KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:47:51 2014 Check: 00 ..
Name: ENSP00000245564/1-570 Len: 572 Check: 128 Weight: 1.00
Name: BACU020069/1-174 Len: 572 Check: 9497 Weight: 1.00
Name: ENSTTRP00000012650/1-175 Len: 572 Check: 9939 Weight: 1.00
Name: bmy_03393T0/1-571 Len: 572 Check: 4427 Weight: 1.00
Name: ENSBTAP00000037709/1-572 Len: 572 Check: 2071 Weight: 1.00
//
1 50
ENSP00000245564/1-570 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALGRATDSKE PPGELCPDVL
BACU020069/1-174 ---------- ---------- -------MDP TVCM------ ----------
ENSTTRP00000012650/1-175 ---------- ---------- -------MDP TVCM------ ----------
bmy_03393T0/1-571 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALCRPTDAKE PPGELCPDVL
ENSBTAP00000037709/1-572 MAGGAREVLT LQLGHFAGFV GAHWWNQQDA ALCRPTDAKE PPGELCPDVL
51 100
ENSP00000245564/1-570 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK EEGGLYRDKQ LDAAIAWQGK
BACU020069/1-174 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ----------
bmy_03393T0/1-571 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK QEGGLYRDKQ LDAAIAWQGK
ENSBTAP00000037709/1-572 YRTGRTLHGQ ETYTPRLILM DLKGSLSSLK QEGGLYRDKQ LDAAIAWQGK
101 150
ENSP00000245564/1-570 LTTHKEELYP KNPYLQDFLS AEGVLSSDGV WRVKSIPNGK GSSPLPTATT
BACU020069/1-174 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ----------
bmy_03393T0/1-571 LTTHKEELYP KNPYLQDLLS AEGVLSSDGI WRVKSIPNGK GPPPFTTATT
ENSBTAP00000037709/1-572 LTTHKEELYP KNPYLQDLLS AEGVLSSDGT WRVKSIPNGK GLPPFTNAIT
151 200
ENSP00000245564/1-570 PKPLIPTEAS IRVWSDFLRV HLHPRSICMI QKYNHDGEAG RLEAFGQGES
BACU020069/1-174 ---------- ---WGPF--- ---------- ---------- ----------
ENSTTRP00000012650/1-175 ---------- ---WGPF--- ---------- ---------- ----------
bmy_03393T0/1-571 PKPVIPTEGS IRVWSDFLRV PLHPRSICMI QKYNHDGETG RLEAFGQGES
ENSBTAP00000037709/1-572 PKPVMPTEGS IRVWSDFLRV HLHPRSICMI HKYNHDGEAG RLEAFGQGES
201 250
ENSP00000245564/1-570 VLKEPKYQEE LEDRLHFYVE ECDYLQGFQI LCDLHDGFSG VGAKAAELLQ
BACU020069/1-174 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ----------
bmy_03393T0/1-571 ILKEPKYLEE LEDRLHFYVE ECDYLQGFQI LCDLHNGFSG VGAKAAELLQ
ENSBTAP00000037709/1-572 ILKEPKYLEE LEDRLHFYVE ECDYLQGFQI LCDLHDGFSG LGAKAAELLQ
251 300
ENSP00000245564/1-570 DEYSGRGIIT WGLLPGPYHR GEAQRNIYRL LNTAFGLVHL TAHSSLVCPL
BACU020069/1-174 ---------- WNM------- ---------- ---------- -----LLCPV
ENSTTRP00000012650/1-175 ---------- WNV------- ---------- ---------- -----LLCPV
