KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:55 2014 Check: 00 .. Name: ENSTTRP00000013106/1-746 Len: 797 Check: 9311 Weight: 1.00 Name: BACU020132/1-747 Len: 797 Check: 9981 Weight: 1.00 Name: ENSBTAP00000037777/1-749 Len: 797 Check: 2214 Weight: 1.00 Name: bmy_14568T0/1-735 Len: 797 Check: 4136 Weight: 1.00 Name: ENSP00000450399/1-736 Len: 797 Check: 7989 Weight: 1.00 // 1 50 ENSTTRP00000013106/1-746 RGRPRGFGIF RVMEALIPVI NKLQDVFNTV GADIIQLPQI VVVGT----- BACU020132/1-747 ----RGFGIF RVMEALIPVI NKLQDVFNTV GADIIQLPQI VVVGTQVRDE ENSBTAP00000037777/1-749 ---------- --MEALIPVI NKLQDVFNTV GADIIQLPQI VVVGT----- bmy_14568T0/1-735 ---------- --MEALIPVI NKLQDVFNTV GADIIQLPQI VVVGTQHSLT ENSP00000450399/1-736 ---------- --MEALIPVI NKLQDVFNTV GADIIQLPQI VVVGT----- 51 100 ENSTTRP00000013106/1-746 ---------- --------QX XXXXXXXX-- ---XXXXXXX XXXXXXXXXX BACU020132/1-747 GGFRPG---- --------QS PGRGPGRDCG SACSQTGQRF EILG---IST ENSBTAP00000037777/1-749 ---------- --------QS SGKSSVLE-- ---SLVGRDL LPRGTGIVTR bmy_14568T0/1-735 ELQKNLLRNS FCSCVFRFQS SGKSSVLE-- ---SLVGRDL LPRGTGIVTR ENSP00000450399/1-736 ---------- --------QS SGKSSVLE-- ---SLVGRDL LPRGTGIVTR 101 150 ENSTTRP00000013106/1-746 XXXXXXXXXX XXXXXXXXXX XXXXPATWKN SRHLSKXXXX XXXXXXXXXX BACU020132/1-747 KLIILCCFSL TTD------- ----PATWKN SRHLSKG--- -----FLYPF ENSBTAP00000037777/1-749 RPLILQLVHV APEDKRKTTG EENDPATWKN SRHLSKGVEA EEWGKFLHTK bmy_14568T0/1-735 RPLILQLVHV SPEDKRKTTG EEN------- ------GVEA EEWGKFLHTK ENSP00000450399/1-736 RPLILQLVHV SQEDKRKTTG EEN------- ------GVEA EEWGKFLHTK 151 200 ENSTTRP00000013106/1-746 XXXXXXXXXX XXXXXXXXXX XXX------- -XXXGVSPEP IHLKIFSPNV BACU020132/1-747 -VFGPSFPIM PACVLLYSYR LCAFFFFHFY LPIHGVSPEP IHLKIFSPHV ENSBTAP00000037777/1-749 NKLYTDFDEI RQEIENETER ISG------- -NNKGVSPEP IHLKIFSPNV bmy_14568T0/1-735 ---------- ---------- ---------- --NKGVSPEP IHLKIFSPHV ENSP00000450399/1-736 NKLYTDFDEI RQEIENETER ISG------- -NNKGVSPEP IHLKIFSPNV 201 250 ENSTTRP00000013106/1-746 VNLTLVDLPG MTKVPVGDQP KDIELQIREL ILRFISNPNS IILAVTAANT BACU020132/1-747 VNLTLVDLPG MTKVPVGDQP KDIELQIREL ILRFISNPNS IILAVTAANT ENSBTAP00000037777/1-749 VNLTLVDLPG MTKVPVGDQP KDIELQIREL ILRFISNPNS IILAVTAANT bmy_14568T0/1-735 