KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:06 2014 Check: 00 .. Name: ENSBTAP00000037965/1-467 Len: 624 Check: 114 Weight: 1.00 Name: ENSP00000421246/1-589 Len: 624 Check: 4384 Weight: 1.00 Name: BACU016714/1-354 Len: 624 Check: 9902 Weight: 1.00 Name: bmy_08137T0/1-538 Len: 624 Check: 6081 Weight: 1.00 Name: ENSTTRP00000009138/1-556 Len: 624 Check: 8084 Weight: 1.00 // 1 50 ENSBTAP00000037965/1-467 ---------- ---------- ---------- ---------- ---------- ENSP00000421246/1-589 MEAEETMECL QEFPEHHKMI LDRLNEQREQ DRFTDITLIV DGHHFKAHKA BACU016714/1-354 MEAEETMECL QEFPEHHKMI LDRLNEQREQ DRFTDITLIV DGHHFKAHKA bmy_08137T0/1-538 MEAEETMECL QEFPEHHKMI LDRLNEQREQ DRFTDITLIV DGHHFKAHKA ENSTTRP00000009138/1-556 MEAEETMEC- QEFPEHHKMI LDRLNEQREQ DRFTDITLIV DGHHFKAHKA 51 100 ENSBTAP00000037965/1-467 ---------- ---------- ---------- ---------- ---------- ENSP00000421246/1-589 VLAACSKFFY KFFQEFTQEP LVEIEGVSKM AFRHLIEFTY TAKLMIQGEE BACU016714/1-354 VLAACSKFFY KFFQEFTQEP LVEIEGVSKM AFRHLIEFTY TAKLMIQGEE bmy_08137T0/1-538 VLAACSKFFY KFFQEFTQEP LVEIE----- ---------- ---------- ENSTTRP00000009138/1-556 VLAACSKFFY KFFQEFTQEP LVEIEGVSKM AFRHLIEFTY TAKLMIQGEE 101 150 ENSBTAP00000037965/1-467 ---------- ---------- ---RNKENSA PLEENTTGKS EAKKRKIAET ENSP00000421246/1-589 EANDVWKAAE FLQMLEAIKA LEVRNKENSA PLEENTTGKN EAKKRKIAET BACU016714/1-354 EANDVWKAAE FLQMLEAIKA LEVRNKENSA PLEETTTGKS EAKKRKIAET bmy_08137T0/1-538 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009138/1-556 EANDVWKAAE FLQMLEAIKA LEVRNKENSA PLEETTTGKS EAKKRKIAET 151 200 ENSBTAP00000037965/1-467 SNVITESLPS AESEPVEIEV EIAEGTIEVE DEGIETLEEV ASAKQSIKYI ENSP00000421246/1-589 SNVITESLPS AESEPVEIEV EIAEGTIEVE DEGIETLEEV ASAKQSVKYI BACU016714/1-354 SNVITESLPS AESEPVEIEV EIAEGTIEVE DEGIESLEDV AAARQSIKYI bmy_08137T0/1-538 ---------- -ESEPVEIEV EIAEGTIEVE DEGIETLEDV ATARQSIKYI ENSTTRP00000009138/1-556 SNVITESLPS AESEPVEIEV EIAEGTIEVE DEGIETLEDV ATARQSIKYI 201 250 ENSBTAP00000037965/1-467 QSTGSSDDSA LALLADITSK YRQGDRKGQI KDEDGCASDP TSKQ------ ENSP00000421246/1-589 QSTGSSDDSA LALLADITSK YRQGDRKGQI K-EDGCPSDP TSKQ------ BACU016714/1-354 QSTGSSDDSA LALLADITSK YRQGDRKGQI KDEDGCASDP TSKQVEGIEI bmy_08137T0/1-538 QSTGSSDDSA LALLADITSK YRQGDRKGQI KDEDGCASDP TSKQVEGIEI ENSTTRP00000009138/1-556 QSTGSSDDSA LALLADITSK YRQGDRKGQI KDEDGCASDP TSKQVEGIEI 251 300 ENSBTAP00000037965/1-467 ---------- ---------- --------EH MKSHSTESFK CEICNKRYLR ENSP00000421246/1-589 ---------- ---------- --------EH MKSHSTESFK CEICNKRYLR BACU016714/1-354 VELQLSHVKD LFHCEKCNRS FKLFYHFKEH MKSHSTESFK CEICNKRYLR bmy_08137T0/1-538 VELQLSHVKD LFHCEKCNRS FKLFYHFKEH MKSHSTESFK CEICNKRYLR ENSTTRP00000009138/1-556 