KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:53 2014 Check: 00 .. Name: ENSP00000435412/1-744 Len: 985 Check: 584 Weight: 1.00 Name: BACU007565/1-744 Len: 985 Check: 9573 Weight: 1.00 Name: bmy_02013T0/1-963 Len: 985 Check: 9974 Weight: 1.00 Name: ENSBTAP00000037744/1-735 Len: 985 Check: 2418 Weight: 1.00 // 1 50 ENSP00000435412/1-744 MEQDPKPPRL RLWALIPWLP RK-QRPRISQ TS-------- ---------- BACU007565/1-744 MEQDPKLPRL RLWALLPWLP RK-QRPRISQ TS-------- ---------- bmy_02013T0/1-963 ---MPLAQLK EPWPLMELVP LDPERPCATA LTGMGFHEDG IQARDPWTGG ENSBTAP00000037744/1-735 ---MPLAQLK EPWPLMELVP LDPENGQA-- ---------- ---------- 51 100 ENSP00000435412/1-744 ---------- ---------- ---------- -------LPV PG-------- BACU007565/1-744 ---------- ---------- ---------- -------LPA PG-------- bmy_02013T0/1-963 SHIGPVEPPE SSKILLSLVD LVLLPRLLRD DSRSCPVDPA PGSKVLDLPG ENSBTAP00000037744/1-735 ---------- ---------- ---------- ---------- SG-------- 101 150 ENSP00000435412/1-744 ---------- ---------- ---------- ------PGSG PQRD------ BACU007565/1-744 ---------- ---------- ---------- ------PGSG PRQD------ bmy_02013T0/1-963 LSTLSLCRRG GDSFFQLPKA QMGMDKPQGK KLDFSRPRGG SEKEGVRDPA ENSBTAP00000037744/1-735 ---------- ---------- ---------- ------EEAG LQPS------ 151 200 ENSP00000435412/1-744 ---------S DEGVLKEISI THHVKAGSEK ADPSHFELLK VLGQGSFGKV BACU007565/1-744 ---------S DEDVLKEISI THHVKAGSEK ADPSHFELLK VLGQGSFGKV bmy_02013T0/1-963 FWAKKAEKAE DEDVLKEISI THHVKAGSEK ADPSHFELLK VLGQGSFGKV ENSBTAP00000037744/1-735 ---------K DEGVLKEISI THHVKAGSEK ADPSHFELLK VLGQGSFGKV 201 250 ENSP00000435412/1-744 FLVRKVTRPD SGHLYAMKVL KKATLKVRDR VRTKMERDIL ADVNHPFVVK BACU007565/1-744 FLVRKVTRPD SGHLYAMKVL KKATLKVRDR VRTKMERDIL ADVNHPFVVK bmy_02013T0/1-963 FLVRKVTRPD SGHLYAMKVL KKATLKVRDR VRTKMERDIL ADVNHPFVVK ENSBTAP00000037744/1-735 FLVRKVTRPD SGHLYAMKVL KKATLKVRDR VRTKMERDIL ADVNHPFVVK 251 300 ENSP00000435412/1-744 LHYAFQTEGK LYLILDFLRG GDLFTRLSKE VMFTEEDVKF YLAELALGLD BACU007565/1-744 LHYAFQTEGK LYLILDFLRG GDLFTRLSKE VMFTEEDVKF YLAELALGLD bmy_02013T0/1-963 LHYAFQTEGK LYLILDFLRG GDLFTRLSKE VMFTEEDVKF YLAELALGLD ENSBTAP00000037744/1-735 LHYAFQTEGK LYLILDFLRG GDLFTRLSKE