEQET DPLPVVSRNV SADAKCKKER KKKKKVTNII ENSBTAP00000037293/1-775 FREITASSAV SILSRAEQET DPLPVVSKHV SADAKCKRER KKKKKVTNII 301 350 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 SFDDEEDEQS SGDVSKKIPG AGESSEENSD RSSVSIMTAF ESPFGPNSNG bmy_06511T0/1-393 SFDDEEDEQS SGDVSKKIPG AGESSEENSD RSSVSIMTAF ESPFGPNSNG ENSP00000456480/1-813 SFDDEEDEQN SGDVFKKTPG AGESSEDNSD RSSVNIMSAF ESPFGPNSNG ENSBTAP00000037293/1-775 SFDDEEDEQS SGDVFKKIPG AGESSEENSD RSSINIMSAF ESPFGPNSNG 351 400 ENSTTRP00000013815/1-431 ---------- ---------- ---------- ---------- ---------- BACU012950/1-428 SQSSNSWKID SLSLNGEFGY QKLDVKSIDD EDVDENEDDV YGSTPGKKCP bmy_06511T0/1-393 SQSSNSWKID SLSLNGEFGY QKLDVKSIDD EDVDENEDDV YGSTPGKKCP ENSP00000456480/1-813 SQSSNSWKID SLSLNGEFGY QKLDVKSIDD EDVDENEDDV YGNSSGRKHR ENSBTAP00000037293/1-775 SQGSNSWKID SLSLNGEFGY QKLDVKSIDD EDADENEDDV CGSMPGRKRP 401 450 ENSTTRP00000013815/1-431 ---------- --------MH SWAPLHVLHG DADVLFPVSG VGSYGPADTP BACU012950/1-428 GHSESLEKPL DGGACLSRMH SWAPLHVLHG DTDVLFPVGG VGAYGPADTH bmy_06511T0/1-393 GHSESPEK-- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 GHSESPEKPL EGNTCLSQMH SWAPLKVLHN DSDILFPVSG VGSYSPADAP ENSBTAP00000037293/1-775 GHSESPEKPL DAGTCLSQMH GWAPLQVLHG HAEVLFPVSG VGSYGPADAP 451 500 ENSTTRP00000013815/1-431 LGSLENGTGP DDHVLPEPGP RYSVEASPPG QGSPLSSLLP SASVPESMTI BACU012950/1-428 LGSLENGTGP DDHVLSEPGP RYSVEASPPG QGSPLSSLLP SASVPESMTI bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 LGSLENGTGP EDHVLPDPGL RYSVEASSPG HGSPLSSLLP SASVPESMTI ENSBTAP00000037293/1-775 LGSLENGTGP EDHILPEPGP RYSVEASPPG QESPLSSLLP SASVPESMTV 501 550 ENSTTRP00000013815/1-431 SELRQAIVAM MTRKDELEEE NRSLRNLLDG EMEHSAVLRQ EVDTLKRKVA BACU012950/1-428 KHMTFATLGV LFIVDGLGNF TRG------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 SELRQATVAM MNRKDELEEE NRSLRNLLDG EMEHSAALRQ EVDTLKRKVA ENSBTAP00000037293/1-775 SDLRQAIVAM MNRKDELEEE NRSLRNLLDG EMEHSAALRQ EVDTLKRKVA 551 600 ENSTTRP00000013815/1-431 EQEERHVTKI QALARENEVL KVQLKKYVGA VQMLKREGQT AEVVPNLWNV BACU012950/1-428 ---------- ---------- ---------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 EQEERQGMKV QALARENEVL KVQLKKYVGA VQMLKREGQT AE-VPNLWSV ENSBTAP00000037293/1-775 EQEERHVTKV QALARENEVL KVQLKKYVGA VQMLKREGQT AEVVPNLWNI 601 650 ENSTTRP00000013815/1-431 DGEVTVTDQK PGEVAEELAS SYERKLIEVA EMHGELIEFN ERLHRALVAK BACU012950/1-428 ---------- ---------- ---------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 DGEVTVAEQK PGEIAEELAS SYERKLIEVA EMHGELIEFN ERLHRALVAK ENSBTAP00000037293/1-775 DGEVTVPEQK PGEVAEELAS SYERKLIEVA EMHGELIEFN ERLHRALVAK 651 700 ENSTTRP00000013815/1-431 EALVSQMRQE LIDLRGPVPG DLSQTSEDQS LSDFETSNRA LINVWIPSVF BACU012950/1-428 ---------- ---------- ---------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 EALVSQMRQE LIDLRGPVPG DLSQTSEDQS LSDFEISNRA LINVWIPSVF ENSBTAP00000037293/1-775 EALVSQMRQE LIDLRGPVPG DLSQTSEDQS LSDFEISNRA LINVWIPSVF 701 750 ENSTTRP00000013815/1-431 LRGKAANAFH VYQXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU012950/1-428 ---------- -YHLHIYLK- ---------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 LRGKAANAFH VYQVYIRIKD DEWNIYRRYT EFRSLHHKLQ NKYPQVRAYN ENSBTAP00000037293/1-775 LRGKAANAFH VYQVYIRIKD DEWNVYRRYA EFRTLHHKLQ NKYPQVRAFN 751 800 ENSTTRP00000013815/1-431 XXXXXXXXXX DAKFVEERRK QLQNYLRSVM NKVIQVVPEF AASPQKETLV BACU012950/1-428 ---------- ---------- ---------- ---------- ---------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- ---------- ENSP00000456480/1-813 FPPKKAIGNK DAKFVEERRK QLQNYLRSVM NKVIQMVPEF AASPKKETLI ENSBTAP00000037293/1-775 FPPKKAIGNK DAKFVEERRK QLQTYLRSVM NKVIQAVPEF TASPQKETLT 801 850 ENSTTRP00000013815/1-431 QLMPFFIDVT PPGEPLTKNS RPKVASRFPK LSRGHPRETR NVEPQSGDL BACU012950/1-428 ---------- ---------- ---------- ---------- --------- bmy_06511T0/1-393 ---------- ---------- ---------- ---------- --------- ENSP00000456480/1-813 QLMPFFVDIT PPGEPV--NS RPKAASRFPK LSRGQPRETR NVEPQSGDL ENSBTAP00000037293/1-775 QLMPFFL--- ---------- ---------- ---------- ---------