KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:37 2014 Check: 00 .. Name: ENSTTRP00000010838/1-981 Len: 1009 Check: 2959 Weight: 1.00 Name: bmy_15410T0/1-932 Len: 1009 Check: 3436 Weight: 1.00 Name: ENSP00000280377/1-981 Len: 1009 Check: 2176 Weight: 1.00 Name: ENSBTAP00000037402/1-952 Len: 1009 Check: 8401 Weight: 1.00 Name: BACU008176/1-1009 Len: 1009 Check: 2136 Weight: 1.00 // 1 50 ENSTTRP00000010838/1-981 MAEGGAADLD IQRSDIATLL KTPLRKGDTW ---------- ---------- bmy_15410T0/1-932 MAEGGAADLD IQRSDIATLL KTSLRKGDTW ---------- ---------- ENSP00000280377/1-981 MAEGGAADLD TQRSDIATLL KTSLRKGDTW ---------- ---------- ENSBTAP00000037402/1-952 MAEGGAADLD IQRSDIATLL KTSLRKGDTW ---------- ---------- BACU008176/1-1009 MAEGGAADLD IQRSDIATLL KTSLRKGDTW KIVIQENGLA EVAIEKTSFV 51 100 ENSTTRP00000010838/1-981 --------YL VDSRWFKQWK KYVGFDSWDK YQMGDQNVYP GPIDNSGLLK bmy_15410T0/1-932 --------YL VDSRWFKQWK KYVGFDSWDK YQMGDQNVYP GPIDNSGLLK ENSP00000280377/1-981 --------YL VDSRWFKQWK KYVGFDSWDK YQMGDQNVYP GPIDNSGLLK ENSBTAP00000037402/1-952 --------YL VDSRWFKQWK KYVGFDSWDK YQMGDQNVYP GPIDNSGLLR BACU008176/1-1009 KEVKGSHKYL VDSRWFKQWK KYVGFDSWDK YQMGDQNVYP GPIDNSGLLK 101 150 ENSTTRP00000010838/1-981 DGDAQSLKEH LIDELDYILL PTEGWNKLVS WYTLMEGQEP IARKVVEQGM bmy_15410T0/1-932 DGDAQSLKEH LIDELDYILL PTEGWNKLVS WYTLMEGQEP IARKVVEQGM ENSP00000280377/1-981 DGDAQSLKEH LIDELDYILL PTEGWNKLVS WYTLMEGQEP IARKVVEQGM ENSBTAP00000037402/1-952 DGDAQSLKEH LIDELDYILL PTEGWNKLVS WYTLMEGQEP IARKVVEQGM BACU008176/1-1009 DGDAQSLKEH LIDELDYILL PTEGWNKLVS WYTLMEGQEP IARKVVEQGM 151 200 ENSTTRP00000010838/1-981 FVKHCKVEVY LTELKLCENG NMNNVVTRRF SKADTIDTIE KEIRKIFNIP bmy_15410T0/1-932 FVKHCKVEVY LTELKLCENG NMNNVVTRRF SKADTIDTIE KEIRKIFNIP ENSP00000280377/1-981 FVKHCKVEVY LTELKLCENG NMNNVVTRRF SKADTIDTIE KEIRKIFSIP ENSBTAP00000037402/1-952 FVKHCKVEVY LTELKLCENG NMNNVVTRRF SKADTIDTIE KEIRKIFNIP BACU008176/1-1009 FVKHCKVEVY LTELKLCENG NMNNVVTRRF SKADTIDTIE KEIRKIFNIP 201 250 ENSTTRP00000010838/1-981 DEKETRLXXX XXXXXXXXXX XXXXXXXXXX XXXXXVLVIE QKNEDGTWPR bmy_15410T0/1-932 