KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:38 2014 Check: 00 .. Name: BACU013403/1-380 Len: 764 Check: 2582 Weight: 1.00 Name: ENSP00000216237/1-705 Len: 764 Check: 2869 Weight: 1.00 Name: ENSBTAP00000037474/1-706 Len: 764 Check: 588 Weight: 1.00 Name: bmy_00996T0/1-722 Len: 764 Check: 9456 Weight: 1.00 Name: ENSTTRP00000003144/1-650 Len: 764 Check: 1970 Weight: 1.00 // 1 50 BACU013403/1-380 ---------- ---------- ---------- ---------- ---------- ENSP00000216237/1-705 ---------- ---------- ---------- -------MEK PRSIEETPSS ENSBTAP00000037474/1-706 ---------- ---------- ---------- -------MEK PRGVEETPSS bmy_00996T0/1-722 VIGPRLWEAA NECSRGEWRG QYGFPHLVTV EETVSGLMEK PRGVEET--S ENSTTRP00000003144/1-650 ---------- ---------- ---------- -------MEK PRGVEET--S 51 100 BACU013403/1-380 --MEEEEEDD DLELFGGYDS FRSYNSSVGS ESSSYLEESS EAENEDREAG ENSP00000216237/1-705 EPM-EEEEDD DLELFGGYDS FRSYNSSVGS ESSSYLEESS EAENEDREAG ENSBTAP00000037474/1-706 EPMEEEEEDD DLELFGGYDS FRSYNSSAGS ESSSYLEESS EAEHEDREAG bmy_00996T0/1-722 EPMEEEEEDD DLELFGGYDS FRSYNSSAGS ESSSYLEESS EAENEDREAG ENSTTRP00000003144/1-650 EPMEEEEEDD DLELFGGYDS FRSYNSSAGS ESSSYLEESS EAENEDREAG 101 150 BACU013403/1-380 ELPTSPLHLL SPGTPRSLDG SGSEPGAFKV SPEEGEVSEA VEEEGDIG-- ENSP00000216237/1-705 ELPTSPLHLL SPGTPRSLDG SGSEPA---- ---------- ------VCEM ENSBTAP00000037474/1-706 ELPTSPLHLL SPGTPRSLDG SGSEPA---- ---------- ------VCEM bmy_00996T0/1-722 ELPTSPLHLL SPGTPRSLDG SGSEPGAFKV SPEEGEVSEA VEEEGDIGQM ENSTTRP00000003144/1-650 ELPTSPLHLL SPGTPRSVDG SGSEPA---- ---------- ------VCEM 151 200 BACU013403/1-380 ---------- ---------- ---------- ---------Q GKPPTKKAKV ENSP00000216237/1-705 CGIVGTREAF FSKTKRFCSV SCSRSYSSNS KKASILARLQ GKPPTKKAKV ENSBTAP00000037474/1-706 CGIVGTREAF FSKTKRFCSV SCSRSYSSNS KKASILARLQ GKPPTKKAKV bmy_00996T0/1-722 CGIVGTREAF FSKTKRFCSV SCSRSYSSNS KKASILARLQ GKPPTKKAKV ENSTTRP00000003144/1-650 CGIVGTREAF FSKTKRFCSV SCSRSYSSNS KKASILARLQ GKPPTKKAKV 201 250 BACU013403/1-380 LHKAAWSAKI GAFLHSQGTG QLADGTPTGQ DALVLGFDWG KFLKDHSYKA ENSP00000216237/1-705 LHKAAWSAKI GAFLHSQGTG QLADGTPTGQ DALVLGFDWG KFLKDHSYKA ENSBTAP00000037474/1-706 LHKAAWSAKI GAFLHSQGTG