VELQLSHVKD LFHCEKCNRS FKLFYHFKEH MKSHSTESFK CEICNKRYLR 301 350 ENSBTAP00000037965/1-467 ESAWKQHLSC YHLEEGGVSK KQRTGKKIHI CQYCEKQFDH FGHFKEHLRK ENSP00000421246/1-589 ESAWKQHLNC YHLEEGGVSK KQRTGKKIHV CQYCEKQFDH FGHFKEHLRK BACU016714/1-354 ESAWKQHLNC YHLEEGGVSK KQRTGKKIHI CQYCEKQFDH FGHFKEHLRK bmy_08137T0/1-538 ESAWKQHLNC YHLEEGGVSK KQRTGKKIHI CQYCEKQFDH FGHFKEHLRK ENSTTRP00000009138/1-556 ESAWKQHLNC YHLEEGGVSK KQRTGKKIHI CQYCEKQFDH FGHFKEHLRK 351 400 ENSBTAP00000037965/1-467 HTGEKPFECP NCHERFARNS TLKCHLTACQ TGVGAKKGRK KLYECQVCNS ENSP00000421246/1-589 HTGEKPFECP NCHERFARNS TLKCHLTACQ TGVGAKKGRK KLYECQVCNS BACU016714/1-354 HTGN------ ---------- ---------- ---------- ---------- bmy_08137T0/1-538 HTGEKPFECP NCHERFARNS TLKCHLTACQ TGVGAKKGRK KLYECQVCNS ENSTTRP00000009138/1-556 HTGEKPFECP NCHERFARNS TLKCHLTACQ TGVGAKKGRK KLYECQVCNS 401 450 ENSBTAP00000037965/1-467 VFNSWDQFKD HLVIHTGDKP NHCTLCDLWF MQGNELRRHL SDTHNISERL ENSP00000421246/1-589 VFNSWDQFKD HLVIHTGDKP NHCTLCDLWF MQGNELRRHL SDAHNISERL BACU016714/1-354 ---------- ---------- ---------- ---------- ---------- bmy_08137T0/1-538 VFNSWDQFKD HLVIHTGDKP NHCTLCDLWF MQGNELRRHL SDAHNISERL ENSTTRP00000009138/1-556 VFNSWDQFKD HLVIHTGDKP NHCTLCDLWF MQGNELRRHL SDAHNISERL 451 500 ENSBTAP00000037965/1-467 VTEEVLSVET RVQTEPVTSM TIIEQVGKVH VLPLLQVQVD SAQVTVEQVH ENSP00000421246/1-589 VTEEVLSVET RVQTEPVTSM TIIEQVGKVH VLPLLQVQVD SAQVTVEQVH BACU016714/1-354 ---------- ---------- ---------- ---------- ---------- bmy_08137T0/1-538 VTEEVLSVET RVQTEPVTSM TIIEQVGKVH VLPLLQVQVD SAQVTVEQVH ENSTTRP00000009138/1-556 VTEEVLSVET RVQTEPVTSM TIIEQVGKVH VLPLLQVQVD SAQVTVEQVH 501 550 ENSBTAP00000037965/1-467 PDLLQDSQVH ESHVSELPEQ VQVSYLEVGR IQTEEGTEVH VEELHVERVN ENSP00000421246/1-589 PDLLQDSQVH DSHMSELPEQ VQVSYLEVGR IQTEEGTEVH VEELHVERVN BACU016714/1-354 ---------- ---------- ---------- ---------- ---------- bmy_08137T0/1-538 PDLLQDSQVH DSHMNELPEQ VQVSYLEVGR IQTEEGTEVH VEELHVERVN ENSTTRP00000009138/1-556 PDLLQDSQVH DSHMNELPEQ VQVSYLEVGR IQTEEGTEVH VEELHVERVN 551 600 ENSBTAP00000037965/1-467 QMPVEVQTEL LEADLEQVTP EIMNQEEREP TQADAAEAAI EEHEDAEDLE ENSP00000421246/1-589 QMPVEVQTEL LEADLDHVTP EIMNQEERES SQADAAEAAR EDHEDAEDLE BACU016714/1-354 ---------- ---------- ---------- ---------- ---------- bmy_08137T0/1-538 QMPMEVQTEL LEADLDQVTP EIMNQEEREA TQADAAEAAR EDHEDAEGLE ENSTTRP00000009138/1-556 QMPMEVQ--- ---------- ---------- ---------- ---------- 601 650 ENSBTAP00000037965/1-467 TKSTVDSQAE KAGNENRTPM PVLE ENSP00000421246/1-589 TKPTVDSEAE KAENEDRTAL PVLE BACU016714/1-354 ---------- ---------- ---- bmy_08137T0/1-538 TKSTVDSQAE KSGNENRTPM PVLE ENSTTRP00000009138/1-556 ---------- ---------- ----