KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:37 2014 Check: 00 .. Name: bmy_17251T0/1-231 Len: 551 Check: 2485 Weight: 1.00 Name: ENSP00000307900/1-373 Len: 551 Check: 3084 Weight: 1.00 Name: BACU005790/1-546 Len: 551 Check: 4325 Weight: 1.00 Name: ENSTTRP00000010214/1-373 Len: 551 Check: 9242 Weight: 1.00 Name: ENSBTAP00000038301/1-373 Len: 551 Check: 9657 Weight: 1.00 // 1 50 bmy_17251T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSP00000307900/1-373 ---------- ---------- ---------- ---------- ---------- BACU005790/1-546 MEWSPAGASL SSSAEAGPGA VVAVSRLRGG EGLAALKVDY PNHPGGGKWG ENSTTRP00000010214/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038301/1-373 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_17251T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSP00000307900/1-373 ---------- ---------- ---------- ---------- ---------- BACU005790/1-546 SSPGRKSVKK TTNEDDDLES RSSGSLSNCF GFVAYSVNAR EKPRVKIETL ENSTTRP00000010214/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038301/1-373 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_17251T0/1-231 ---------- ---------- ---------- ---------- ---------- ENSP00000307900/1-373 ---------- ---------- ---------- ---------- ---------- BACU005790/1-546 THQPSHSCSS RSDPDRSPTP SPSPSPSPSP RKLRCLDQRE PETHERRERC ENSTTRP00000010214/1-373 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000038301/1-373 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_17251T0/1-231 ---------- ---------- ---MATSASS HLNKGIKQVY MSLPQGEKVQ ENSP00000307900/1-373 ---------- ---------- ---MTTSASS HLNKGIKQVY MSLPQGEKVQ BACU005790/1-546 SKRRKAKESI DTVDLMWLGT PSTMATSASS HLNKGIKQVY MSLPQGEKVQ ENSTTRP00000010214/1-373 ---------- ---------- ---MATSASS HLNKGIKQVY MSLPQGEKVQ ENSBTAP00000038301/1-373 ---------- ---------- ---MATSASS HLNKGIKQVY MALPQGDKVQ 201 250 bmy_17251T0/1-231 AMYIWIDGTG EGLRCKTRTL DCEPKCIEEL PEWNFDGSST FQSEGSNSDM ENSP00000307900/1-373 AMYIWIDGTG EGLRCKTRTL DSEPKCVEEL PEWNFDGSST LQSEGSNSDM BACU005790/1-546 AMYIWIDGTG EGLRCKTRTL DCEPKCIEEL PEWNFDGSST FQSEGSNSDV ENSTTRP00000010214/1-373 AMYIWIDGTG EGLRCKTRTL DCEPKCIEEL PEWNFDGSST FQSEGSNSDM ENSBTAP00000038301/1-373 AMYIWIDGTG EGLRCKTRTL DSEPKCIEEL PEWNFDGSST FQSEGSNSDM 251 300 bmy_17251T0/1-231 YLVPAAMFRD PFRKDPNKLV FCEVFKYNRK PAGVYRIETN LRHTCKRIMD ENSP00000307900/1-373 YLVPAAMFRD PFRKDPNKLV LCEVFKYNRR PA-----ETN LRHTCKRIMD BACU005790/1-546 YLVPAAMFRD PFRKDPNKLV FCEVFKYNRK PA-----ETN LRHTCKRIMD ENSTTRP00000010214/1-373 YLVPAAMFRD PFRKDPNKLV FCEVFKYNRK PA-----ETN LRHTCKRIMD ENSBTAP00000038301/1-373 YLVPAAMFRD PFRKDPNKLV FCEVFKYNRK PA-----ETN LRHTCKRIMD 301 350 bmy_17251T0/1-231 MVSNQCPWFG MEQEYTLMGT DGHPFGWPSN GFPGPQGPYY CGVGADKAYG ENSP00000307900/1-373 MVSNQHPWFG MEQEYTLMGT DGHPFGWPSN GFPGPQGPYY CGVGADRAYG BACU005790/1-546 MVSNQRPWFG MEQEYTLMGT DGHPFGWPSN GFPGPQGPYY CGVGADKAYG ENSTTRP00000010214/1-373 MVSNQRPWFG MEQEYTLMGT DGHPFGWPSN GFPGPQGPYY CGVGADKAYG ENSBTAP00000038301/1-373 MVSNQRPWFG MEQEYTLMGT DGHPFGWPSN GFPGPQGPYY CGVGADKAYG 351 400 bmy_17251T0/1-231 RDIVEAHYRA CLYAGIKIGG TNAEVMPAQ- ---------- ---------- ENSP00000307900/1-373 RDIVEAHYRA CLYAGVKIAG TNAEVMPAQW EFQIGPCEGI SMGDHLWVAR BACU005790/1-546 RDIVEAHYRA CLYAGIKIGG TNAEVMPAQW EFQIGPCEGI DMGDHLWVAR ENSTTRP00000010214/1-373 RDIVEAHYRA CLYAGIKIGG TNAEVMPAQW EFQIGPCEGI DMGDHLWVAR ENSBTAP00000038301/1-373 RDIVEAHYRA CLYAGIKIGG TNAEVMPAQW EFQIGPCEGI DMGDHLWVAR 401 450 bmy_17251T0/1-231 ---------- -VIA------ ---------- ---------- ----LALCKE ENSP00000307900/1-373 FILHRVCEDF GVIATFDPKP IPGNWNGAGC HTNFSTKAMR EENGLKYIEE BACU005790/1-546 FILHRVCEDF GVIATFDPKP IPGNWNGAGC HTNFSTKAMR EENGLKYIEE ENSTTRP00000010214/1-373 FILHRVCEDF GVIATFDPKP IPGNWNGAGC HTNFSTKAMR EENGLKYIEE ENSBTAP00000038301/1-373 FILHRVCEDF GVIATFDPKP IPGNWNGAGC HTNFSTKAMR EENGLKYIEE 451 500 bmy_17251T0/1-231 AYEHFGREH- ---------- ---------- ---------- ---------- ENSP00000307900/1-373 AIEKLSKRHQ YHIRAYDPKG GLDNARRLTG FHETSNINDF SAGVANRSAS BACU005790/1-546 AIEKLSKRHQ YHIRAYDPKG GLDNARRLTG FHETSNINDF SAGVANRGAS ENSTTRP00000010214/1-373 AIEKLSKRHQ YHIRAYDPKG GLDNARRLTG FHETSNINDF SAGVANRGAS ENSBTAP00000038301/1-373 AIEKLSKRHQ YHIRAYDPKG GLDNARRLTG FHETSNINDF SAGVANRGAS 501 550 bmy_17251T0/1-231 ---------- ---------- ---------- --------LR QSQRE----- ENSP00000307900/1-373 IRIPRTVGQE KKGYFEDRRP SANCDPFSVT EALIRTCLLN ETGDEPFQYK BACU005790/1-546 IRIPRTVGQE KKGYFEDRRP SANCDPFAVT EALIRTCLLN ETGDEPFQYK ENSTTRP00000010214/1-373 IRIPRTVGQE KKGYFEDRRP SANCDPFAVT EALIRTCLLN ETGDEPFQYK ENSBTAP00000038301/1-373 IRIPRTVGQE KKGYFEDRRP SANCDPFAVT EALIRTCLLN ETGDEPFQYK 551 600 bmy_17251T0/1-231 - ENSP00000307900/1-373 N BACU005790/1-546 N ENSTTRP00000010214/1-373 N ENSBTAP00000038301/1-373 N