KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:48:43 2014 Check: 00 .. Name: bmy_00335T0/1-354 Len: 356 Check: 3094 Weight: 1.00 Name: ENSP00000260653/1-332 Len: 356 Check: 5723 Weight: 1.00 Name: ENSBTAP00000038493/1-328 Len: 356 Check: 3662 Weight: 1.00 Name: BACU013903/1-254 Len: 356 Check: 2012 Weight: 1.00 // 1 50 bmy_00335T0/1-354 MPPKIRDPGA QQPAGPGSAR GQSMVFRSPL DLYSSHFLLP NFADSHHRSL ENSP00000260653/1-332 ---------- ---------- ---MVFRSPL DLYSSHFLLP NFADSHHRSI ENSBTAP00000038493/1-328 ---------- ---------- ---MVFRSPL DLYSSHFLLP NFADSHHRSL BACU013903/1-254 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_00335T0/1-354 LLASSGAGNG AGGGGAGGG- -GGGNCAGGG GAGGAGGGGS GGGSRAPPEE ENSP00000260653/1-332 LLASSGGGNG AGGGGGAGGG SGGGNGAGGG GAGGAGGGG- GGGSRAPPEE ENSBTAP00000038493/1-328 LLASSGGGNG SGGGG--GG- -SGGNGVGGG GAGGAGGGG- GGGSRAPPEE BACU013903/1-254 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_00335T0/1-354 LSMFQLPTLN FSPEQVASVC ETLEETGDIE RLGRFLWSLP VAPGACEAIN ENSP00000260653/1-332 LSMFQLPTLN FSPEQVASVC ETLEETGDIE RLGRFLWSLP VAPGACEAIN ENSBTAP00000038493/1-328 LSMFQLPTLN FSPEQVASVC ETLEETGDIE RLGRFLWSLP VAPGACEAIN BACU013903/1-254 --MFQLPTLN FSPEQVASVC ETLEETGDIE RLGRFLWSLP VAPGACEAIN 151 200 bmy_00335T0/1-354 KHESILRARA VVAFHTGNFR DLYHILENHK FTKESHGKLQ AMWLEAHYQE ENSP00000260653/1-332 KHESILRARA VVAFHTGNFR DLYHILENHK FTKESHGKLQ AMWLEAHYQE ENSBTAP00000038493/1-328 KHESILRARA VVAFHTGNFR DLYHILENHK FTKESHGKLQ AMWLEAHYQE BACU013903/1-254 KHESILRARA VVAFHTGNFR DLYHILENHK FTKESHGKLQ AMWLEAHYQE 201 250 bmy_00335T0/1-354 AEKLRGRPLG PVDKYRVRKK FPLPRTIWDG EQKTHCFKER TRSLLREWYL ENSP00000260653/1-332 AEKLRGRPLG PVDKYRVRKK FPLPRTIWDG EQKTHCFKER TRSLLREWYL ENSBTAP00000038493/1-328 AEKLRGRPLG PVDKYRVRKK FPLPRTIWDG EQKTHCFKER TRSLLREWYL BACU013903/1-254 AEKLRGRPLG PVDKYRVRKK FPLPRTIWDG EQKTHCFKER TRSLLREWYL 251 300 bmy_00335T0/1-354 QDPYPNPSKK RELAQATGLT PTQVGNWFKN RRQRDRAAAA KNRLQHQAIG ENSP00000260653/1-332 QDPYPNPSKK RELAQATGLT PTQVGNWFKN RRQRDRAAAA KNRLQHQAIG ENSBTAP00000038493/1-328 QDPYPNPSKK RELAQATGLT PTQVGNWFKN RRQRDRAAAA KNRLQHQAIG BACU013903/1-254 QDPYPNPSKK RELAQATGLT PTQVGNWFKN RRQRDRAAAA KNRLQHQAIG 301 350 bmy_00335T0/1-354 PSGMRSLAEP GCPTHGSAES PSTAASPTTS VSSLTERADT GTSILSVTSS ENSP00000260653/1-332 PSGMRSLAEP GCPTHGSAES PSTAASPTTS VSSLTERADT GTSILSVTSS ENSBTAP00000038493/1-328 PSGMRSLAEP GCPTHGSAES PSTAASPTTS VSSLTERADT GTSILSVTSS BACU013903/1-254 PSGMRSLAEP GCPTHGSAES PSTAASPTTS VSSLTERADT GTSILSVTSS 351 400 bmy_00335T0/1-354 DSECDV ENSP00000260653/1-332 DSECDV ENSBTAP00000038493/1-328 DSECDV BACU013903/1-254 DSECDV