QLADGTPTGQ DALVLGFDWG KFLKDHSYKA bmy_00996T0/1-722 LHKAAWSAKI GAFLHSQGTG QLADGTPTGQ DALVLGFDWG KFLKDHSYKA ENSTTRP00000003144/1-650 LHKAAWSAKI GAFLHSQGTG QLADGTPTGQ DALVLGFDWG KFLKDHSYKA 251 300 BACU013403/1-380 APVSCFKHVP LYDQWEDVMK GMKVEVLNSD AVLPSRVYWI ASVIQAAGYR ENSP00000216237/1-705 APVSCFKHVP LYDQWEDVMK GMKVEVLNSD AVLPSRVYWI ASVIQTAGYR ENSBTAP00000037474/1-706 APVSCFKHVP LYDQWEDVMK GMKVEVLNSD AVLPSRVYWI ASVIQAAGYR bmy_00996T0/1-722 APVSCFKHVP LYDQWEDVMK GMKVEVLNSD AVLPSRVYWI ASVIQAAGYR ENSTTRP00000003144/1-650 APVSCFKHVP LYDQWEDVMK GMKVEVLNSD AVLPSRVYWI ASVIQAAGYR 301 350 BACU013403/1-380 VLLRYEGFEN DASHDFWCNL GTVDVHPIGW CAINSKILVP PRTIHAKFTD ENSP00000216237/1-705 VLLRYEGFEN DASHDFWCNL GTVDVHPIGW CAINSKILVP PRTIHAKFTD ENSBTAP00000037474/1-706 VLLRYEGFEN DASHDFWCNL GTVDVHPIGW CAINSKILVP PRTIHAKFTD bmy_00996T0/1-722 VLLRYEGFEN DASHDFWCNL GTVDVHPIGW CAINSKILVP PRTIHAKFTD ENSTTRP00000003144/1-650 VLLRYEGFEN DASHDFWCNL GTVDVHPIGW CAINSKILVP PRTIHAKFTD 351 400 BACU013403/1-380 WKGYLMKRLV GSRTLPVDFH IKMVESMKYP FRQGMRLEVV DKSQVSRTRM ENSP00000216237/1-705 WKGYLMKRLV GSRTLPVDFH IKMVESMKYP FRQGMRLEVV DKSQVSRTRM ENSBTAP00000037474/1-706 WKGYLMKRLV GSRTLPVDFH IKMVESMKYP FRQGMRLEVV DKSQVSRTRM bmy_00996T0/1-722 WKGYLMKRLV GSRTLPVDFH IKMVESMKYP FRQGMRLEVV DKSQVSRTRM ENSTTRP00000003144/1-650 WKGYLMKRLV GSRTLPVDFH IKMVESMKYP FRQGMRLEVV DKSQVSRTRM 401 450 BACU013403/1-380 AVVDTVIGGR LRLLYEDGDS DDDFWCHMWS PLIHPVGWSR RVGHGIKLSG ENSP00000216237/1-705 AVVDTVIGGR LRLLYEDGDS DDDFWCHMWS PLIHPVGWSR RVGHGIKMSE ENSBTAP00000037474/1-706 AVVDTVIGGR LRLLYEDGDS DDDFWCHMWS PLIHPVGWSR RVGHGIKLSE bmy_00996T0/1-722 AVVDTVIGGR LRLLYEDGDS DDDFWCHMWS PLIHPV---- ---------E ENSTTRP00000003144/1-650 AVVDTVIGGR LRLLYEDGDS DDDFWCHMWS PLIHPVGWSR RVGHGIKLSE 451 500 BACU013403/1-380 QQKSLA---- ---------- ---------- ---------- ---SMGP--- ENSP00000216237/1-705 RRSDMAHHPT FRKIYCDAVP YLFKKVRAVY TEGGWFEEGM KLEAIDPLNL ENSBTAP00000037474/1-706 RRSDMAHHPT FRKIYCDAVP YLFKKVRAVY TEGGWFEEGM KLEAIDPLNL bmy_00996T0/1-722 RRSDMAHHPT FRKIYCDAVP YLFKKVRAVY TEGGWFEEGM KLEAIDPLNL ENSTTRP00000003144/1-650 RRSDMAHHPT FRKIYCDAVP YLFKKVRAVY TEGGWFEEGM KLEAIDPLNL 501 