KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:47:56 2014 Check: 00 .. Name: ENSP00000362900/1-494 Len: 548 Check: 7570 Weight: 1.00 Name: ENSBTAP00000037803/1-493 Len: 548 Check: 467 Weight: 1.00 Name: ENSTTRP00000002413/1-493 Len: 548 Check: 3232 Weight: 1.00 Name: bmy_08025T0/1-459 Len: 548 Check: 7872 Weight: 1.00 Name: BACU003273/1-542 Len: 548 Check: 5264 Weight: 1.00 // 1 50 ENSP00000362900/1-494 MPRVYIGRLS YQARERDVER FFKGYGKILE VDLKNGYGFV EFDDLRDADD ENSBTAP00000037803/1-493 MPRVYIGRLS YQARERDVER FFKGYGKILE VDLKNGYGFV EFDDLRDADD ENSTTRP00000002413/1-493 MPRVYIGRLS YQARERDVER FFKGYGKILE VDLKNGYGFV EFDDLRDADD bmy_08025T0/1-459 ---------- ---------- ---------- ----MRYGFV EFDDLRDADD BACU003273/1-542 MPRVYIGRLS YQARERDVER FFKGYGKILE VDLKNGYGFV EFDDLRDADD 51 100 ENSP00000362900/1-494 AVYELNGKDL CGERVIVEHA RGPRRDGSYG SGRSGYGYRR SGRDKYGPPT ENSBTAP00000037803/1-493 AVYELNGKDL CGERVIVEHA RGPRRDGSYG SGRSGYGYRR SGRDKYGPPT ENSTTRP00000002413/1-493 AVYELNGKDL CGERVIVEHA RGPRRDGSYG SGRSGYGYRR SGRDKYGPPT bmy_08025T0/1-459 AVYELNGKDL CGERVIVEHA RGPRRDGSYG SGRSGYGYRR SGRDKYGPPT BACU003273/1-542 AVYELNGKDL CGERVIVEHA RGPRRDGSYG SGRSGYGYRR SGRDKYGPPT 101 150 ENSP00000362900/1-494 RTEYRLIVEN LSSRCSWQDL KDYMRQAGEV TYADAHKGRK NEGVIEFVSY ENSBTAP00000037803/1-493 RTEYRLIVEN LSSRCSWQDL KDYMRQAGEV TYADAHKGRK NEGVIEFVSY ENSTTRP00000002413/1-493 RTEYRLIVEN LSSRCSWQDL KDYMRQAGEV TYADAHKGRK NEGVIEFVSY bmy_08025T0/1-459 RTEYRLIVEN LSSRCSWQDL KDYMRQAGEV TYADAHKGRK NEGVIEFVSY BACU003273/1-542 RTEYRLIVEN LSSRCSWQDL KDYMRQAGEV TYADAHKGRK NEGVIEFVSY 151 200 ENSP00000362900/1-494 SDMKRALEKL DGTEVNGRKI RLVEDKPGSR RRRSYSRSRS HSRSRSRSRH ENSBTAP00000037803/1-493 SDMKRALEKL DGTEVNGRKI RLVEDKPGSR RRRSYSRSRS HSRSRSRSRH ENSTTRP00000002413/1-493 SDMKRALEKL DGTEVNGRKI RLVEDKPGSR RRRSYSRSRS HSRSRSRSRH bmy_08025T0/1-459 SDMKRALEKL DGTEVNGRKI RLVEDKPGSR RRRSYSRSRS HSRSRSRSRH BACU003273/1-542 SDMKRALEKL DGTEVNGRKI RLVEDKPGSR RRRSYSRSRS HSRSRSRSRH 201 250 ENSP00000362900/1-494 SRKSRSRSGS SKSSHSKSRS RSRSGSRSRS KSRSRSQSRS RSKKEKSRSP ENSBTAP00000037803/1-493 SRKSRSRSGS SKSSHSKSRS RSRSGSRSRS KSRSRSQSRS RSKKEKSRSP ENSTTRP00000002413/1-493 SRKSRSRSGS SKSSHSKSRS RSRSGSRSRS KSRSRSQSRS RSKKDKSRSP bmy_08025T0/1-459 SRKSRSRSGS SKSSHSKSRS RSRSGSRSRS KSRSRSQSRS RSKKDKSRSP BACU003273/1-542 SRKSRSRSGS SKSSHSKSRS RSRSGSRSRS KSRSRSQSRS RSKKDKSRSP 