KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:18 2014 Check: 00 .. Name: ENSP00000370571/1-528 Len: 664 Check: 9201 Weight: 1.00 Name: ENSBTAP00000038050/1-491 Len: 664 Check: 519 Weight: 1.00 Name: ENSTTRP00000014663/1-507 Len: 664 Check: 3251 Weight: 1.00 Name: bmy_05027T0/1-610 Len: 664 Check: 7188 Weight: 1.00 Name: BACU003594/1-500 Len: 664 Check: 9777 Weight: 1.00 // 1 50 ENSP00000370571/1-528 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038050/1-491 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014663/1-507 ---------- ---------- ---------- ---------- ---------- bmy_05027T0/1-610 MQLDLMGQSP FSCVSVLLAH PTSLRRQQEG DAEEVGGRRW KTQRGFDVSS BACU003594/1-500 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000370571/1-528 ---------- ---------- MPTPDATTPQ AKGFRRAVSE LDAKQAEAIM ENSBTAP00000038050/1-491 ---------- ---------- MPTPNAASPQ AKGFRRAVSE LDAKQAEAIM ENSTTRP00000014663/1-507 ---------- ---------- MPTPNAASPQ AKGFRRAVSE LDAKQAEAIM bmy_05027T0/1-610 AYKRPPGRGL WRRSPDLAGI MPTPNAASPQ AKGFRRAVSE LDAKQAEAIM BACU003594/1-500 ---------- ---------- MPTPNAASPQ AKGFRRAVSE LDAKQAEAIM 101 150 ENSP00000370571/1-528 VRGQGAPGPS LTGSPWPGTA APAASYTPTP RSPRFIGRRQ SLIEDARKER ENSBTAP00000038050/1-491 ---------- ---------- ---------- -SPRFVGRRQ SLIQDARKER ENSTTRP00000014663/1-507 VR-------- ---------- QGLALSTPPA VSPRFVGRRQ SLIQDARNER bmy_05027T0/1-610 ---------- ---------- ---------- -SPRFVGRRQ SLIQDARKER BACU003594/1-500 ---------- ---------- ---------- -SPRFVGRRQ SLIQDARKER 151 200 ENSP00000370571/1-528 EAAV----AA AAAAVPSEPG DPLEAVAFEE KEGKAVLNLL FSPRATKPSA ENSBTAP00000038050/1-491 EKAE------ -AAASSSESA ---EAGSLVE RDGKAVLTLL FALRPTKPPA ENSTTRP00000014663/1-507 QKAEAAAAAA AAAAAAAEPG ---EA--LGG RAGKAALNLL FTLRATKPPA bmy_05027T0/1-610 EKAE------ -AAAAAAEPG ---EA--LEE RDGKAVLNLL FTLRATKPPA BACU003594/1-500 EKAE------ -AAAAAAEPG ---EA--LEE RDGKAVVNLL FTLRATKPPA 201 250 ENSP00000370571/1-528 L--------- --SRAVKVFE TFEAKIHHLE TRPAQRPRAG GPHLEYFVRL ENSBTAP00000038050/1-491 L--------- --TRAIKVFE TFEAHLHHLE TRPAQPLRAG SPPLECFVRC ENSTTRP00000014663/1-507 L--------- --SRAVKVFE TFEAQIHHLE TRPAQKPQAG GPHLEYFVRC bmy_05027T0/1-610 L--------- --SRAMKVFE TFEAQIHHLE TRPAQKPRAG GPHLEYFLRC BACU003594/1-500 LSRAVTTQPP ARSRAVKVFE TFEAQIHHLE TRPAQKPRAG GPHLEYFLRC 251 300 ENSP00000370571/1-528 EVRRGDLAAL LSGVRQVSED VRSPAGPK-- ---------- ---------V ENSBTAP00000038050/1-491 EVPGPVVPAL LSALRRVAED VRAAGESK-- ---------- ---------V ENSTTRP00000014663/1-507 EVPSAALPTL LSSLRRVAED VRGAGENK-- ---------- ---------V bmy_05027T0/1-610 EVPSAALPTL LSSLRRVAED VRGAGENKGG PSHHSPTPNP VLLPSFLREV BACU003594/1-500 EVPSAALPTL LSSLRRVAED VRGAGENK-- ---------- ---------V 301 350 ENSP00000370571/1-528 PWFPRKVSEL DKCHHLVTKF DPDLDLDHPG FSDQVYRQRR KLIAEIAFQY ENSBTAP00000038050/1-491 LWFPRKVSEL