VMFTEEDVKF YLAELALGLD 301 350 ENSP00000435412/1-744 HLHSLGIIYR DLKPENILLD EEGHIKLTDF GLSKEAIDHE KKAYSFCGTV BACU007565/1-744 HLHSLGIIYR DLKPENILLD EEGHIKLTDF GLSKEAIDHE KKAYSFCGTV bmy_02013T0/1-963 HLHSLGIIYR DLKPENILLD EEGHIKLTDF GLSKEAIDHE KKAYSFCGTV ENSBTAP00000037744/1-735 HLHSLGIIYR DLKPENILLD EEGHIKLTDF GLSKEAIDHE KKAYSFCGTV 351 400 ENSP00000435412/1-744 EYMAPEVVNR QGHSHSADWW SYGVLMFEML TGSLPFQGKD RKETMTLILK BACU007565/1-744 EYMAPEVVNR QGHTHSADWW SYGVLMFEML TGSLPFQGKD RKETMTLILK bmy_02013T0/1-963 EYMAPEV--- ---------- ------FEML TGSLPFQGKD RKETMTLILK ENSBTAP00000037744/1-735 EYMAPEVVNR QGHTHSADWW SYGVLMFEML TGSLPFQGKD RKETMTLILK 401 450 ENSP00000435412/1-744 AKLGMPQFLS TEAQSLLRAL FKRNPANRLG SGPDGAEEIK RHVFYSTIDW BACU007565/1-744 AKLGMPQFLS TEAQSLLRSL FKRNPANRLG SGPDGAEEIK RHVFYSTIDW bmy_02013T0/1-963 AKLGMPQFLS TEAQSLLRSL FKRNPANRLG SGPDGAEEIK RHVFYSTIDW ENSBTAP00000037744/1-735 AKLGMPQFLS TEAQSLLRAL FKRNPANRLG SGPDGAEEIK RHVFYSTIDW 451 500 ENSP00000435412/1-744 NKLYRREIKP PFKPAVAQPD DTFYFDTEFT SRTPK----- ---------- BACU007565/1-744 NKLYRREIKP PFKPAVAQPD DTFYFDTEFT SRTPK----- ---------- bmy_02013T0/1-963 NKLYRREIKP PFKPAVAQPD DTFYFDTEFT SRTPKGAPFV RFVLDWYGRE ENSBTAP00000037744/1-735 NKLYRREIKP PFKPAVAQPD DTFYFDTEFT SRTPK----- ---------- 501 550 ENSP00000435412/1-744 ---------- --------DS PGIPPSAGAH QLFRGFSFVA TGLMEDDGKP BACU007565/1-744 ---------- --------DS PGIPPSAGAH QLFRGFSFVA TGLMEDDGKP bmy_02013T0/1-963 AGSQGPRGTG VVRAAAGPDS PGIPPSAGAH QLFRGFSFVA TGLMEDDGKP ENSBTAP00000037744/1-735 ---------- --------DS PGIPPSAGAH QLFRGFSFVA TGLMEDDGKP 551 600 ENSP00000435412/1-744 RAPQAPLHSV V--------- ---QQLHGKN LVFSDGYVVK ETIGVGSYSE BACU007565/1-744 RAMQAPLHSV V--------- ---QQLHGKN LVFSDGYVVK ETIGVGSYSE bmy_02013T0/1-963 RATQAPLHSV VQSSGSVPPV GLLQQLHGKN LVFSDGYVVK ETIGVGSYSE ENSBTAP00000037744/1-735 RATQAPLHAV V--------- ---QQLHGKN LVFSDGYVVK ETIGVGSYSE 601 650 ENSP00000435412/1-744 CKRCVHKATN MEYAVKVIDK SKRDPSEEIE ILLRYGQHPN IITLKDVYDD BACU007565/1-744 CKRCVHKATT MEYAVKVIDK SKRDPSEEIE ILLRYGQHPN IITLKDVYDD bmy_02013T0/1-963 CKRCVHKATT MEYAVKVIDK SKRDPSEEIE ILLRYGQHPN IITLKDVYDD ENSBTAP00000037744/1-735 CKRCVHKATN