KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:48:20 2014 Check: 00 .. Name: ENSP00000363533/1-518 Len: 522 Check: 9343 Weight: 1.00 Name: ENSBTAP00000038086/1-473 Len: 522 Check: 8892 Weight: 1.00 Name: bmy_01673T0/1-505 Len: 522 Check: 4380 Weight: 1.00 Name: ENSTTRP00000009311/1-522 Len: 522 Check: 9180 Weight: 1.00 // 1 50 ENSP00000363533/1-518 MAKFVIAGRA DCPYYAKTEL VADYLQKNLP DFRIHKITQR PEVWEDWLKD ENSBTAP00000038086/1-473 MAKFVLAGRA DCPYYAKAEL LADYLQKNLP DFRIHKITQH PDIWEEWLKD bmy_01673T0/1-505 MAKFVLAGRA DCPYYAKAEL LADYLQKNLP DFRIHKIIQH PDVWEEWLKE ENSTTRP00000009311/1-522 MAKFVLAGRA DCPYYAKAEL LADLLQKNLP DFRIHKITQH PDVWEEWLKE 51 100 ENSP00000363533/1-518 VCEKNKWSHK NSPIIWRELL DRGGKGLLLG GYNEFLEHAQ LYYDVTSSMT ENSBTAP00000038086/1-473 LCKKNRWSHN KSPIIWRELL DRGGKGLLLG GYNEFLEHAQ LYYGVTSSMT bmy_01673T0/1-505 LCKKNKWSHK TSPIIWRELL DRGGKGLLLG GYNEFLEHAQ LYYGVTSSMT ENSTTRP00000009311/1-522 LCKKNKWSHK NSPIIWRELL DRGGKGLLLG GYNEFLEHAQ LYYGVTSSMT 101 150 ENSP00000363533/1-518 TELMMVIAQE NLGAHIEKEQ EEEALKTCIN PLQVWITSAS APACYNLIPI ENSBTAP00000038086/1-473 TELMKRVAQE NLGTHIEKEL EKESLKGLVN PLQVWITSAS SLACYHLIPI bmy_01673T0/1-505 TELMKTVAQE NLGTHIEKEL EKEALKGLIN PLQVWITSAS APACYNLIPI ENSTTRP00000009311/1-522 TELMKTVAQE NLGAHIEKEL EEEALKGLIN PLQVWITSAS APACYNLIPI 151 200 ENSP00000363533/1-518 LTSGEVFGMH TEISITLFDN KQAEEHLKSL VVETQDLASP VLRSVSICTK ENSBTAP00000038086/1-473 LTSGEVFGPQ MEISINLFDN KHTEEKLISH KQEAEDLASP CLQSVSICTQ bmy_01673T0/1-505 LTSGEVFGPH MEISINLFDN KQAEEKLTSL VKEAQDLASP FLQSVSVCTR ENSTTRP00000009311/1-522 LTSGEVFGPH MEISINLFDN KQAEEKLTSL VKEAQDLASP FLRSVSLCTQ 201 250 ENSP00000363533/1-518 VEEAFRQAHV IVVLDDSTNK EVFTLEDCLR SRVPLCRLYG YLIEKNAHES ENSBTAP00000038086/1-473 AEEAFHGAHV IIILDDHVDK EINSLEDCIR SRAPLCQLYG SLIEKNAHNF bmy_01673T0/1-505 AEEAFRQAHV IIFLDDHVDK EVYSLEDCIR SRATLCHLYG SLIEKNAHDS ENSTTRP00000009311/1-522 AEEAFRQAHV IIFLDDHVDK EVYSLEDCIR SRATLCHLYG SLIEKNAHDS 251 300 ENSP00000363533/1-518 VRVIVGGRTF VNLKTVLLMR YAPRIAHNII AVALGVEGEA KAILARKLKT ENSBTAP00000038086/1-473 AKIIVGGKTF VNLKTALLMK YAPTFAHNII AVALGVEGQA KAALARKLKI bmy_01673T0/1-505 VRIIVGGKTF VNLKTSLLMR YAPNFAHNIV AVALGVEGKA KAELARKLKT ENSTTRP00000009311/1-522 VRIIVGGKTF VNLKTSLLMR YAPNFAHNII AVALGVEGKA KAELARKLKT 301 350 ENSP00000363533/1-518 APSYIKDVII WGNISGNNYV DLRKTRVYRY ESAIWGPLHY SRPVLNLIFD ENSBTAP00000038086/1-473 TPSCIKDVII WGNISGNNYV DLRKAKVYRY ESAIWGPPHY SRPVLSLLFD bmy_01673T0/1-505 TPSCIKDVII WGNISGNNYV DLRKAKVYRY ESAVWGPPHY SRPVLSLIFD ENSTTRP00000009311/1-522 TPSXXXXVII WGNISGNNIS DLRKAKVYRY ESAVWGPPHY SRPVLSLIFD 351 400 ENSP00000363533/1-518 SEWVKREFVA ILKNLTTTGR QFGGILAAHS IATTLKYWYH GSPPGEIVSL ENSBTAP00000038086/1-473 REWVNREFVV SLKTLTATGR QFGGMLAAHS IATTLKYWCH GSPPGEIVSL bmy_01673T0/1-505 SEWVNREFVV SLKKFTATGR QFGGILAAHS IATTLKYWYH GSPPGEIVSL ENSTTRP00000009311/1-522 SEWVNREFVE SLKKFTATGR QFGGILAAHS IATTLKYWYH GSPPGEIVSL 401 450 ENSP00000363533/1-518 GILSEGQFGI PKGIVFSMPV KFENGTWVVL TDLKDVEISE QIMTRMTSDL ENSBTAP00000038086/1-473 GVLSEGQFGI PKGIVFSMPV KFENGTWVVL TDLKNTEISQ QVMTRMANDL bmy_01673T0/1-505 GVLSEGQFGI PEGIVFSMPV KFENGTWVVL TDLEDIEISE QIMTRMTSDL ENSTTRP00000009311/1-522 GVLSEGQFGI PEGIVFSMPV KFENGTWVVL TDLEDIEISE KIMTRMTSDL 451 500 ENSP00000363533/1-518 IQEKLVALGD KIHFQPYQSG HK----DLVP DEEKNLAMSD AAEFPNQIPQ ENSBTAP00000038086/1-473 IQEQLVALGE LANFQPYQSE ---------- ----NLI--- ---------- bmy_01673T0/1-505 IQEKLVALGE LIHFQPYQSE -T----DLAK EDEKTTL--- ---------P ENSTTRP00000009311/1-522 XXEKLVALGE LINFQPYQSE YKALFSGLMP DDEKDLILSD AVDFLDLIPQ 501 550 ENSP00000363533/1-518 TTFEKPQSLE FLNEFEGKTV ES ENSBTAP00000038086/1-473 ---------- ---------- -- bmy_01673T0/1-505 TTNDNREHWK VSDDSEGKTM EQ ENSTTRP00000009311/1-522 TSSEKSQSQE HTHDSEDKTM EE