KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:39 2014 Check: 00 .. Name: ENSBTAP00000037486/1-129 Len: 222 Check: 370 Weight: 1.00 Name: ENSP00000291232/1-184 Len: 222 Check: 7059 Weight: 1.00 Name: ENSTTRP00000016444/1-186 Len: 222 Check: 7046 Weight: 1.00 Name: bmy_01018T0/1-218 Len: 222 Check: 1016 Weight: 1.00 Name: BACU020570/1-156 Len: 222 Check: 3449 Weight: 1.00 // 1 50 ENSBTAP00000037486/1-129 -----MQRGR RSLRGKDRPA PTQCLQTQCF DPLVRNCVAC SLLRTTGPRL ENSP00000291232/1-184 -----MRRGP RSLRGRDAPA PTPCVPAECF DLLVRHCVAC GLLRTPRPKP ENSTTRP00000016444/1-186 -----MRRGE RGLRGRDMPA TPQCLQAQCF DPLVRKCVAC SLLRTTEPRP bmy_01018T0/1-218 MGFGSMRRGA RGLRGRDRPA APQCLQTQCF DPLVRKCVAC SLLRTTEPRP BACU020570/1-156 -----MRRGA RGLRGRDRPA TPQCLQTQCF DPLVRKCVAC SLLRTTEPRP 51 100 ENSBTAP00000037486/1-129 ---------- ---------- ------AGDR SSLAPGTALQ PPESAGPGTP ENSP00000291232/1-184 ---------- ---------- -------AGA SSPAPRTALQ PQESVGAGA- ENSTTRP00000016444/1-186 ---------- ---------- -------GGP SSLAPGTALQ PQESVGPGAT bmy_01018T0/1-218 ASPPSDPPPP RSSLPSAPCS ACPSPPAGGP SSLAPGTVLQ PQESVGPGAT BACU020570/1-156 ---------- ---------- ------AGGP SSLAPGTALQ PQE------- 101 150 ENSBTAP00000037486/1-129 AEAEAALPLP ALLFGAPAPL GRA--LALAL LGLVTWKRRR RQPGAAVVPE ENSP00000291232/1-184 --GEAALPLP GLLFGAPALL GLALVLALVL VGLVSWRRRQ RRLRGAS--- ENSTTRP00000016444/1-186 --AEAALPLP ALLFGAPALL GLA--LALVL LGLVSWRRRR RRPGAAAAPE bmy_01018T0/1-218 AEAEAALPLP ALLFGAPALL GLA--LALVL LGLVSGRRRR RRPGAAAAPE BACU020570/1-156 ---------- ---------- ------ALVL LGLVSGRRRR RRPGTAAAPE 151 200 ENSBTAP00000037486/1-129 APEAAEV--- ---------- ---------- ----PEAPD- ---------- ENSP00000291232/1-184 SAEAPDGDKD APEPLDKVII LSPGISDATA PAWPPPGEDP GTTPPGHSVP ENSTTRP00000016444/1-186 ALEAPDRDQD APEPLDGDNV LSLGTLDATA PIWLPPSEDP ATTPPAHSVP bmy_01018T0/1-218 APEAPDGDQA --EPLDSDSI LSPGTLDATA PIWLPPSEDP ATTPPAHSVP BACU020570/1-156 ALEAPDGDQD --EPLDSDSI LSPGTLDATA PIWLPPSEDP ATTPPAHSVP 201 250 ENSBTAP00000037486/1-129 ---------- ---------- -- ENSP00000291232/1-184 VPATELGSTE LVTTKTAGPE QQ ENSTTRP00000016444/1-186 VPATELGSTE LVTTKTAGPE QP bmy_01018T0/1-218 VPATELGSTE LVTTKTAGPE QP BACU020570/1-156 VPATELGSTE LVTTKTAGPE QP