KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 4 Type: P Thu May 15 17:47:57 2014 Check: 00 ..
Name: ENSP00000357840/1-518 Len: 567 Check: 6 Weight: 1.00
Name: bmy_10363T0/1-525 Len: 567 Check: 5665 Weight: 1.00
Name: ENSTTRP00000013790/1-519 Len: 567 Check: 1381 Weight: 1.00
Name: ENSBTAP00000037814/1-488 Len: 567 Check: 1338 Weight: 1.00
//
1 50
ENSP00000357840/1-518 ---------- ---------- ---------- ---------- --------ML
bmy_10363T0/1-525 ---------- ---------- ---------- ---------- MLRWFITVLL
ENSTTRP00000013790/1-519 ---------- ---------- ---------- ---------- --------LL
ENSBTAP00000037814/1-488 LEPCGAGAPA AGQRLLQAEA PAENEPEAVV GSRRSGRADS MLRWFITVLL
51 100
ENSP00000357840/1-518 CASFLGLGLS VAIVGPTFQD LATNVNRNIS SLSFIFVGRA LGYLSGSVIG
bmy_10363T0/1-525 CAAFLGLGMS VAVLGPTFQD LATNVNRNIS SLSLIFVGRA FGYLGGSVIG
ENSTTRP00000013790/1-519 CAAFLGLGMS VAILGPTFQD LAANVNRNIS SLSLIFVGRA FGYLGGSVIG
ENSBTAP00000037814/1-488 CAAFLGLGMS VAILGPTFQD LATNVNRNIS RLSLIFVGRA FGYLGGSVIG
101 150
ENSP00000357840/1-518 GFLVDVMNYF LLLGISMSAT TVGLYLVPFC KTAILLTVMM SIFGVSIGIL
bmy_10363T0/1-525 GVLFDNMNHF LLLGVSMFAT TIGLYLVPFC KTAVLLIVVM SIFGVSVGIL
ENSTTRP00000013790/1-519 GVLFDIMNHF LLLGMSMFAT TIGLYLVPFC KTAVLLIVMM SIFGVSVGIL
ENSBTAP00000037814/1-488 GVLFDSMNHF LLLGVSMFAT TVGLYLVPFC KTAVLLIVMM STFGVSIGIL
151 200
ENSP00000357840/1-518 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGPTASAEN
bmy_10363T0/1-525 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGRMVSAEN
ENSTTRP00000013790/1-519 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGRMVSAEN
ENSBTAP00000037814/1-488 DTGGNVLILA IWGDKGAPHM QALHFSFALG AFLAPLLAKL ALGTTVSAEN
201 250
ENSP00000357840/1-518 HTESDF-HPA LNQSSDADSE ALFGVPNDKN LLWAYAVIGT YMFLVSVIFF
bmy_10363T0/1-525 HTEADFNHSA FNQSSEADSE SLLGIPDDMN LLWAYAVIGA YIFVVSLFFF
ENSTTRP00000013790/1-519 HTEADFNHSA LNQSSEADSE SLLRIPDDMN LLWAYAVIGT YIFVVSLFFF
ENSBTAP00000037814/1-488 RTEADFNQSA FNQSSEADSE SLFGIPDDMN LLWAYAVIGT YIFVVALFFF
251 300
ENSP00000357840/1-518 CLFLKNSSKQ EKARASAETF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY
bmy_10363T0/1-525 ALFVKKSSRQ EKAKASAQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY
ENSTTRP00000013790/1-519 ALFIKKSSRQ DKAKVSTQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY
ENSBTAP00000037814/1-488 ALFLKKSSKQ EKARVSAQRF RRAKYHNALL CLLFLFFFFY VGAEVTYGSY
301 350
ENSP00000357840/1-518 VFSFATTHAG MKESEAAGLN SIFWGTFAAC RGLAIFFATC LQPGTMIVLS
bmy_10363T0/1-525 VFSFATSHAG MKESEAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS
ENSTTRP00000013790/1-519 VFSFATTHAG MKESEAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS
ENSBTAP00000037814/1-488 VFSFATTHAG MKEREAAGLN SIFWGTFAAC RGMAIFFATC LQPGTMIVLS
351 400
ENSP00000357840/1-518 NIGSLTSSLF LVLFDKNPIC LWIATSVYGA SMATTFPSGV SWIEQYTTIH
bmy_10363T0/1-525 NIGSLASSLF LVLFDKSRVC LWIATSVYGA SMATIFPSGV SWIEQYTTIH
ENSTTRP00000013790/1-519 NIGSLASSLF LVLFNKSRVC LWIATSVYGA SMATTFPSGV SWIEQYTTIH
ENSBTAP00000037814/1-488 NIGSLTSSLF LVLFNKSPVC LWIATSVYGA SMATTFPSGV SWIEQYTTIH
401 450
ENSP00000357840/1-518 GKSAAFFVIG ASLGEMAIPA VIGILQGKYP DLPVVLYTSL GASIATGILF
bmy_10363T0/1-525 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTCL GSSVATAVLF
ENSTTRP00000013790/1-519 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTCL GSSVATAVLF
ENSBTAP00000037814/1-488 GKAAAFFVVG AALGEMAIPA VIGILQGKYP DLPVVLYTSL GSSIATAILF
451 500
ENSP00000357840/1-518 PVLYKLATSP LDRQRKEDRK SEDQKALLSS SGLNEYEEEN EEEDAEKWNE
bmy_10363T0/1-525 PVLYKLATLP ISRQQKEHSK SEDQKALLSS SGLNDYEEEN EEEDAEKWNE
ENSTTRP00000013790/1-519 PVLYKLATLP ISRQHKEHSK SEDQKALLSS SGLNDCEEEN EEEDAEKWNE
ENSBTAP00000037814/1-488 PVLYKLATLP LDRQRKEHRK SEDQKALLSS SGLNDYEE-- ----------
501 550
ENSP00000357840/1-518 MDFEMIETND TMRHSIIETS RSSLTEPTAE VYNQYPSNAL VFESSPFNTG
bmy_10363T0/1-525 MDFEVIEMND TMRNSVIETS RYILMEPTAD VSNQSHSNAL MFESSPVNMG
ENSTTRP00000013790/1-519 MDFEVIEMND TVRNSVIETS RYILMEPTAD VSNQSHSNAL MFESSPVNMG
ENSBTAP00000037814/1-488 ---------- ---------- ---------- ---------- ----------
551 600
ENSP00000357840/1-518 SAHVKHLPET RTKGTNV
bmy_10363T0/1-525 KSPVNHL--A RNQDKRD
ENSTTRP00000013790/1-519 KSPVNHLQET RTKGTKG
ENSBTAP00000037814/1-488 ---------- -------