KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:39 2014 Check: 00 .. Name: ENSP00000451575/1-635 Len: 635 Check: 1905 Weight: 1.00 Name: ENSBTAP00000038371/1-633 Len: 635 Check: 2220 Weight: 1.00 Name: ENSTTRP00000008294/1-585 Len: 635 Check: 8941 Weight: 1.00 Name: bmy_18585T0/1-573 Len: 635 Check: 8063 Weight: 1.00 Name: BACU010714/1-633 Len: 635 Check: 2663 Weight: 1.00 // 1 50 ENSP00000451575/1-635 MATQISTRGS QCTIGQEEYS LYSSLSEDEL VQMAIEQSLA DKTRGPTTAE ENSBTAP00000038371/1-633 MATEISARGR PRAIGQEEYN LYSSLSEDEL VQMAIEQSLA DKTRGPTTTE ENSTTRP00000008294/1-585 ---------M TRFSYAEYFS LFHSCPAP-- ---------- ---------- bmy_18585T0/1-573 MATEISARGR QRAIGQEEYN LYSSLSEDEL VQMAIEQSLA DKTRGPTTTE BACU010714/1-633 MATEISARGK QRAIGQEEYN LYSSLSEDEL VQMAIEQSLA DKTRGPTTSE 51 100 ENSP00000451575/1-635 ATASACTNRQ PAHFYPWTRS TAPPESSPAR APMGLFQGVM QKYSSSLFKT ENSBTAP00000038371/1-633 TTVPTRVNRE PAHFYPWTRS SVSPESAPTS APKGLFQEVM QKYNRS--KS ENSTTRP00000008294/1-585 ---------- -------SRS AVSPESATTA APKGLFQEVM QKYNRS--KS bmy_18585T0/1-573 AAVSTRVNRE PAHFYPWTRS AVSPESAPTS APKGLFQEVM QKYNRS--KS BACU010714/1-633 AAVSTRVNRE PAHFYPWTRS AVSPESAPTS APKGLFQEVM QKYNRS--KS 101 150 ENSP00000451575/1-635 SQLAPADPLI KAIKDGDEEA LKTMIKEGKN LAEPNKEGWL PLHEAAYYGQ ENSBTAP00000038371/1-633 SQLAPVDPVL KAIKEDDEEA LTAMIKAGKN LSEPNKEGWL PLHEAAYYGQ ENSTTRP00000008294/1-585 FQLAPVDPVL KAIKEGDEEA LKAMIKAGKN LAEPNKEGWL PLHEAAYYGQ bmy_18585T0/1-573 SQLAPVDPVL KAIKEGDEAA LKAMIKAGKN LAEPNKEGWL PLHEAAYYGQ BACU010714/1-633 SQLAPVDPVL KAIKEGDEAA LKAMIKAGKN LAEPNKEGWL PLHEAAYYGQ 151 200 ENSP00000451575/1-635 VGCLKVLQRA YPGTIDQRTL QEETAVYLAT CRGHLDCLLS LLQAGAEPDI ENSBTAP00000038371/1-633 LNCLKALHRA YPAVIDQRTL QEETALYLAT CRGHVDCLQF LLQAGAEPDI ENSTTRP00000008294/1-585 LSCLKTLHQA YPAIIDQRTL QEETALYLAT CRGHLDCLQS LLQAGAEPDI bmy_18585T0/1-573 LSCLKVLHQ- ---------- ---------- ---------- ---------- BACU010714/1-633 LSCLKVLHQA YPAVMDQRTL QEETALYLAT CRGHLDCLQS LLQAGAEPDI 201 250 ENSP00000451575/1-635 SNKSRETPLY KACERKNAEA VKILVQHNAD TNHRCNRGWT ALHESVSRND ENSBTAP00000038371/1-633 SNKSRETPLY KACERKNVEA VRILVQYKAD TNHRCNRGWT ALHESVARND ENSTTRP00000008294/1-585 SNKARETPLY KACERKNVEA VRILVQYNAD TNHRCNRGWT ALHESVARND bmy_18585T0/1-573 ---------- -ACERKNVEA VRILVQYNAD TNHRCNRGWT ALHESVAHND BACU010714/1-633 SNKARETPLY KACERKNVEA VRMLVQYNAD TNHRCNRGWT ALHESVAHND 251 300 ENSP00000451575/1-635 LEVMQILVSG GAKVESKNAY GITPLFVAAQ SGQLEALRFL AKYGADINTQ ENSBTAP00000038371/1-633 LEVMEILVSG GAKVEAKNAY GITPLFVAAQ SGQLEALRFL AKYGADINTQ ENSTTRP00000008294/1-585 LEVMEILVSR GAKVEAKNAY GITPLFVAAQ SGQLDALRFL TKHGAEINTQ bmy_18585T0/1-573 LEVMEIL--- GSSAQPEV-- GVTSRTVTAL ITHPSA---S PSPGAEINTQ BACU010714/1-633 LEVMEILVSR GAKVEAKNVY