KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:48:21 2014 Check: 00 .. Name: bmy_20701T0/1-357 Len: 479 Check: 5929 Weight: 1.00 Name: ENSP00000370990/1-292 Len: 479 Check: 5906 Weight: 1.00 Name: ENSBTAP00000038094/1-306 Len: 479 Check: 9752 Weight: 1.00 Name: BACU005071/1-439 Len: 479 Check: 9632 Weight: 1.00 // 1 50 bmy_20701T0/1-357 MEELTAFVSK SFDQKSKE-S GG--GGGGGG KKDSITYREV LESGLARSRE ENSP00000370990/1-292 MEELTAFVSK SFDQKSKDGN GG--GGGGGG KKDSITYREV LESGLARSRE ENSBTAP00000038094/1-306 MEELTAFVSK SFDQKSKDGS GGGSGGGGGG KKESITYREV LESGLARSRE BACU005071/1-439 MEELTAFVSK SFDQNSKESS GG--GGGGGG KKDSITYREV LESGLARSRE 51 100 bmy_20701T0/1-357 LGVSESNLQD ITEGSGHCPV HLFKDHADHD KDKLKEFGSG RAAEG-EDC- ENSP00000370990/1-292 LGTSDSSLQD ITEGGGHCPV HLFKDHVDND KEKLKEFGTA RVAEGIYECK ENSBTAP00000038094/1-306 LGVSESNLHD ITEAGGHCPV HLFKDHVDTE KDKLKEFGSG RAAEGIYDCK BACU005071/1-439 LGVSESNLQD ITEGSGHCPV HLFKDHADHD KDKLKEFGSG RAAEGIYDCK 101 150 bmy_20701T0/1-357 ---------- ---------- ---------- ---------- ---------- ENSP00000370990/1-292 EKREDVKSED EDGQTKLKQR RSRTNFTLEQ LNELERLFDE THYPDAFMRE ENSBTAP00000038094/1-306 DKRDDVKSED EDGQTKLKQR RSRTNFTLEQ LNELERLFDE THYPDAFMRE BACU005071/1-439 EKREDVKSED EDGQTKLKQR RSRTNFTLEQ LNELERLFDE THYPDAFMRE 151 200 bmy_20701T0/1-357 ---------- SQLQVWFQNR RAKCRKQENQ MHKEMXAKHI RNEGNRTARL ENSP00000370990/1-292 ELSQRLGLSE ARVQVWFQNR RAKCRKQENQ MHKGV----- ---------I ENSBTAP00000038094/1-306 ELSQRLGLSE ARVQVWFQNR RAKCRKQENQ MHNSV----- ---------I BACU005071/1-439 ELSQRLGLSE ARVQVWFQNR RAKCRKQENQ MHKGV----- ---------I 201 250 bmy_20701T0/1-357 RKITDGLEFC GRQGRASPGT GKSSECXLPL LPCHQSADIY RARSDEGSNS ENSP00000370990/1-292 LGTANHLDAC RVAPYVNMGA LR-------- MPFQ------ ------QVQA ENSBTAP00000038094/1-306 LGTASHLDAC RVAPYVNMGA LR-------- MPFQQVARPD CAALPPQVQA BACU005071/1-439 LGTASHLDAC RVAPYVNMGA LR-------- MPFQ------ ------QVQA 251 300 bmy_20701T0/1-357 SVLRERAAET PWTGAQHSST PSPILVFEVN SNPALLTQTV SAELGAGVEV ENSP00000370990/1-292 QLQLEGVAHA HPHLHPHLAA HAPYLMFP-- --PPPFGLPI ASLAESASAA ENSBTAP00000038094/1-306 QLQLEGVAHA HPHLHPHLAA HAPYLMFP-- --PPPFGLPI ASLAESASAA BACU005071/1-439 QLQLEGVAHA HPHLHPHLAA HAPYLMFP-- --PPPFGLPI ASLAESASAA 301 350 bmy_20701T0/1-357 GTSLNFGGPD IQGKSIQDEL ACINEALKAV HK-------- ---------- ENSP00000370990/1-292 AVVAAAAKSN SKNSSIADLR LKARKHAEAL GL-------- ---------- ENSBTAP00000038094/1-306 AVVAAAAKSN SKNSSIADLR LKARKHAEAL GL-------- ---------- BACU005071/1-439 AVVAAAAKSS SKNSSIADLR LKARKHAEAL GXXXXXXXXX XXXXXXXXXX 351 400 bmy_20701T0/1-357 ---------- ---------- TALSPTVQLW PRLVHALSPT KFRHLGHZLL ENSP00000370990/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038094/1-306 ---------- ---------- ---------- ---------- ---------- BACU005071/1-439 XXXXXXXXXX XXXXXXRAAS CTRPLRAPRR PRGRPGARAQ RLPRLGQPRG 401 450 bmy_20701T0/1-357 EALLLSLYLD EMLQLRVNRA QTC------- ---------- --CGGRVSVP ENSP00000370990/1-292 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038094/1-306 ---------- ---------- ---------- ---------- ---------- BACU005071/1-439 PLAGLGRGRP RTARPRQSLA ETVRKRGEVT VRPPKSALDH AGCASWDPGA 451 500 bmy_20701T0/1-357 PLGKKHGALS PTDSCDEQVS SPIIGDAVA ENSP00000370990/1-292 ---------- ---------- --------- ENSBTAP00000038094/1-306 ---------- ---------- --------- BACU005071/1-439 TWSPAALRPS PLPAFPPCAC GLLHAFPRS