DKCHHLVTKF DPDLDLDHPG FSDQAYRQRR KLIAEIAFQY ENSTTRP00000014663/1-507 LWFPRKVSEL DKCHHLVTKF DPDLDLDHPG FSDQVYRQRR KLIAEIAFQY bmy_05027T0/1-610 LWFPRKVSEL DKCHHLVTKF DPDLDLDHPG FSDQVYRQRR KLIAEIAFQY BACU003594/1-500 LWFPRKVSEL DKCHHLVTKF DPDLDLDHPG FSDQVYRQRR KLIAEIAFQY 351 400 ENSP00000370571/1-528 RHGDPIPRVE YTAEEIATWK EVYTTLKGLY ATHACGEHLE AFALLERFSG ENSBTAP00000038050/1-491 KQGDPIPHVE YTAEETATWK EVYSTLRGLY PTHACREHLE AFELLERFCG ENSTTRP00000014663/1-507 KQGDPIPHVE YTAEETATWK EVYTTLRGLY ATHACREHLE AFELLEHFCG bmy_05027T0/1-610 KQGDPIPHVE YTAEETATWK EVYTTLRGLY ATHACREHLE AFELLEHFCG BACU003594/1-500 KQGDPIPHVE YTAEETATWK EVYTTLRGLY ATHACREHLE AFELLEHFCG 401 450 ENSP00000370571/1-528 YREDNIPQLE DVSRFLK--- ---------- ---------- -------ERT ENSBTAP00000038050/1-491 YREDRIPQLE DVSRFLK--- ---------- ---------- -------ERT ENSTTRP00000014663/1-507 YREDSIPQLE DVSRFLK--- ---------- ---------- -------ERT bmy_05027T0/1-610 YREDSIPQLE DVSRFLKGAT PWRPRREGLG WPADGPTRAD RPPAALAERT BACU003594/1-500 YREDSIPQLE DVSRFLK--- ---------- ---------- -------ERT 451 500 ENSP00000370571/1-528 GFQLRPVAGL LSARDFLASL AFRVFQCTQY IRHASSPMHS PEPDCCHELL ENSBTAP00000038050/1-491 GFQLRPVAGL LSARDFLASL AFRVFQCTQY IRHASSPMHS PEPDCCHELL ENSTTRP00000014663/1-507 GFQLRPVAGL LSARDFLASL AFRVFQCTQY IRHASSPMHS PELDCCHELL bmy_05027T0/1-610 GFQLRPVAGL LSARDFLASL AFRVFQCTQY IRHASSPMHS PEPDCCHELL BACU003594/1-500 GFQLRPVAGL LSARDFLASL AFRVFQCTQY IRHASSPMHS PEPDCCHELL 501 550 ENSP00000370571/1-528 GHVPMLADRT FAQFSQDIGL ASLGASDEEI EKLSTLYWFT VEFGLCKQNG ENSBTAP00000038050/1-491 GHVPMLADRT FAQFSQDIGL ASLGVSDEEI EKLSTLYWFT VEFGLCKQNG ENSTTRP00000014663/1-507 RHVPMLPDRT FAQFSQDIGL ASLGASDEEI EKLSTLYWFT VEFGLCKQNG bmy_05027T0/1-610 GHVPMLADRT FAQFSQDIGL ASLGASDEEI EKLSTLYWFT VEFGLCKQNG BACU003594/1-500 GHVPMLADRT FAQFSQDIGL ASLGASDEEI EKLSTLYWFT VEFGLCKQNG 551 600 ENSP00000370571/1-528 EVKAYGAGLL SSYGELLHCL SEEPEIRAFD PEAAAVQPYQ DQTYQSVYFV ENSBTAP00000038050/1-491 EVKAYGAGLL SSYGELLHSL SEEPEIRAFD PDAAAVQPYQ DQTYQPVYFV ENSTTRP00000014663/1-507 EVKAYGAGLL SSYGELLHSL SEEPEIRAFD PDAAAMQPYQ DQTYQPVYFV bmy_05027T0/1-610 EVKAYGAGLL SSYGELLHSL SEEPEIRAFD PDAAAVQPYQ DQTYQPVYFV BACU003594/1-500 EVKAYGAGLL SSYGELLHSL SEGPEIRAFD PDAAAVQPYQ DQTYQPVYFV 601 650 ENSP00000370571/1-528 SESFSDAKDK LRSYASRIQR PFSVKFDPYT LAIDVLDSPQ AVRRSLEGVQ ENSBTAP00000038050/1-491 SESFSDAKDK LRSYASRIQR PFSVKFDPYT LAIDVLDSPH AIRRALDGVQ ENSTTRP00000014663/1-507 SESFSDAKDK LRSYASRIQR PFSVKFDPYT LAIDVLDSPH AIRRALDGVR bmy_05027T0/1-610 SESFSDAKDK LRSYASRIQR PFSVKFDPYT LAIDVLDSPH AIRRALDGVR BACU003594/1-500 SESFSDAKDK LRSYASRIQR PFSVKFDPYT LAIDVLDSPH AIRRALDGVR 651 700 ENSP00000370571/1-528 DELDTLAHAL SAIG ENSBTAP00000038050/1-491 DEMQALAHAL NAIS ENSTTRP00000014663/1-507 DELHALTHAL SA-- bmy_05027T0/1-610 DELHTLTHAL SAIS BACU003594/1-500 DELHTLTHAL SAIS