DEKETRLWNK YMSNTFEPLN KPDSTIQDAG LYQGQVLVIE QKNEDGTWPR ENSP00000280377/1-981 DEKETRLWNK YMSNTFEPLN KPDSTIQDAG LYQGQVLVIE QKNEDGTWPR ENSBTAP00000037402/1-952 DEKETRLWNK YMSNTFEPLN KPDSTIQDAG LYQGQVLVIE QKNEDGTWPR BACU008176/1-1009 DEKETRLWNK YMSNTFEPLN KPDSTIQDAG LYQGQVLVIE QKNEDGTWPR 251 300 ENSTTRP00000010838/1-981 GPSTPKSPGA SNFSTLPKIS PSSLSNNYNN INNRNVKNSN YCLPSYTAYK bmy_15410T0/1-932 GPSTPKSPGA SNFSTLPKIS PSSLSNNYNN INNRN----- ---------- ENSP00000280377/1-981 GPSTPKSPGA SNFSTLPKIS PSSLSNNYNN MNNRNVKNSN YCLPSYTAYK ENSBTAP00000037402/1-952 GPSTP----- ---------- ---------- ----NVKNSN YCLPSYTAYK BACU008176/1-1009 GPSTPKSPGA SNFSTLPKIS PSSLSNNYNN INNRNVKNSN YCLPSYTAYK 301 350 ENSTTRP00000010838/1-981 NYDYSEPGRN NEQPGLCGLS NLGNTCFMNS AIQCLSNTPP LTEYFLNDKY bmy_15410T0/1-932 -YRFTKIVSI HDHLKIGLLE HLNRKGVVHI ---------- -------QHY ENSP00000280377/1-981 NYDYSEPGRN NEQPGLCGLS NLGNTCFMNS AIQCLSNTPP LTEYFLNDKY ENSBTAP00000037402/1-952 NYDYSEPGRN NEQPGLCGLS NLGNTCFMNS AFQCLSNTPP LTEYFLNDKY BACU008176/1-1009 NYDYSEPGRN NEQPGLCGLS NLGNTCFMNS AIQCLSNTPP LTEYFLNDKY 351 400 ENSTTRP00000010838/1-981 QEELNFDNPL GMRGEIAKSY AELIKQMWSG KFSYVTPRAF KTQVGRFAPQ bmy_15410T0/1-932 KRQLSL---- -FEGDYFDYF --------PG QHFF---SIL QTQVGRFAPQ ENSP00000280377/1-981 QEELNFDNPL GMRGEIAKSY AELIKQMWSG KFSYVTPRAF KTQVGRFAPQ ENSBTAP00000037402/1-952 QEELNFDNPL GMRGEIAKSY AELIKQMWSG KYSYVTPRAF KTQVGRFAPQ BACU008176/1-1009 QEELNFDNPL GMRGEIAKSY AELIKQMWSG KFSYVTPRAF KTQVGRFAPQ 401 450 ENSTTRP00000010838/1-981 FSGYQQQDCQ ELLAFLLDGL HEDLNRIRKK PYIQLKDADG RPDKVVAEEA bmy_15410T0/1-932 FSGYQQQDCQ ELLAFLLDGL HEDLNRIRKK PYIQLKDADG RPDKVVAEEA ENSP00000280377/1-981 FSGYQQQDCQ ELLAFLLDGL HEDLNRIRKK PYIQLKDADG RPDKVVAEEA ENSBTAP00000037402/1-952 FSGYQQQDCQ ELLAFLLDGL HEDLNRIRKK PYIQLKDADG RPDKVVAEEA BACU008176/1-1009 FSGYQQQDCQ ELLAFLLDGL HEDLNRIRKK PYIQLKDADG RPDKVVAEEA 451 500 ENSTTRP00000010838/1-981 WENHLKRNDS IIVDIFHGLF KSTLVCPECA KISVTFDPFC YLTLPLPMKK bmy_15410T0/1-932 WENHLKRNDS IIVDIFHGLF KSTLVCPECA KISVTFDPFC YLTLPLPMKK ENSP00000280377/1-981 WENHLKRNDS IIVDIFHGLF