KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 17:48:38 2014  Check: 00 ..

 Name: ENSP00000412064/1-148     Len:    185  Check:  1934  Weight:  1.00
 Name: ENSBTAP00000038327/1-141  Len:    185  Check:  4942  Weight:  1.00
 Name: bmy_04686T0/1-156         Len:    185  Check:  4586  Weight:  1.00
 Name: BACU007964/1-142          Len:    185  Check:  6801  Weight:  1.00

//


                          1                                                   50
ENSP00000412064/1-148     ---------- ---------- ---------- -------MWN PNAGQPGPNP 
ENSBTAP00000038327/1-141  ---------- ---------- ---------- -------MWN PNAGQPGPYP 
bmy_04686T0/1-156         VEAERRSPRK QRCRGDGTSG FLSFLLFPFL GWRKYLNMWN PNAGQPGPYP 
BACU007964/1-142          ---------- ---------- ---------- -------MWN PNAGQPGPYP 


                          51                                                 100
ENSP00000412064/1-148     YPPNIGCPGG SNPAHPPPIN PPFPPGPCPP PPGAPHGNPA FPPGGPPHPV 
ENSBTAP00000038327/1-141  HPPNAGYPGG CNPAHPPPAN PPFPPGPFPT PPGAPQGNPA FPPGGPCHPV 
bmy_04686T0/1-156         HPPNVGYPGG CNPAHPPPAT PTFPPGPFPT PPGAPQGNPA FPPGGPCHPV 
BACU007964/1-142          HPPNIGCPGG CNPAHPPPAA PTFPPGPFPT PPGAPQGNPA FPPGGPCHPV 


                          101                                                150
ENSP00000412064/1-148     PQPGYPGCQP LGPYPPPYPP PAPGIPPVNP LAPGMVGPAV IVDKKMQKKM 
ENSBTAP00000038327/1-141  PQPGYPGCQP SGPYPPPYPP PGPGMCPVNP LVPGIVGPGI VIDKKVHKKM 
bmy_04686T0/1-156         PQPGYPGCQP SGPYPPPYPP PAPGMCPVNP LAPGMVGPGM VIDKKMQKKM 
BACU007964/1-142          PQPGYPGCQP SGPYPPPYPP PAPGMCPVTP WAPGMVGPGM VIDKKMQKKM 


                          151                                                200
ENSP00000412064/1-148     KKAHKKMHKH QKHHKYHKHG KHSSSSSSSS SSDSD 
ENSBTAP00000038327/1-141  KKAHKKKQKH ------HKHG KH-SSSSSSS SSDSD 
bmy_04686T0/1-156         KKAHKK---- ---------- ---------- ----- 
BACU007964/1-142          KKAHKKKQKH ------HRHG KHSSSSSSSS SSDSD