KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:44 2014 Check: 00 .. Name: ENSBTAP00000037548/1-407 Len: 516 Check: 4244 Weight: 1.00 Name: ENSP00000353734/1-463 Len: 516 Check: 7414 Weight: 1.00 Name: bmy_02154T0/1-463 Len: 516 Check: 4330 Weight: 1.00 Name: ENSTTRP00000008342/1-463 Len: 516 Check: 4987 Weight: 1.00 Name: BACU003661/1-467 Len: 516 Check: 7098 Weight: 1.00 // 1 50 ENSBTAP00000037548/1-407 ---------- ---------- ---------- ---------- ---------- ENSP00000353734/1-463 MATFPCQLCG KTFLTLEKFT IHNYSHSRER PYKCVQPDCG KAFVSRYKLM bmy_02154T0/1-463 MATYPCQLCG KTFLTLEKFT IHNYSHSRER PYKCLQPDCG KAFISRYKLM ENSTTRP00000008342/1-463 MATYPCQLCG KTFLTLEKFT IHNYSHSRER PYKCLQPDCG KAFISRYKLM BACU003661/1-467 ---------- ---------- ---------- ---------- ---------M 51 100 ENSBTAP00000037548/1-407 --MATHSPQK SHRCAYCEKT FNRKDHLKNH LQTHDPNKMA FGCEECGKKY ENSP00000353734/1-463 RHMATHSPQK SHQCAHCEKT FNRKDHLKNH LQTHDPNKMA FGCEECGKKY bmy_02154T0/1-463 RHMATHSPQK SHQCAHCEKT FNRKDHLKNH LQTHDPNKMA FGCEECGKKY ENSTTRP00000008342/1-463 RHMATHSPQK SHQCAHCEKT FNRKDHLKNH LQTHDPNKMA FGCEECGKKY BACU003661/1-467 RHMATHSPQK SHQCAHCEKT FNRKDHLKNH LQTHDPNKMA FGCEECGKKY 101 150 ENSBTAP00000037548/1-407 HTMLGYKRHL ALHAASSGDL TCGVCALELG STEVLLDHLK AHAEEKPSTG ENSP00000353734/1-463 NTMLGYKRHL ALHAASSGDL TCGVCALELG STEVLLDHLK AHAEEKPPSG bmy_02154T0/1-463 NTMLGYKRHL ALHAASSGDL TCGVCALELG STEVLLDHLK AHAEEKPPSG ENSTTRP00000008342/1-463 NTMLGYKRHL ALHAASSGDL TCGVCALELG STEVLLDHLK AHAEEKPPSG BACU003661/1-467 NTMLGYKRHL ALHAASSGDL TCGVCALELG STEVLLDHLK AHAEEKPPSG 151 200 ENSBTAP00000037548/1-407 TKEKKHQCDH CDRCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT ENSP00000353734/1-463 TKEKKHQCDH CERCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT bmy_02154T0/1-463 AKEKKHQCDH CERCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT ENSTTRP00000008342/1-463 AKEKKHQCDH CERCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT BACU003661/1-467 AKEKKHQCDH CERCFYTRKD VRRHLVVHTG CKDFLCQFCA QRFGRKDHLT 201 250 ENSBTAP00000037548/1-407 RHTKKTHPQE LMKESLQAGD LLNTLHALSP QFQLKAAPLS PFPIGAPTQN ENSP00000353734/1-463 RHTKKTHSQE LMKESLQTGD LLSTFHTISP SFQLKAAALP PFPLGASAQN bmy_02154T0/1-463 RHTKKTHSQE LMKESLQSGD LLNTFHSISP QFQLKAAPLP PFPLGAPAQN ENSTTRP00000008342/1-463 RHTKKTHSQE