VNLTLVDLPG MTKVPVGDQP KDIELQIREL ILRFISNPNS IILAVTAANT ENSP00000450399/1-736 VNLTLVDLPG MTKVPVGDQP KDIELQIREL ILRFISNPNS IILAVTAANT 251 300 ENSTTRP00000013106/1-746 DMATSEALKI SREVDPDGRR TLAVITKLDL MDAGTDAMDV LMGRVIPVKL BACU020132/1-747 DMATSEALKI SREVDPDGRR TLAVITKLDL MDAGTDAMDV LMGRVIPVKL ENSBTAP00000037777/1-749 DMATSEALKI SREVDPDGRR TLAVITKLDL MDAGTDAMDV LMGRVIPVKL bmy_14568T0/1-735 DMATSEALKI SREVDPDGRR TLAVITKLDL MDAGTDAMDV LMGRVIPVKL ENSP00000450399/1-736 DMATSEALKI SREVDPDGRR TLAVITKLDL MDAGTDAMDV LMGRVIPVKL 301 350 ENSTTRP00000013106/1-746 GIIGIVNRSQ LDINNKKSVT DSIRDEYAFL QKKYPSLANR NGTKYLARTL BACU020132/1-747 GIIGIVNRSQ LDINNKKSVT DSIRDEYAFL QKKYPSLANR NGTKYLARTL ENSBTAP00000037777/1-749 GIIGVVNRSQ LDINNKKSVT DSIRDEYAFL QKKYPSLANR NGTKYLARTL bmy_14568T0/1-735 GIIGIVNRSQ LDINNKKSVT DSIRDEYAFL QKKYPSLANR NGTKYLARTL ENSP00000450399/1-736 GIIGVVNRSQ LDINNKKSVT DSIRDEYAFL QKKYPSLANR NGTKYLARTL 351 400 ENSTTRP00000013106/1-746 NRLLMHHIRD CLPELKTRIN VLAAQYQSLL NSYGEPVDDK SATLLQLITK BACU020132/1-747 NRLLMHHIRD CLPELKTRIN VLAAQYQSLL NSYGEPVDDK SATLLQLITK ENSBTAP00000037777/1-749 NRLLMHHIRD CLPELKTRIN VLAAQYQSLL NSYGEPVDDK SATLLQLITK bmy_14568T0/1-735 NRLLMHHIRD CLPELKTRIN VLAAQYQSLL NSYGEPVDDK SATLLQLITK ENSP00000450399/1-736 NRLLMHHIRD CLPELKTRIN VLAAQYQSLL NSYGEPVDDK SATLLQLITK 401 450 ENSTTRP00000013106/1-746 FATEYCNTIE GTAKYIETSE LCGGARICYI FHETFGRTLE SVDPLGGLNT BACU020132/1-747 FATEYCNTIE GTAKYIETSE LCGGARICYI FHETFGRTLE SVDPLGGLNT ENSBTAP00000037777/1-749 FATEYCNTIE GTAKYIETSE LCGGARICYI FHETFGRTLE SVDPLGGLNT bmy_14568T0/1-735 FATEYCNTIE GTAKYIETSE LCGGARICYI FHETFGRTLE SVDPLGGLNT ENSP00000450399/1-736 FATEYCNTIE GTAKYIETSE LCGGARICYI FHETFGRTLE SVDPLGGLNT 451 500 ENSTTRP00000013106/1-746 IDILTAIRNA TGPRPALFVP EVSFELLVKR QIKRLEEPSL RCVELVHEEM BACU020132/1-747 IDILTAIRNA TGPRPALFVP EVSFELLVKR QIKRLEEPSL RCVELVHEEM ENSBTAP00000037777/1-749 IDILTAIRNA TGPRPALFVP EVSFELLVKR QIKRLEEPSL RCVELVHEEM bmy_14568T0/1-735 IDILTAIRNA TGPRPALFVP EVSFELLVKR QIKRLEEPSL RCVELVHEEM ENSP00000450399/1-736 IDILTAIRNA TGPRPALFVP EVSFELLVKR QIKRLEEPSL RCVELVHEEM 501 550 ENSTTRP00000013106/1-746 QRIIQHCSNY STQELLRFPK LHDAIVEVVT CLLRKRLPVT NEMVHNLVAI BACU020132/1-747 QRIIQHCSNY STQELLRFPK