KSTLVCPECA KISVTFDPFC YLTLPLPMKK ENSBTAP00000037402/1-952 WENHLKRNDS IIVDIFHGLF KSTLVCPECA KISVTFDPFC YLTLPLPMKK BACU008176/1-1009 WENHLKRNDS IIVDIFHGLF KSTLVCPECA KISVTFDPFC YLTLPLPMKK 501 550 ENSTTRP00000010838/1-981 ERTLEVYLVR MDPLTKPMQY KVVVPKIGNI LDLCTALSAL SGVPADKMIV bmy_15410T0/1-932 ERTLEVYLVR MDPLTKPMQY KVVVPKIGNI LDLCTALSAL SGVPADKMIV ENSP00000280377/1-981 ERTLEVYLVR MDPLTKPMQY KVVVPKIGNI LDLCTALSAL SGIPADKMIV ENSBTAP00000037402/1-952 ERTLEVYLVR MDPLTKPMQY KVVVPKIGNI LDLCTALSLL SGVPADKMIV BACU008176/1-1009 ERTLEVYLVR MDPLTKPMQY KVVVPKIGNI LDLCTALSAL SGVPADKMIV 551 600 ENSTTRP00000010838/1-981 TDIYNHRFHR IFAMDENLSS IMERDDIYVF EININRTEDT EHVIIPVCLR bmy_15410T0/1-932 TDIYNHRFHR IFAMDENLSS IMERDDIYVF EININRTEDT EHVIIPVCLR ENSP00000280377/1-981 TDIYNHRFHR IFAMDENLSS IMERDDIYVF EININRTEDT EHVIIPVCLR ENSBTAP00000037402/1-952 TDIYNHRFHR IFAMDENLSS IMERDDIYVF EININRTEDT EHVIIPVCLR BACU008176/1-1009 TDIYNHRFHR IFAMDENLSS IMERDDIYVF EININRTEDT EHVIIPVCLR 601 650 ENSTTRP00000010838/1-981 EKFRHSSYTH HTGSSLFGQP FLMAVPRNNT EDKLYNLLLV RMXXXXXXXX bmy_15410T0/1-932 EKFRHSSYTH HTGSSLFGQP FLMAVPRNNT EDKLYNLLLV RMCRYVKIST ENSP00000280377/1-981 EKFRHSSYTH HTGSSLFGQP FLMAVPRNNT EDKLYNLLLL RMCRYVKIST ENSBTAP00000037402/1-952 EKFRHSSYTH HTGSSLFGQP FLMAVPRNNT EDKLYNLLLV RMCRYVKIST BACU008176/1-1009 EKFRHSSYTH HTGSSLFGQP FLMAVPRNNT EDKLYNLLLV RMCRYVKIST 651 700 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15410T0/1-932 DTEETEGSLH CCKDQNINGN GPNGIHEEGS PSEMETDEPD DESSQDQELP ENSP00000280377/1-981 ETEETEGSLH CCKDQNINGN GPNGIHEEGS PSEMETDEPD DESSQDQELP ENSBTAP00000037402/1-952 DTEDTEGSLH CCKDQNINGN GPNGIHEEGS PSEMETDEPD DESSQDQELP BACU008176/1-1009 DTEETEGSLH CCKDQNINGN GPNGIHEEGS PSEMETDEPD DESSQDQELP 701 750 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15410T0/1-932 SENENSQSED SVGGDNDSEN GLCTEETCKG QLMGHKKRLF TFQFNNLGNT ENSP00000280377/1-981 SENENSQSED SVGGDNDSEN GLCTEDTCKG QLTGHKKRLF TFQFNNLGNT ENSBTAP00000037402/1-952 SENENSQSED SVGGDNDSEN GLCTEETCRG QLTGHKKRLF TFQFNNLGNT BACU008176/1-1009 SENENSQSED SVGGDNDSEN GLCTEETSKG