LMKESLQSGD LLNTFHSLSP QFQLKAAPLP PFPLGAPAQN BACU003661/1-467 RHTKKTHSQE LMKESLQSGD LLNTFHSISP QFQLKAAPLP PFPLGAPAQN 251 300 ENSBTAP00000037548/1-407 GLAGSLPAEV H--TLNALEQ APQPISVLSE LLAPLHPMAT PSS------- ENSP00000353734/1-463 GLASSLPAEV HSLTLSPPEQ AAQPMQPLPE SLASLHPSVS PGS------- bmy_02154T0/1-463 GLASGLPAEV HSHTHGPSEQ TSQPVPALPE LLAPLHPVAS PSS------- ENSTTRP00000008342/1-463 GLASGLPAEV HSHTHGPSEQ TSQPVPALPE LLAPLHPVAS PSS------- BACU003661/1-467 GLASGLPAEV HSHTHGPSEQ TSQPVPALPE LLAPLHPAAS PSSPPPPPQK 301 350 ENSBTAP00000037548/1-407 ---------- ---------- ---------- ---------- ------PPAP ENSP00000353734/1-463 ---------- ---------- ---------- ---------- ------PPPP bmy_02154T0/1-463 ---------- ---------- ---------- ---------- ------PPPP ENSTTRP00000008342/1-463 ---------- ---------- ---------- ---------- ------PPPP BACU003661/1-467 QKDNTRSTSX XXXXXXXXXX XXXTPQPVPA LPELLAPLPP AASPSSPPPP 351 400 ENSBTAP00000037548/1-407 LQNHKYSAGS TSYAPLAGLP LKTDTKGFCS ANLLEDLPLQ EPQSPHKLNA ENSP00000353734/1-463 LPNHKYNTTS TSYSPLASLP LKADTKGFCN ISLFEDLPLQ EPQSPQKLNP bmy_02154T0/1-463 LQNHKYNTSS TSYSPLASLP LKADTKGFCN TNLLEDLPLQ EPQSPHKLNP ENSTTRP00000008342/1-463 LQNHKYNTSS TSYSPLASLP LKADTKGFCN TNLLEDLPLQ EPQSPHKLNP BACU003661/1-467 LQNHKYNTSS TSYSPLASLP LKADTKGFCN TNLLEDLPLQ EPQSPHKLNP 401 450 ENSBTAP00000037548/1-407 GFDLAKGGAG KVNLPKELAA DAVNI-LPAS LDLSPLLGFW QLP-PATQNA ENSP00000353734/1-463 GFDLAKGNAG KVNLPKELPA DAVNLTIPAS LDLSPLLGFW QLPPPATQNT bmy_02154T0/1-463 GFDLAKGGAG KVNLPKELPA DAVNLTIPAS LDLSPLLGFW QLPPPATQNA ENSTTRP00000008342/1-463 GFDLAKGGAG KVNLPKELPA DAVNLTIPAS LDLSPLLGFW QLPPPATQNA BACU003661/1-467 GFDLAKGGAG KVNLPKELPA DAVNLTIPAS LDLSPLLGFW QLPPPATQNA 451 500 ENSBTAP00000037548/1-407 FGSSGLALGA GESLPHRLGC LGQQPQDPSL AMSTMSLGQL PLPPIPHVFP ENSP00000353734/1-463 FGNSTLALGP GESLPHRLSC LGQQQQEPPL AMGTVSLGQL PLPPIPHVFS bmy_02154T0/1-463 FGNSSLTLGP GESLPHRLSC LGQQQQDPAL AMSTMSLGQL PLPPIPHVFP ENSTTRP00000008342/1-463 FGNSSLTLGP GESLPHRLSC LGQQQQDPSL AMSTMSLGQL PLPPIPHVFP BACU003661/1-467 FGNSSLTLGP GESLPHRLSC LGQQQQDPSL AMSTMSLGQL PLPPIPHVFP 501 550 ENSBTAP00000037548/1-407 AGTGSAILPH FHHAFR ENSP00000353734/1-463 AGTGSAILPH FHHAFR bmy_02154T0/1-463 AGTGSAILPH FHHAFR ENSTTRP00000008342/1-463 AGTGSAILPH FHHAFR BACU003661/1-467 AGTGSAILPH FHHAFR