LHDAIVEVVT CLLRKRLPVT NEMVHNLVAI ENSBTAP00000037777/1-749 QRIIQHCSNY STQELLRFPK LHDAIVEVVT CLLRKRLPVT NEMVHNLVAI bmy_14568T0/1-735 QRIIQHCSNY STQELLRFPK LHDAIVEVVT CLLRKRLPVT NEMVHNLVAI ENSP00000450399/1-736 QRIIQHCSNY STQELLRFPK LHDAIVEVVT CLLRKRLPVT NEMVHNLVAI 551 600 ENSTTRP00000013106/1-746 ELAYINTKHP DFADACGLMN NNIEEQRRNR LARELPSAVS RDKSSKVPSA BACU020132/1-747 ELAYINTKHP DFADACGLMN NNIEEQRRNR LARELPSAVS RDKSSKVPSA ENSBTAP00000037777/1-749 ELAYINTKHP DFADACGLMN NNIEEQRRNR LARELPSAVS RDKSSKVPSA bmy_14568T0/1-735 ELAYINTKHP DFADACGLMN NNIEEQRRNR LARELPSAVS RDKSSKVPSA ENSP00000450399/1-736 ELAYINTKHP DFADACGLMN NNIEEQRRNR LARELPSAVS RDKSSKVPSA 601 650 ENSTTRP00000013106/1-746 LAPASQEPSP AASAEADGK- ---------- VASGGGGVGD GVQ-PTTG-W BACU020132/1-747 LAPASQEPSP AASAEADGK- ---------- VASGGGGVGD GVQEPTTGNW ENSBTAP00000037777/1-749 LAPASQEPSP AASAEADGKL IQESRRETKN AASGGGGVGD AVQEPTTGNW bmy_14568T0/1-735 LAPASQEPSP AASAEADGKL IQDSRRETKN VASGGGGVGD GVQEPTTGNW ENSP00000450399/1-736 LAPASQEPSP AASAEADGKL IQDSRRETKN VASGGGGVGD GVQEPTTGNW 651 700 ENSTTRP00000013106/1-746 RGMLKTSKAE --LLAEKSKP IPIMPASPQK GHAVNLLDVX XXXXXKLSAR BACU020132/1-747 RGMLKTSKAE ELLAEEKSKP IPIMPASPQK GHAVNLLDVP VPVARKLSAR ENSBTAP00000037777/1-749 RGMLKTSKAE ELLAEEKSKP IPIMPASPQK GHAVNLLDVP VPVARKLSAR bmy_14568T0/1-735 RGMLKTSKAE ELLAEEKSKP IPIMPASPQK GHAVNLLDVP VPVARKLSAR ENSP00000450399/1-736 RGMLKTSKAE ELLAEEKSKP IPIMPASPQK GHAVNLLDVP VPVARKLSAR 701 750 ENSTTRP00000013106/1-746 EQRDCEVIER LIKSYFLIVR KNIQDSVPKA VMHFLVNHVK DTLQSELVGQ BACU020132/1-747 EQRDCEVIER LIKSYFLIVR KNIQDSVPKA VMHFLVNHVK DTLQSELVGQ ENSBTAP00000037777/1-749 EQRDCEVIER LIKSYFLIVR KNIQDSVPKA VMHFLVNHVK DTLQSELVGQ bmy_14568T0/1-735 EQRDCEVIER LIKSYFLIVR KNIQDSVPKA VMHFLVNHVK DTLQSELVGQ ENSP00000450399/1-736 EQRDCEVIER LIKSYFLIVR KNIQDSVPKA VMHFLVNHVK DTLQSELVGQ 751 800 ENSTTRP00000013106/1-746 LYKSSLLDDL LTESEDMAQR RKEAADMLKA LQGASQIIAE IRETHLW BACU020132/1-747 LYKSSLLDDL LTESEDMAQR RKEAADMLKA LQGASQIIAE IRETHLW ENSBTAP00000037777/1-749 LYKSSLLDDL LTESEDMAQR RKEAADMLKA LQGASQIIAE IRETHLW bmy_14568T0/1-735 LYKSSLLDDL LTESEDMAQR RKEAADMLKA LQGASQIIAE IRETHLW ENSP00000450399/1-736 LYKSSLLDDL LTESEDMAQR RKEAADMLKA LQGASQIIAE IRETHLW