251 300 ENSP00000362900/1-494 SKEKSRSRSH SAGKSRSKSK DQAEEKIQNN DNVGKPKSRS PSRHKSKSKS ENSBTAP00000037803/1-493 SKDKSRSRSR SADKRRSKSK DPAEEKVQNS DRTGKSKSRS PSRHK--SKS ENSTTRP00000002413/1-493 SKDQSRSRSR SADKRRSKSK DQAEEKVQNS DSTGKSKSRS PSRQKSKSKS bmy_08025T0/1-459 SKDQSRSRSR SADKRRSKSK DQAEEKVQNS DSTGKSKSRS PSRQKSKSKS BACU003273/1-542 SKDQSRSRSR SADKRRSKSK DQAEEKVQNS DSTGKSKSRS PSRQKSKSKS 301 350 ENSP00000362900/1-494 RSRSQERRVE EEKRGSVSRG RSQEKSLRQS RSRSRSKGG- ---------- ENSBTAP00000037803/1-493 RSRSQERGA- EEARGSASRS RSKEKSLRKS RSRSQ--GG- ---------- ENSTTRP00000002413/1-493 RSRSQERGT- QEKRGSVSRS RSQEKSLRKS RSRSRSKGG- ---------- bmy_08025T0/1-459 RSRSQERGA- QEKRGSVSRS RSKEKSLRKS RSRSRSKGG- ---------- BACU003273/1-542 RSRSQERGT- QEKRGSASRS RSKEKSLRKS RSRSRSKGGS RSRSRSRSKS 351 400 ENSP00000362900/1-494 ---------- ---SRSRSRS RSKSKDKRKG RKRSREE--- ---------- ENSBTAP00000037803/1-493 ---------- -----SRSRS RSKSKDKRKG RKRSREE--- ---------- ENSTTRP00000002413/1-493 ---------- -----SRSRS RSKSKDKRKG RKRSREESR- ---------- bmy_08025T0/1-459 ---------- -----SRSRS RSKSKDKRKG RKRSREESR- ---------- BACU003273/1-542 KDKRKGRKRS REESRSRSRS RSKSKDKRKG RKRSREESRS RSRSRSKSKD 401 450 ENSP00000362900/1-494 ---------- -SRSRSRSRS KSERSRKRGS KRDSKAG--- ---SSKKKKK ENSBTAP00000037803/1-493 ---------- -SRSRSRSRS KSERSRKRGG KRDSKSGSGG GSGSSKKKKK ENSTTRP00000002413/1-493 ---------- -SRSRSHSRS KSERSRKRGG KRDSKSG--- ---SSKKKKK bmy_08025T0/1-459 ---------- -SRSRSRSRS KSERSRKRGG KRDSKSG--- ---SSKKKKK BACU003273/1-542 KRKGRKRSRE ESRSRSRSRS KSERSRKRGG KRDSKSGS-- ---SSKKKKK 451 500 ENSP00000362900/1-494 EDTDRSQSRS PSRSVSKERE HAKSESSQRE GRGESENAGT NQETRSRSRS ENSBTAP00000037803/1-493 DDADRSQSRS RSRSGSKERE RAKSESGQRE GRGEGEDAGA NQETRSRSRS ENSTTRP00000002413/1-493 EDADRSQSRS RSRSGSKERE HAKSESGQRE GRGESEDAGA NQETRSRSRS bmy_08025T0/1-459 EDTDRSQSRS RSRSGSKERE HAKSESGQRE GRGESEDAGA NQETRSRSRS BACU003273/1-542 EDTDRSQSRS RSRSGSKERE HAKSESGQRE GRGESEDAGA NQETRSRSRS 501 550 ENSP00000362900/1-494 NSKSKPNLPS ESRSRSKSAS KTRSRSKSRS RSASRSPSRS RSRSHSRS ENSBTAP00000037803/1-493 NSKSKPNLPS ESRSRSKSAS KTRSRSKSRS RSGSRSPSRS RSRSHSRS ENSTTRP00000002413/1-493 NSKSKPNLPS ESRSRSKSAS KTRSRSKSRS RSASRSRSRS RSRSHSRS bmy_08025T0/1-459 NSKSKPNLPS ESRSRSKSAS KTRSRSKSRS RSASRSPSRS RSRSHSRS BACU003273/1-542 NSKSKPNLPS ESRSRSKSAS KTRSRSKSRS RSASRSPSRS RSRSHSRS