KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:03 2014 Check: 00 .. Name: ENSP00000358762/1-389 Len: 389 Check: 8753 Weight: 1.00 Name: ENSBTAP00000037931/1-389 Len: 389 Check: 7189 Weight: 1.00 Name: ENSTTRP00000007347/1-389 Len: 389 Check: 1914 Weight: 1.00 Name: bmy_21692T0/1-232 Len: 389 Check: 6331 Weight: 1.00 Name: BACU000537/1-360 Len: 389 Check: 759 Weight: 1.00 // 1 50 ENSP00000358762/1-389 MAASAAETRV FLEVRGQLQS ALLILGEPKE GGMPMNISIM PSSLQMKTPE ENSBTAP00000037931/1-389 MAAVAAEARV FLEVRRRLQS ALLILGDSKE GGLPMAVSVT PSSLRMQSPG ENSTTRP00000007347/1-389 MAAAAAEARV FLEVRRRLQS ALLILGVPDE GGLPMDVCIT PTSLQMKSPG bmy_21692T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU000537/1-360 MAAAAAEARL FLEVRKRLQS ALLILGDPNE GGLPMDVCIT PTSLQMKSPG 51 100 ENSP00000358762/1-389 GCTEIQLPAE VRLVPSSCRG LQFVVGDGLH LRLQTQAKLG TKLISMFNQS ENSBTAP00000037931/1-389 GCTELRLPAG VRLAPSTCRG LQHVPGDGLH LRLHARAESR PELISVFNQS ENSTTRP00000007347/1-389 GCTELWLPAG VRLVPSSCRG LRHVAGDGLH MRLQARAEFC TKLISVFNQS bmy_21692T0/1-232 ---------- ---------- ---------- ---------- ---------- BACU000537/1-360 GCTELWLPAG VRLVPSSCRG LQHVAGDGLH LRLQARAEFC TKPISVFNQS 101 150 ENSP00000358762/1-389 SQTQECCTFY CQSCGEVIIK DRKLLRVLPL PSENWGALVG EWCCHPDPFA ENSBTAP00000037931/1-389 SQDQECCTFY CQSCGEVIIR DRMLLRVLPL PGDNWGALVD EWCCHPDPFA ENSTTRP00000007347/1-389 SQAQECCTFY CQSCGEIIMR NRKLLRVLPL PHENWGALVD EWCCHPNPFA bmy_21692T0/1-232 ---------- ---------- --KLLRLLPL PHENWGALVD EWCCHPNPFA BACU000537/1-360 SQAQECCTFY CQSCGEIIIR NRKLLRLLPL PHENWGALVD EWCCHANPFA 151 200 ENSP00000358762/1-389 NKSLHPQEND CFIGDSFFLV NLRTSLWQQR PELSPVEMCC VSSDNHCKLE ENSBTAP00000037931/1-389 NKPLHPREND CFTGDCFYLV NLKSDLWQPR PEGAPVETHH LSSENHLKLK ENSTTRP00000007347/1-389 NKPLHPQAND CFTGDCFFLV NLRRDLQQPR PEVAPVETGC LSSENHLKMK bmy_21692T0/1-232 NKPLHPQEND CFTGDCFFLV NLRHDLQQPR PEVAPVETRC LSSENHLKMK BACU000537/1-360 NKPLHPQEND CFTGDCFFLV NLRHDLQQPR PAVTPVERRC LSSENHLKMK 201 250 ENSP00000358762/1-389 PKANTKVICK RCKVMLGETV SSETTKFYMT EIIIQSSERS FPIIPRSWFV ENSBTAP00000037931/1-389 PKANTKVICK RCKVMLGETV SSETTKFYMT EIIILPSERN FPIIPRSQFV ENSTTRP00000007347/1-389 PKANTKVICK RCKVMLGETV SLETTKFYMT EIIIQPSERN FPIIPRSQFV bmy_21692T0/1-232 PKANTKVICK RCKVMLGETV SSETTKFYMT EIIIQPSERN FPIIPRSQFV BACU000537/1-360 PKANTKVICK RCKVMLGETV SSETTKFYMT EIIIQPSERN FPIIPRSQFV 251 300 ENSP00000358762/1-389 QSVIAQCLVQ LSSARSTFRF TIQGQDDKVY ILLWLLNSDS LVIESLRNSK ENSBTAP00000037931/1-389 QSVLAQCVVE LSSARSTFRF TIQGHDDKVY ILLWLLNSDS LVIESLGQYT ENSTTRP00000007347/1-389 QSVIAQCLVE LSSARSTFRF TLQGHDGKAY ILLWLLNSDT LVIEALESST bmy_21692T0/1-232 QSVIAQCLME LSSARSTFRF TLQGHDGKVY ILLWLLNSDS LVIEALESST BACU000537/1-360 QSVIAQCLVE LSSARSTFRF TLQGHDGKAY ILLWLLNSDS LVIEALESST 301 350 ENSP00000358762/1-389 YIKKFPLLEN TFKADSSSAW SAVKVLYQPC IKSRNEKLVS LWESDISVHP ENSBTAP00000037931/1-389 NIKKFPVLED VLKPDSNSAC NAVKVLYQPC IKSRNAELSS LWENDLSVHS ENSTTRP00000007347/1-389 SIKKFPLLED LLKADSSSAW NAVKVLYQPC IKGRNAELAS SWESDVSVHC bmy_21692T0/1-232 SIKKFPLLED LLKADSSSAW NAVKVLYQPC IKSRNAD--- -------CQY BACU000537/1-360 SIKKFPLLED LLKADSSSAW NAVKVLYQPC IKSRNXEEVM LWFS------ 351 400 ENSP00000358762/1-389 LTLPSATCLE LLLILSKSNA NLPSSLRRVN SFQVAFLKM ENSBTAP00000037931/1-389 LTLPSTTCLE LLLILSKSNA TLPPSLRCMN SFQVAFLKM ENSTTRP00000007347/1-389 LTLPSATCLE LLLILSRSNA TLPPSLRCMN SFQVAFLKM bmy_21692T0/1-232 LDLSSIHCL- ------HQNK K--------- --------- BACU000537/1-360 ---PSTFVFV SVATLVLRN- ---------- ---------