KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:01 2014 Check: 00 .. Name: ENSP00000271064/1-467 Len: 469 Check: 1989 Weight: 1.00 Name: ENSBTAP00000037841/1-469 Len: 469 Check: 12 Weight: 1.00 Name: bmy_14972T0/1-458 Len: 469 Check: 7217 Weight: 1.00 Name: ENSTTRP00000012592/1-452 Len: 469 Check: 9132 Weight: 1.00 Name: BACU003290/1-467 Len: 469 Check: 822 Weight: 1.00 // 1 50 ENSP00000271064/1-467 MWRCPLG--L LLLLPLAGHL ALGAQQGRGR RELAPGLHLR GIRDAGGRYC ENSBTAP00000037841/1-469 MWRRPLGLLL LLLLLLAGEL GVGARRGRRR RELAPALHRR GIRDAGGRYC bmy_14972T0/1-458 MWRCPLG--L LLLLLPAGEL ALGAQRGRGR RELAPALHLR GIRDAGGRYC ENSTTRP00000012592/1-452 MWRCPLG--L LLLL--AGEL ALGAQRGRGR RELAPALHLR GIRDAGGRYC BACU003290/1-467 MWRCPLR--L LLLLLPAGEL ALGAQRGRGR RELAPALHLR GVRDAGGRYC 51 100 ENSP00000271064/1-467 QEQDLCCRGR ADDCALPYLG AICYCDLFCN RTVSDCCPDF WDFCLGVPPP ENSBTAP00000037841/1-469 QEQDLCCRGR ADDCALPYLG VTCYCDLFCN RTVSDCCPDF WDFCLGVPPP bmy_14972T0/1-458 QXQDLCCRGR ADDCALPYLG ATCYCDLFCN RTVSDCCPDF WDFCLGVPPP ENSTTRP00000012592/1-452 QEQDLCCRGR ADDCALPYLG ATCYCDLFCN RTVSDCCPDF WDFCLGVPPP BACU003290/1-467 QEQDLCCRGR ADDCALPYLG ATCYCDLFCN RTVSDCCPDF WDFCLGVPPP 101 150 ENSP00000271064/1-467 FPPIQGCMHG GRIYPVLGTY WDNCNRCTCQ ENRQWQCDQE PCLVDPDMIK ENSBTAP00000037841/1-469 FPPIQGCMHK GRIYPVLGTY WDNCNRCTCH EKERWECDQE PCLVDEDMIE bmy_14972T0/1-458 FPPIQAPPH- --------LF LPSCSSSTCQ EKGQWECDQE PCLVDENMIK ENSTTRP00000012592/1-452 FPPIQGCMHR GRIYPVLGTY WDNCNRCTCQ EKGQWECDQE PCLVDENMIK BACU003290/1-467 FPPIQGCMHR GRIYPVLGTY WDNCNRCTCQ EKGQWECDQE PCLVDENMIK 151 200 ENSP00000271064/1-467 AINQGNYGWQ AGNHSAFWGM TLDEGIRYRL GTIRPSSSVM NMHEIYTVLN ENSBTAP00000037841/1-469 AINHGDYGWR AGNHSAFWGM TLDEGIRYRL GTVRPSSFVA NMNEIHTVLG bmy_14972T0/1-458 AINQGNYGWR AGNHSAFWGM TLDEGIRYRL GTIRPSSSVT NMNEIHTVLS ENSTTRP00000012592/1-452 AINQGNYGWR AGNHSAFWGM TLDEGIRYRL GTIRPSSSVT NMNEIHTVLG BACU003290/1-467 AINQGNYGWR AGNHSAFWGM TLDEGIRYRL GTIRPSSSVT NMNEIHTVLS 201 250 ENSP00000271064/1-467 PGEVLPTAFE ASEKWPNLIH EPLDQGNCAG SWAFSTAAVA SDRVSIHSLG ENSBTAP00000037841/1-469 