MEYAVKVIDK SKRDPSEEIE ILLRYGQHPN IITLKDVYDD 651 700 ENSP00000435412/1-744 GKHVYLVTEL MRGGELLDKI LRQKFFSERE ASFVLHTIGK TVEYLHSQGV BACU007565/1-744 GKHVYLVTEL MRGGELLDKI LRQKFFSERE ASFVLHTIGK TVEYLHSQGV bmy_02013T0/1-963 GKHVYLVTEL MRGGELLDKI LRQKFFSERE ASFVLHTIGK TVEYLHSQGV ENSBTAP00000037744/1-735 GKHVYLVTEL MRGGELLDKI LRQKFFSERE ASFVLHTISK TVEYLHSQGV 701 750 ENSP00000435412/1-744 VHRDLKPSNI LYVDESGNPE CLRICDFGFA KQLRAENGLL MTPCYTANFV BACU007565/1-744 VHRDLKPSNI LYVDESGNPE CLRICDFGFA KQLRAENGLL MTPCYTANFV bmy_02013T0/1-963 VHRDLKPSNI LYVDESGNPE CLRICDFGFA KQLRAENGLL MTPCYTANFV ENSBTAP00000037744/1-735 VHRDLKPSNI LYVDESGNPE CLRICDFGFA KQLRAENGLL MTPCYTANFV 751 800 ENSP00000435412/1-744 APE------- ---------- ---------- ---------- ---------- BACU007565/1-744 APE------- ---------- ---------- ---------- ---------- bmy_02013T0/1-963 APEVSGLASS AARVRGPGTG SLVSLPEAPR CPEPVSVALA QVPREDQPRP ENSBTAP00000037744/1-735 APE------- ---------- ---------- ---------- ---------- 801 850 ENSP00000435412/1-744 ---------- ---------- ---------- ----VLKRQG YDEGCDIWSL BACU007565/1-744 ---------- ---------- ---------- ----VLKRQG YDEGCDIWSL bmy_02013T0/1-963 GTLVLPFGEE QASIWGHSPL PLGLTTLPCL PSCQVLKRQG YDEGCDIWSL ENSBTAP00000037744/1-735 ---------- ---------- ---------- ----VLKRQG YDEGCDIWSL 851 900 ENSP00000435412/1-744 GILLYTMLAG YTPFANGPSD TPEEILTRIG SGKFTLSGGN WNTVSETAKD BACU007565/1-744 GILLYTMLAG YTPFANGPSD TPEEILTRIG SGKFTLSGGN WNTVSDTAKD bmy_02013T0/1-963 GILLYTMLAG YTPFANGPSD TPEEILTRIG SGKFTLSGGN WNTVSDTAKD ENSBTAP00000037744/1-735 GILLYTMLAG YTPFANGPSD TPEEILTRIG SGKFTLSGGN WNTVSDTAKD 901 950 ENSP00000435412/1-744 LVSKMLHVDP HQRLTAKQVL QHPWVTQKDK LPQSQLSHQD LQLVKGAMAA BACU007565/1-744 LVSKMLHVDP HQRLTAKQVL QHPWITQKDK LPQSQLSHQD LQIVKGAMAA bmy_02013T0/1-963 LVSKMLHVDP HQRLTAKQVL QHPWITQKDK LPQSQLSHQD LQIVKGAMAA ENSBTAP00000037744/1-735 LVSKMLHVDP HQRLTAKQVL QHPWITQKDK LPQSQLSHQD LQLVKGAMAA 951 1000 ENSP00000435412/1-744 TYSALNSSKP TPQLKPIESS ILAQRRVRKL PSTTL BACU007565/1-744 TYSALNSSKP TPQLKPIESS ILAQRRVRKL PSTTL bmy_02013T0/1-963 TYSALNSSKP TPQLKPIESS ILAQRRVRKL PSTTL ENSBTAP00000037744/1-735 TYSALNSSKP TPQLKPIESS ILAQRRVRKL PSTTL