KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:48:38 2014 Check: 00 .. Name: ENSP00000412064/1-148 Len: 185 Check: 1934 Weight: 1.00 Name: ENSBTAP00000038327/1-141 Len: 185 Check: 4942 Weight: 1.00 Name: bmy_04686T0/1-156 Len: 185 Check: 4586 Weight: 1.00 Name: BACU007964/1-142 Len: 185 Check: 6801 Weight: 1.00 // 1 50 ENSP00000412064/1-148 ---------- ---------- ---------- -------MWN PNAGQPGPNP ENSBTAP00000038327/1-141 ---------- ---------- ---------- -------MWN PNAGQPGPYP bmy_04686T0/1-156 VEAERRSPRK QRCRGDGTSG FLSFLLFPFL GWRKYLNMWN PNAGQPGPYP BACU007964/1-142 ---------- ---------- ---------- -------MWN PNAGQPGPYP 51 100 ENSP00000412064/1-148 YPPNIGCPGG SNPAHPPPIN PPFPPGPCPP PPGAPHGNPA FPPGGPPHPV ENSBTAP00000038327/1-141 HPPNAGYPGG CNPAHPPPAN PPFPPGPFPT PPGAPQGNPA FPPGGPCHPV bmy_04686T0/1-156 HPPNVGYPGG CNPAHPPPAT PTFPPGPFPT PPGAPQGNPA FPPGGPCHPV BACU007964/1-142 HPPNIGCPGG CNPAHPPPAA PTFPPGPFPT PPGAPQGNPA FPPGGPCHPV 101 150 ENSP00000412064/1-148 PQPGYPGCQP LGPYPPPYPP PAPGIPPVNP LAPGMVGPAV IVDKKMQKKM ENSBTAP00000038327/1-141 PQPGYPGCQP SGPYPPPYPP PGPGMCPVNP LVPGIVGPGI VIDKKVHKKM bmy_04686T0/1-156 PQPGYPGCQP SGPYPPPYPP PAPGMCPVNP LAPGMVGPGM VIDKKMQKKM BACU007964/1-142 PQPGYPGCQP SGPYPPPYPP PAPGMCPVTP WAPGMVGPGM VIDKKMQKKM 151 200 ENSP00000412064/1-148 KKAHKKMHKH QKHHKYHKHG KHSSSSSSSS SSDSD ENSBTAP00000038327/1-141 KKAHKKKQKH ------HKHG KH-SSSSSSS SSDSD bmy_04686T0/1-156 KKAHKK---- ---------- ---------- ----- BACU007964/1-142 KKAHKKKQKH ------HRHG KHSSSSSSSS SSDSD