PGEVLPRTFE ASEKWPNLIH DPLDQGNCAG SWAFSTAAVA SDRVSIHSLG bmy_14972T0/1-458 PGEVLPRAFE ASEKWPNLIH DPLDQGNCAG SWAFSTAAVA SDRVSIHSLG ENSTTRP00000012592/1-452 PGEVLPRAFE ASEKWPNLIH DPLDQGNCAG SWAFSTAAVA SDRVSIHSLG BACU003290/1-467 PGEVLPRAFE ASEKWPNLIH DPLDQGNCAG SWAFSTAAVA SDRVSIHSLG 251 300 ENSP00000271064/1-467 HMTPVLSPQN LLSCDTHQQQ GCRGGRLDGA WWFLRRRGVV SDHCYPFSGR ENSBTAP00000037841/1-469 HMSPVLSPQN LLSCDTHNQQ GCRGGRLDGA WWFLRRRGVV SDHCYPFSGH bmy_14972T0/1-458 HMTPVLSPQN LLSCDTHNQQ GCRGGRLDGA WWFLRRRGVV SDHCYPFSGH ENSTTRP00000012592/1-452 HMTPVLSPQN LLSCDTHNQQ GCRGGRLDGA WWFLRRRGVV SDHCYPFSGH BACU003290/1-467 HMAPVLSPQN LLSCDTHNQQ GCRGGRLDGA WWFLRRRGVV SDHCYPFSGH 301 350 ENSP00000271064/1-467 ERDEAGPAPP CMMHSRAMGR GKRQATAHCP NSYVNNNDIY QVTPVYRLGS ENSBTAP00000037841/1-469 GRDEAVPAPP CMMHSRAMGR GKRQATARCP NSYVHANDIY QVTPAYRLGS bmy_14972T0/1-458 GWDEAGSAPR CMMHSRAMGR GKRQATARCP NSYVHANDIY QVTPAYRLGS ENSTTRP00000012592/1-452 GWDEAGSAPR CMMHS-AMGR GKRQATARCP NSYVHANDIY QVTPAYRLGA BACU003290/1-467 GWDEAGSAPR CMMHSRAMGR GKRQATARCP NSYVHANDIY QVTPAYRLGS 351 400 ENSP00000271064/1-467 NDKEIMKELM ENGPVQALME VHEDFFLYKG GIYSHTPVSL GRPERYRRHG ENSBTAP00000037841/1-469 NEKEIMKELM ENGPVQALME VHEDFFLYQS GIYSHTPVSL GRPERYRRHG bmy_14972T0/1-458 NEKEIMKELM ENGPVQALME VHEDFFLYQS GIYSHTPVSL GRPEQYRHHG ENSTTRP00000012592/1-452 NDMEIMIELM ENG-VQALME VHEDFFLYQS GIYSHTPVSL GRPEQYRHHG BACU003290/1-467 NEKEIMKELM ENGPVQALME VHEDFFLYQS GIYSHTPVSL GRPEQYRHHG 401 450 ENSP00000271064/1-467 THSVKITGWG EETLPDGRTL KYWTAANSWG PAWGERGHFR IVRGVNECDI ENSBTAP00000037841/1-469 THSVKITGWG EETLPDGRTI KYWTAANSWG PAWGERGHFR IVRGANECDI bmy_14972T0/1-458 THSVKITGWG EETLPDGRTL KYWTAANSWG PAWGERGHFR IVRGANECDI ENSTTRP00000012592/1-452 THSVKITGWG EETLPDGRTL KYWTAANSWG PAWGERGHFR IVRGANECDI BACU003290/1-467 THSVKITGWG EETLPDRRTL KYWTAANSWG PAWGERGHFR IVRGANECDI 451 500 ENSP00000271064/1-467 ESFVLGVWGR VGMEDMGHH ENSBTAP00000037841/1-469 ESFVLGVWGR VGMEDMGHH bmy_14972T0/1-458 ESFVLGVWGR VGMEDMGHH ENSTTRP00000012592/1-452 ESFVLGVW-- --------- BACU003290/1-467 ESFVLGVWGR VGMEDRGHH