KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:29 2014 Check: 00 .. Name: ENSBTAP00000037316/1-340 Len: 340 Check: 5262 Weight: 1.00 Name: ENSTTRP00000001556/1-330 Len: 340 Check: 7402 Weight: 1.00 Name: bmy_14652T0/1-191 Len: 340 Check: 3873 Weight: 1.00 Name: BACU018513/1-308 Len: 340 Check: 1540 Weight: 1.00 // 1 50 ENSBTAP00000037316/1-340 MAQEERADAA RLLRGFERRF LAARALRSFP WQSLEEKLRD SSGSELLLDI ENSTTRP00000001556/1-330 MAPEDSAEAA PLLRSFERRF LAARALSSFP WQSLEEKLRD SSGSELLLDI bmy_14652T0/1-191 ---------- ---------- ---------- ---------- ---------- BACU018513/1-308 ---------- ---------- ---------- --SLEEKLRD SSGSGLLLDI 51 100 ENSBTAP00000037316/1-340 LQKTVKHPLC VKHPPSVKYS RSFLSELIRK HEAVHTEPLD ELYQALAEVL ENSTTRP00000001556/1-330 LQKTVKHPLC MKHPPSVKYA WSFLSELIRK HEAIHTEPLD ELYEALAEVL bmy_14652T0/1-191 ---------- ---------- ---------- ---------- ---------- BACU018513/1-308 LQKTVKHPLC VKHPPSVKYA WSFLSELIRK HEAIHTEPLD ELYEALAEIL 101 150 ENSBTAP00000037316/1-340 TAEDPTHCHR SYLLPSGDSV TLCESTAIVS HGTTGLVTWN AALYLAEWAV ENSTTRP00000001556/1-330 TAEEPTQCHR SYLLPSGDSI TLCESTAIIS HGTTGLVTWN AALYLAEWAM bmy_14652T0/1-191 ---------- ---------- ---------- ---------- ---------M BACU018513/1-308 TAEEPTRCHR SYLLPSGDSV TLSESTAIIS HGTTGLVTWN AALYLAEWAM 151 200 ENSBTAP00000037316/1-340 ENPAVFAHRM VLELGSGAGL TGLAICKTCR PRAYIFSDCH SHVLEQLRGN ENSTTRP00000001556/1-330 ENPAGFAHRT VLELGSGAGL TGLAICKMCR PRAYVFSDCH SHVLEQLQGN bmy_14652T0/1-191 ENPAGFAHRT VLELGSGAGL TGLAICKMCR PRAYVFSDCH SHVLEQLQGN BACU018513/1-308 ENPAGFAHRT VLELGSGAGL TGLAICKMCR PRAYVFSDCH SHVLEQLQGN 201 250 ENSBTAP00000037316/1-340 VLLNGFSLEP SIDTWAQHPG PHTPEAERPW VTVARLDWDT VTAPQLAAFQ ENSTTRP00000001556/1-330 ILLNGLSLEP NV-------- --TADAESPR VMVARVDWDV VTVPQLAAFQ bmy_14652T0/1-191 VLLNGLSLEP NVTALAQHPG HDTADAESPR VTVARVDWDV VTAPQLAAFQ BACU018513/1-308 VLLNGLSLEP NVTALAQHPG HDTADAESPR VTVAQVDWDV VTAPQLAAFQ 251 300 ENSBTAP00000037316/1-340 PDVVLAADVL YCPETVLSLV GVLRKLSTCR KDQRAPDAYI AFTIRNPETC ENSTTRP00000001556/1-330 PDIVIAADVL YCPETVLSLV GVLQKLSACQ KDQRVPDAYV AFTIRNPETC bmy_14652T0/1-191 PDIVIAADVL YCPETVLSLV GVLQKLSACQ KDQRAPDAYV AFTIRNPETC BACU018513/1-308 PDIVIAADVL YCPETVLSLV GVLQKLSACQ KDQRAPDAYV AFTIRNPETC 301 350 ENSBTAP00000037316/1-340 QLFTTELGQA GIPWEEVPCH DQKLFPYEEH SEMAILKLTL ENSTTRP00000001556/1-330 QLFTTELGRA GIPWEEVPRH DQKLFPYEEH SEMAILKLML bmy_14652T0/1-191 QLFTTELGRA GIPWEEVPRH DQKLFPYEEH SEMAILKLML BACU018513/1-308 QLFTRELGRA GIPWEEVPRH DQKLFPYEEH SEMAILKLML