QLMGHKKRLF TFQFNNLGNT 751 800 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15410T0/1-932 DINYIKDDTR HIRFDDRQLR LDERSFLALD WDPDLKKRYF DENAAEDFEK ENSP00000280377/1-981 DINYIKDDTR HIRFDDRQLR LDERSFLALD WDPDLKKRYF DENAAEDFEK ENSBTAP00000037402/1-952 DINYIKDDTR HIRFDDRQLR LDERSFLALD WDPDLKKRYF DENAAEDFEK BACU008176/1-1009 DINYIKDDTR HIRFDDRQLR LDERSFLALD WDPDLKKRYF DENAAEDFEK 801 850 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15410T0/1-932 HESVEYKPPK KPFVKLKDCI ELFTTKEKLG AEDPWYCPNC KEHQQATKKL ENSP00000280377/1-981 HESVEYKPPK KPFVKLKDCI ELFTTKEKLG AEDPWYCPNC KEHQQATKKL ENSBTAP00000037402/1-952 HESVEYKPPK KPFVKLKDCI ELFTTKEKLG AEDPWYCPNC KEHQQATKKL BACU008176/1-1009 HESVEYKPPK KPFVKLKDCI ELFTTKEKLG AEDPWYCPNC KEHQQATKKL 851 900 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_15410T0/1-932 DLWSLPPVLV VHLKRFSYSR YMRDKLDTLV DFPINDLDMS EFLINPNAGP ENSP00000280377/1-981 DLWSLPPVLV VHLKRFSYSR YMRDKLDTLV DFPINDLDMS EFLINPNAGP ENSBTAP00000037402/1-952 DLWSLPPVLV VHLKRFSYSR YMRDKLDTLV DFPINDLDMS EFLINPNAGP BACU008176/1-1009 DLWSLPPVLV VHLKRFSYSR YMRDKLDTLV DFPINDLDMS EFLINPNAGP 901 950 ENSTTRP00000010838/1-981 XXXXXXXXXX XXXXXXXXXX TAFAKNKDDG KWYYFDDSSV STASEDQIVS bmy_15410T0/1-932 CRYNLIAVSN HYGGMGGGHY TAFAKNKDDG KWYYFDDSSV STASEDQIVS ENSP00000280377/1-981 CRYNLIAVSN HYGGMGGGHY TAFAKNKDDG KWYYFDDSSV STASEDQIVS ENSBTAP00000037402/1-952 CRYNLIAVSN HYGGMGGGHY TAFAKNKDDG KWYYFDDSSV STASEDQIVS BACU008176/1-1009 CRYNLIAVSN HYGGMGGGHY TAFAKNKDDG KWYYFDDSSV STASEDQIVS 951 1000 ENSTTRP00000010838/1-981 KAAYVLFYQR QDTFSGTGFF PLDRETKGAS AATGIPLESD EDSNDNDNDI bmy_15410T0/1-932 KAAYVLFYQR QDTFSGTGFF PLDRETKGAS AATGIPLESD EDSNDNDNDI ENSP00000280377/1-981 KAAYVLFYQR QDTFSGTGFF PLDRETKGAS AATGIPLESD EDSNDNDNDI ENSBTAP00000037402/1-952 KAAYVLFYQR QDTFSGTGFF PLDRETKGAS AATGIPLESD EDSNDNDNDI BACU008176/1-1009 KAAYVLFYQR QDTFSGTGFF PLDRETKGAS AATGIPLESD EDSNDNDNDI 1001 1050 ENSTTRP00000010838/1-981 ENENCMHTN bmy_15410T0/1-932 ENENCMHTN ENSP00000280377/1-981 ENENCMHTN ENSBTAP00000037402/1-952 ENENCMHTN BACU008176/1-1009 ENENCMHTN