KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:47:57 2014 Check: 00 .. Name: ENSP00000357840/1-518 Len: 567 Check: 6 Weight: 1.00 Name: bmy_10363T0/1-525 Len: 567 Check: 5665 Weight: 1.00 Name: ENSTTRP00000013790/1-519 Len: 567 Check: 1381 Weight: 1.00 Name: ENSBTAP00000037814/1-488 Len: 567 Check: 1338 Weight: 1.00 // 1 50 ENSP00000357840/1-518 ---------- ---------- ---------- ---------- --------ML bmy_10363T0/1-525 ---------- ---------- ---------- ---------- MLRWFITVLL ENSTTRP00000013790/1-519 ---------- ---------- ---------- ---------- --------LL ENSBTAP00000037814/1-488 LEPCGAGAPA AGQRLLQAEA PAENEPEAVV GSRRSGRADS MLRWFITVLL 51 100 ENSP00000357840/1-518 CASFLGLGLS VAIVGPTFQD LATNVNRNIS SLSFIFVGRA LGYLSGSVIG bmy_10363T0/1-525 CAAFLGLGMS VAVLGPTFQD LATNVNRNIS SLSLIFVGRA FGYLGGSVIG ENSTTRP00000013790/1-519 CAAFLGLGMS VAILGPTFQD LAANVNRNIS SLSLIFVGRA FGYLGGSVIG ENSBTAP00000037814/1-488 CAAFLGLGMS VAILGPTFQD LATNVNRNIS RLSLIFVGRA FGYLGGSVIG 101 150 ENSP00000357840/1-518 GFLVDVMNYF LLLGISMSAT TVGLYLVPFC KTAILLTVMM SIFGVSIGIL bmy_10363T0/1-525 GVLFDNMNHF LLLGVSMFAT TIGLYLVPFC KTAVLLIVVM SIFGVSVGIL ENSTTRP00000013790/1-519 GVLFDIMNHF LLLGMSMFAT TIGLYLVPFC KTAVLLIVMM SIFGVSVGIL ENSBTAP00000037814/1-488 GVLFDSMNHF LLLGVSMFAT TVGLYLVPFC KTAVLLIVMM STFGVSIGIL 151 200 ENSP00000357840/1-518 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGPTASAEN bmy_10363T0/1-525 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGRMVSAEN ENSTTRP00000013790/1-519 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGRMVSAEN ENSBTAP00000037814/1-488 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGTTVSAEN 201 250 ENSP00000357840/1-518 HTESDF-HPA LNQSSDADSE ALFGVPNDKN LLWAYAVIGT YMFLVSVIFF bmy_10363T0/1-525 HTEADFNHSA FNQSSEADSE SLLGIPDDMN LLWAYAVIGA YIFVVSLFFF ENSTTRP00000013790/1-519 HTEADFNHSA LNQSSEADSE SLLRIPDDMN LLWAYAVIGT YIFVVSLFFF ENSBTAP00000037814/1-488 RTEADFNQSA FNQSSEADSE SLFGIPDDMN LLWAYAVIGT YIFVVALFFF 251 300 ENSP00000357840/1-518 CLFLKNSSKQ EKARASAETF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY bmy_10363T0/1-525 ALFVKKSSRQ EKAKASAQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY ENSTTRP00000013790/1-519 ALFIKKSSRQ DKAKVSTQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY ENSBTAP00000037814/1-488 ALFLKKSSKQ EKARVSAQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY 301 350 ENSP00000357840/1-518 VFSFATTHAG MKESEAAGLN SIFWGTFAAC RGLAIFFATC LQPGTMIVLS bmy_10363T0/1-525 VFSFATSHAG MKESEAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS ENSTTRP00000013790/1-519 VFSFATTHAG MKESEAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS ENSBTAP00000037814/1-488 VFSFATTHAG MKEREAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS 351 400 ENSP00000357840/1-518 NIGSLTSSLF LVLFDKNPIC LWIATSVYGA SMATTFPSGV SWIEQYTTIH bmy_10363T0/1-525 NIGSLASSLF LVLFDKSRVC LWIATSVYGA SMATIFPSGV SWIEQYTTIH ENSTTRP00000013790/1-519 NIGSLASSLF LVLFNKSRVC LWIATSVYGA SMATTFPSGV SWIEQYTTIH ENSBTAP00000037814/1-488 NIGSLTSSLF LVLFNKSPVC LWIATSVYGA SMATTFPSGV SWIEQYTTIH 401 450 ENSP00000357840/1-518 GKSAAFFVIG ASLGEMAIPA VIGILQGKYP DLPVVLYTSL GASIATGILF bmy_10363T0/1-525 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTCL GSSVATAVLF ENSTTRP00000013790/1-519 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTCL GSSVATAVLF ENSBTAP00000037814/1-488 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTSL GSSIATAILF 451 500 ENSP00000357840/1-518 PVLYKLATSP LDRQRKEDRK SEDQKALLSS SGLNEYEEEN EEEDAEKWNE bmy_10363T0/1-525 PVLYKLATLP ISRQQKEHSK SEDQKALLSS SGLNDYEEEN EEEDAEKWNE ENSTTRP00000013790/1-519 PVLYKLATLP ISRQHKEHSK SEDQKALLSS SGLNDCEEEN EEEDAEKWNE ENSBTAP00000037814/1-488 PVLYKLATLP LDRQRKEHRK SEDQKALLSS SGLNDYEE-- ---------- 501 550 ENSP00000357840/1-518 MDFEMIETND TMRHSIIETS RSSLTEPTAE VYNQYPSNAL VFESSPFNTG bmy_10363T0/1-525 MDFEVIEMND TMRNSVIETS RYILMEPTAD VSNQSHSNAL MFESSPVNMG ENSTTRP00000013790/1-519 MDFEVIEMND TVRNSVIETS RYILMEPTAD VSNQSHSNAL MFESSPVNMG ENSBTAP00000037814/1-488 ---------- ---------- ---------- ---------- ---------- 551 600 ENSP00000357840/1-518 SAHVKHLPET RTKGTNV bmy_10363T0/1-525 KSPVNHL--A RNQDKRD ENSTTRP00000013790/1-519 KSPVNHLQET RTKGTKG ENSBTAP00000037814/1-488 ---------- -------