bmy_03393T0/1-571 DEYSGRGIIT WGLLPGPYRL GEPQKNIYRL LNTAFGLVHL SAHSSLVCPL
ENSBTAP00000037709/1-572 DEYSGRGIIT WGLLPGPYRL GELQKNIYRL LNTAFGLVHL SAHSSLVCPL
301 350
ENSP00000245564/1-570 SLGGSLGLRP EPPVSFPYLH YDATLPFHCS AILATALDTV TVPYRLCSSP
BACU020069/1-174 ---------- ---------- --------CG A--------- ----------
ENSTTRP00000012650/1-175 ---------- ---------- --------RG A--------- ----------
bmy_03393T0/1-571 SLGGSLGLQP EPPVNFPHLQ YDAALPFHCG AILATALDTV TVPYRLCSSP
ENSBTAP00000037709/1-572 SLGGSLGLRP EPPVSFPLLQ YDATLPFHCG AILATALDTV TVPYRLRSSP
351 400
ENSP00000245564/1-570 VSMVHLADML SFCGKKVVTA GAIIPFPLAP GQSLPDSLMQ FGGATPWTPL
BACU020069/1-174 ---------- ---------- ---------- ---------- ----------
ENSTTRP00000012650/1-175 ---------- ---------- ---------- ---------- ----------
bmy_03393T0/1-571 ISMVHLADML NFSGKKVVTA GATIPFPLVP SQSLPDTLMQ LGEATPWTPL
ENSBTAP00000037709/1-572 VSMVHLADML NFSGKKVVTA GATIPFPSVP SQSLPDTLMQ LGEATPWTPL
401 450
ENSP00000245564/1-570 SACGEPSGTR CFAQSVVLRG IDRACHTSQL TPGTPPPSAL HACTTGEEIL
BACU020069/1-174 ---------- --------EG -DTACHTSQL TPGTPLPSLL HACTTGEEVL
ENSTTRP00000012650/1-175 ---------- --------EG LDRACHTSQL TPGTPLPSPL HACTTGEEVL
bmy_03393T0/1-571 SACGNPSGTC CFAQSVVLRG LDRECHTSQL TPGTPLPSLL HACTTGEEVL
ENSBTAP00000037709/1-572 SACGDPSGTC CFAQSVVLRG LDRAHHTSQL APGTPLPSPL HACATGEEVL
451 500
ENSP00000245564/1-570 AQYLQQQQPG VMSSSHLLLT PCRVAPPYPH LFSSC-SPPG MVLDGSPKGA
BACU020069/1-174 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSLSQQG LVLDGPPTGA
ENSTTRP00000012650/1-175 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSFSQQG LVLDGPPTGA
bmy_03393T0/1-571 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPY LFSSSLSQQG LVLDGPPTGA
ENSBTAP00000037709/1-572 AQYLQQQQPR VRSSSHLLLT PCKVVPPYPS LFSSSLSQHG SVLDGLPTGT
501 550
ENSP00000245564/1-570 AVESIPVFGA LCSSSSLHQT LEALARDLTK LDLRRWASFM DAGVEHDDVA
BACU020069/1-174 AVESIPVLGA LCSSSSLNRT LGDLAKDLAR LDLRRWASFM DAGVEQDDLE
ENSTTRP00000012650/1-175 AVESIPVLGA LCSSSSLNRA LGDLAKDLAR LDLRRWASFM DAGVEQDDLE
bmy_03393T0/1-571 AVESIPVLGA LCSSSSLNRT LGDLAKDLAR LDLRRWASFM DAGVEQDDLE
ENSBTAP00000037709/1-572 AVESIPVLGA LCSSSSLNRA LGDLAKDLSK LDLRRWASFM DAGVEQDDLE
551 600
ENSP00000245564/1-570 ELLQELQSLA QCYQGGDS-L VD
BACU020069/1-174 ETLQELRSLA QCYQSGNS-L LD
ENSTTRP00000012650/1-175 ETLQELRSLA QCYQSGDS-L MD
bmy_03393T0/1-571 EMLQELRSLA QCYQSGDS-L MD
ENSBTAP00000037709/1-572 ETLQDLRSLA QCYEGGDDRL VD