550 BACU013403/1-380 ---------- ---------- --GGHIST-- ---------- ---------- ENSP00000216237/1-705 GNICVATVCK VLLDGYLMIC VDGGPSTDGL DWFCYHASSH AIFPATFCQK ENSBTAP00000037474/1-706 GNICVATICK VLLDGYLMIC VDGGPSTDGS DWFCYHASSH AIFPANFCQK bmy_00996T0/1-722 GNICVATICK VLLDGYLMIC VDGGPSTDGS DWFW------ ---------- ENSTTRP00000003144/1-650 GNICVATICK VLLDGYLMIC VDGGPSTDGS DWFCYHASSH AIFP------ 551 600 BACU013403/1-380 ---------- ---------- ---------- ---------P HNHAAR---- ENSP00000216237/1-705 NDIELTPPKG YEAQTFNWEN YLEKTKSKAA PSRLFNMDCP -NHGFKVGMK ENSBTAP00000037474/1-706 NDIELTPPKG YEAHTFSWEA YLEKTKAKAA PSRLFNMDCP -NHGFKVGMK bmy_00996T0/1-722 ---------- YEAHTFNWET YLEKTKAKAA PSRLFNMDCP -NHGFKVGMK ENSTTRP00000003144/1-650 ---------- YEAHTFSWET YLEKTKAKAA PSRLFNTDCP -NHGFKVGMK 601 650 BACU013403/1-380 ---------- ---------- ---------- ---------- ---------- ENSP00000216237/1-705 LEAVDLMEPR LICVATVKRV VHRLLSIHFD GWDSEYDQWV DCESPDIYPV ENSBTAP00000037474/1-706 LEAVDLMEPR LICVATVKRV VHRLLSIHFD GWDSEYDQWV DCESPDIYPV bmy_00996T0/1-722 LEAVDLMEPR LICVATVKRV VHRLLSIHFD GWDSEYDQWV DCESPDIYPV ENSTTRP00000003144/1-650 LEAVDLMEPR LICVATVKRV VHRLLSIHFD GWDSEYDQWV DCESPDIYPV 651 700 BACU013403/1-380 ---------- ---------- ---------- ---------- ---------- ENSP00000216237/1-705 GWCELTGYQL QPPVAAEPAT PLKAKEATKK KKKQFGKKRK RIPPTKTRPL ENSBTAP00000037474/1-706 GWCELTGYQL QPPVATEPTT PLKAKEATKK KKKQFGKKRK RIPPAKTRPL bmy_00996T0/1-722 GWCELTGYQL QPPVATEPTT PLKAKEATKK KKKQFGKKRK RIPPTKTRSL ENSTTRP00000003144/1-650 GWCELTGYQL QPPVATEPTT PLKAKEATKK KKKQFGKKRK RIPPTKTRPL 701 750 BACU013403/1-380 ---------- ---------- ---------- ---------- ---------- ENSP00000216237/1-705 RQGSKKPLLE DDPQGARKIS SEPVPGEIIA VRVKEEHLDV ASPDKASSPE ENSBTAP00000037474/1-706 RQGSKKALLE EDLQAAAKAP SEPAPDEIIT VRVKEEHLDV ATADKALSPE bmy_00996T0/1-722 RQGSKKPLLE DDLQVAEKIS SEPVPDEIIT VRVKEEHLDV ATPDKAASPE ENSTTRP00000003144/1-650 RQGSKKPLLE DDLQ-AEKIS SEPVPDE--- ---------- ---------- 751 800 BACU013403/1-380 ---------- ---- ENSP00000216237/1-705 LPVSVENIKQ ETDD ENSBTAP00000037474/1-706 LPVPVENIKQ ETDD bmy_00996T0/1-722 LPVPIENIKQ ETDD ENSTTRP00000003144/1-650 ---------- ----