KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:50 2014 Check: 00 .. Name: ENSP00000428982/1-283 Len: 342 Check: 7112 Weight: 1.00 Name: ENSBTAP00000037680/1-283 Len: 342 Check: 7272 Weight: 1.00 Name: ENSTTRP00000004409/1-302 Len: 342 Check: 3025 Weight: 1.00 Name: bmy_18230T0/1-335 Len: 342 Check: 1633 Weight: 1.00 Name: BACU002823/1-282 Len: 342 Check: 1037 Weight: 1.00 // 1 50 ENSP00000428982/1-283 ---------- ---------- ---------- ---------- ----MAGNFW ENSBTAP00000037680/1-283 ---------- ---------- ---------- ---------- ----MAGNFW ENSTTRP00000004409/1-302 ---------- ---------- -----MVAPP LRRLVLFYQG KLCSMAGNFW bmy_18230T0/1-335 HRRRRGAEPC RSDRGARLPG GLGLWSLRGP LRRLVLFYQG KLCSMAGNFW BACU002823/1-282 ---------- ---------- ---------- ---------- ----MAGNFW 51 100 ENSP00000428982/1-283 QSSHYLQWIL DKQDLLKERQ KDLKFLSEEE YWKLQIFFTN VIQALGEHLK ENSBTAP00000037680/1-283 QSSHYLQWIL DKQDLLKERQ KDLKFLSEEE YWKLQIFFTN VIQALGEHLK ENSTTRP00000004409/1-302 QSSHYLQWIL DKQDLLKERQ KDLKFLSEEE YWKLQIFFTN VIQALGEHLK bmy_18230T0/1-335 QSSHYLQWIL DKQDLLKERQ KDLKFLSEEE YWKLQIFFTN VIQALGEHLK BACU002823/1-282 QSSHYLQWIL DKQDLLKERQ KDLKFLSEEE YWKLQIFFTN VIQALGEHLK 101 150 ENSP00000428982/1-283 LRQQVIATAT VYFKRFYARY SLKSIDPVLM APT------- CVFLASKVE- ENSBTAP00000037680/1-283 LRQQVIATAT VYFKRFYARY SLKSIDPVLM APT------- CVFLASKVE- ENSTTRP00000004409/1-302 LRQQVIATAT VYFKRFYARY SLKSIDPVLM APT------- CVFLASKVE- bmy_18230T0/1-335 LRQQVIATAT VYFKRFYARY SLKSIDPVLM APTYDVFRLV IVFLNIKCNL BACU002823/1-282 LRQQVIATAT VYFKRFYARY SLKSIDPVLM APT------- CVFLASKVE- 151 200 ENSP00000428982/1-283 -EFGVVSNTR LIAAATSVLK TRFSYAFPKE FPYRMNHILE CEFYLLELMD ENSBTAP00000037680/1-283 -EFGVVSNTR LIAAATSVLK TRFSYAFPKE FPYKMNHVLE CEFYLLELMD ENSTTRP00000004409/1-302 -EFGVVSNTR LISAATSVLK TRFSYAFPKE FPYRMNHILE CEFYLLELMD bmy_18230T0/1-335 TEFGVVSNTR LISAATSVLK TRFSYAFPKE FPYRMNHILE CEFYLLELMD BACU002823/1-282 -EFGVVSNTR LISAATSVLK TRFSYAFPKE FPYRMNHILE CEFYLLELMD 201 250 ENSP00000428982/1-283 CCLIVYHPYR PLLQYVQDMG QEDMLLPLAW RIVNDTYRTD LCLLYPPFMI ENSBTAP00000037680/1-283 CCLIVYHPYR PLLQYVQDMG QEDMLLPLAW RIVNDTYRTD LCLLYPPFMI ENSTTRP00000004409/1-302 CCLIVYHPYR PLLQYVQDMG QEDMLLPLAW RIVNDTYRTD LCILYPPFMI bmy_18230T0/1-335 CCLIVYHPYR PLLQYVQDMG QEDMLLPLAW RIVNDTYRTD LCLLYPPFMI BACU002823/1-282 CCLIVYHPYR PLLQYVQDMG QEDMLLPLAW RIVNDTYRTD LCLLYPPFMI 251 300 ENSP00000428982/1-283 ALACLHVACV VQQKDARQWF AELSVDMEKI LEIIRVILKL YEQWKNFDER ENSBTAP00000037680/1-283 ALACLHVACV VQQKDARQWF AELSVDMEKI LEIIRVILKL YEQWKNFDER ENSTTRP00000004409/1-302 ALACLHVACV VQQKDARQWF AELSVDMEKI LEIIRVILKL YEQWKNFDER bmy_18230T0/1-335 ALACLHVACV VQQKDARQWF AELSVDMEKI LEIIRVILKL YEQWKNFDER BACU002823/1-282 ALACLHVACV VQQKDARQWF AELSVDMEKI LEIIRVILKL YEQWKNFDER 301 350 ENSP00000428982/1-283 KEMATILSKM PKPKPPPNSE G------EQG PNGSQNSSYS QS ENSBTAP00000037680/1-283 KEMATILSKM PKPKPPPNSE G------EQG PNGSQNSSYS QS ENSTTRP00000004409/1-302 KEMATILSKM PKPKPPPNSE G------EQG PNGSQNSSYS QS bmy_18230T0/1-335 KEMATILSKM PKPKPPPNRN SLSDSSLVAG PEAAR----- -- BACU002823/1-282 KEMATILSKM PKPKPPPNRN SLSDSSLVAG PEAAR----- --