GITPLFVAAQ SGQLEALRFL AKHGAEINTQ 301 350 ENSP00000451575/1-635 ASDNASALYE ACKNEHEEVV EFLLSQGADA NKTNKDGLLP LHIASKKGNY ENSBTAP00000038371/1-633 ASDSASALYE ACKNGHEEVV EFLLSQGADA NKTNKDGMLP LHIASKKGNY ENSTTRP00000008294/1-585 ASDHASALYE ACKNEHEKVV EFLLSQGADA NKANKDGILP LHIASKKGNY bmy_18585T0/1-573 ASDHASALYE ACKNEHEKVV EFLLSQGADA NKANKDGILP LHIASKKGNY BACU010714/1-633 ASDHASALYE ACKNEHEKVV EFLLSQGADA NKANKDGILP LHIASKKGNY 351 400 ENSP00000451575/1-635 RIVQMLLPVT SRTRIRRSGV SPLHLAAERN HDEVLEALLS ARFDVNTPLA ENSBTAP00000038371/1-633 RIVQMLLPVT SRTRVRRSGI SPLHLAAERN NDEVLEALLG ARFDVNAPLA ENSTTRP00000008294/1-585 RIVQMLLPVT SRTRVRRSGI SPLHLAAERN NDEVLEALLS ARFDVNAPLA bmy_18585T0/1-573 RIVQMLLPVT SRTRVRRSGI SPLHLAAERN NDEVLEALLS ARFDVNAPLA BACU010714/1-633 RIVQMLLPVT SRTRVRRSGI SPLHLAAERN NDEVLEALLS ARFDVNAPLA 401 450 ENSP00000451575/1-635 PERARLYEDR RSSALYFAVV NNNVYATELL LQHGADPNRD VISPLLVAIR ENSBTAP00000038371/1-633 PERARLYEDR RSSALYFAVV NNNVYATELL LLAGADPNRD VINPLLVAIR ENSTTRP00000008294/1-585 PERARLYEDR RSSALYFAVV NNNVYATELL LLAGADPNRD VINPLLVAIR bmy_18585T0/1-573 PERARLYEDR RSSVLYFAVV NNNVYATELL LLAGADPNRD VINPLLVAIR BACU010714/1-633 PEPVRLYEDR RSSALYFAVV NNNVYATELL LLAGADPNRD VINPLLVAIR 451 500 ENSP00000451575/1-635 HGCLRTMQLL LDHGANIDAY IATHPTAFPA TIMFAMKCLS LLKFLMDLGC ENSBTAP00000038371/1-633 HGCLRTMQLL LDHGANIDAY IATHPTAFPA TIMFAMKCLS LLKFLMDLGC ENSTTRP00000008294/1-585 HGCLRTMQLL LDHGANIDAY IATHPTAFPA TIMFSMKCLS LLKFLMDLGC bmy_18585T0/1-573 HGCLRTMQLL LDHGANIDAY VATHPTAFPA TIMFSMKCLS VLKFLMDLGC BACU010714/1-633 HGCLRTMQLL LDHGANIDAY IATHPTAFPA TIMFSMKCLS LLKFIMDLGC 501 550 ENSP00000451575/1-635 DGEPCFSCLY GNGPHPPAPQ PSSRFNDAPA ADKEPSVVQF CEFVSAPEVS ENSBTAP00000038371/1-633 NGEPCFSCLY GNGPHPPAPP PSNRFNDAPA SDKAPSAVQF CEFLSAPEVS ENSTTRP00000008294/1-585 NGEPCFSCLY GNGPHPPAPS SSNRFNNAPG SNKAPGVVQF CEILSAPEVS bmy_18585T0/1-573 NGEPCFSCLY GNGPHPPAPS PSNRFNDAPA SNKAPGVVQF CEILSAPEVS BACU010714/1-633 NGEPCFSCLY GNGPHPPAPS PSNRFNDAPA SNKAPGVVQF CEILSAPEVS 551 600 ENSP00000451575/1-635 RWAGPIIDVL LDYVGNVQLC SRLKEHIDSF EDWAVIKEKA EPPRPLAHLC ENSBTAP00000038371/1-633 RWAGPIIDVL LDYVGNVQLC SRLKEHIDSF EDWAVIKEKA EPPRPLAHLC ENSTTRP00000008294/1-585 RWAGPIIDVL LDYVGNVQLC SRLKEHIDSF EDWAVIKEKA EGPRPLAHLC bmy_18585T0/1-573 HWAGPIIDVL LDYVGNVQLC SRLKEHIDSF EDWAVIKEKA EPPRPLAHLC BACU010714/1-633 RWAGPIIDVL LDYVGNVQLC SRLKEHIDSF EDWAVIKEKA EPPRPLVHLC 601 650 ENSP00000451575/1-635 RLRVRKAIGK YRIKLLDTLP LPGRLIRYLK YENTQ ENSBTAP00000038371/1-633 RLRVRKAIGK YRIKLLDTLP LPGRLIRYLK YENTQ ENSTTRP00000008294/1-585 RLQVRKAIGK YRIKLLDTLP LPGRLIRYLK YENTQ bmy_18585T0/1-573 RLQVRKAIGK YRIKLLDTLP LPGRLIRYLK YENTQ BACU010714/1-633 RLQVRKAIGK YRIKLLDTLP LPGRLIRYLK YENTQ