KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:48:48 2014 Check: 00 .. Name: ENSP00000377779/1-683 Len: 683 Check: 1114 Weight: 1.00 Name: ENSBTAP00000038597/1-683 Len: 683 Check: 3753 Weight: 1.00 Name: ENSTTRP00000012779/1-584 Len: 683 Check: 4989 Weight: 1.00 Name: bmy_17072T0/1-393 Len: 683 Check: 2599 Weight: 1.00 Name: BACU000522/1-683 Len: 683 Check: 3094 Weight: 1.00 // 1 50 ENSP00000377779/1-683 MDDYKYQDNY GGYAPSDGYY RGNESNPEED AQSDVTEGHD EEDEIYEGEY ENSBTAP00000038597/1-683 MDDYKYQDNY EGYAPSDGYY RGNESNPEED AQSDVTEGHD EEDEIYEGEY ENSTTRP00000012779/1-584 ---------- ---------- ---------- ---------- ---------- bmy_17072T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU000522/1-683 MDDYRYHDNY EGYAQSDGYY RGNESNPEED AQSDVTEGHD EEDEIYEGEY 51 100 ENSP00000377779/1-683 QGIPHPDDVK AKQAKMAPSR MDSLRGQTDL MAERLEDEEQ LAHQYETIMD ENSBTAP00000038597/1-683 QGIPHPDDVK AKQAKMASSR ADGLRGQADL LAERMEDEEQ LAHQYETIID ENSTTRP00000012779/1-584 ---------- ---------- ---------- ---------- -----ETIID bmy_17072T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU000522/1-683 QGIPHPDDIK TKQTKMAPSR VDGLRGQADL MAERMEEEEQ LAHQYETIID 101 150 ENSP00000377779/1-683 ECGHGRFQWI LFFVLGLALM ADGVEVFVVS FALPSAEKDM CLSSSKKGML ENSBTAP00000038597/1-683 ECGHGRFQWT LFFVLGLALM ADGVEVFVVS FALPSAEKDM CLSSSKKGML ENSTTRP00000012779/1-584 ECGHGRFQWT LFFVLGLALM ADGVEVFVVS FALPSAEKDM CLSSSKKGML bmy_17072T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU000522/1-683 ECGHGRFQWI LFFVLGLALM ADGVEVFVVS FALPSAEKDM CLSSSKKGML 151 200 ENSP00000377779/1-683 GMIVYLGMMA GAFILGGLAD KLGRKRVLSM SLAVNASFAS LSSFVQGYGA ENSBTAP00000038597/1-683 GLIVYLGMMG GAFVLGGLAD KLGRKRVLSI SLAINASFAS LSSFVQGYGA ENSTTRP00000012779/1-584 GLIVYLGMMG GAFILGGLAD KLGRKRVLSM SLAVNASFAS LSSFVQGYGA bmy_17072T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU000522/1-683 GLIVYLGMMG GAFILGGLAD KLGRKRVLSM SLAINASFAS LSSFVQGYGA 201 250 ENSP00000377779/1-683 FLFCRLISGI GIGGALPIVF AYFSEFLSRE KRGEHLSWLG IFWMTGGLYA ENSBTAP00000038597/1-683 FLFCRLISGI GIGGALPIVF AYFSEFLSRE KRGEHLSWLG IFWMTGGIYA ENSTTRP00000012779/1-584 FLFCRLISGI GIGGSLPIVF AYFSEFLSRE KRGEHLSWLG IFWMTGGIYA bmy_17072T0/1-393 ---------- ---------- ---------- ---------- ---------- BACU000522/1-683 FLFCRLISGI GIGGALPIVF AYFSEFLSRE KRGEHLSWLG IFWMTGGIYA 251 300 ENSP00000377779/1-683 SAMAWSIIPH YGWGFSMGTN YHFHSWRVFV IVCALPCTVS MVALKFMPES ENSBTAP00000038597/1-683 SAMAWSIIPH YGWGFSMGSN YHFHSWRVFV IVCALPCTVS MVALKFLPES ENSTTRP00000012779/1-584 SAMAWSIIPH YGWGFSMGTN YHFHSWRVFV IVCALPCTVS MVALKFMPES bmy_17072T0/1-393 ---------- ------MGTN YHFHSWRVFV IVCALPCTVS MVALKFMPES BACU000522/1-683 SAMAWSIIPH YGWGFSMGTN YHFHSWRVFV IVCALPCTVS MVALKFMPES 301 350 ENSP00000377779/1-683 PRFLLEMGKH DEAWMILKQV HDTNMRAKGT PEKVFTVSNI KTPKQMDEFI ENSBTAP00000038597/1-683 PRFLLEMGKH DEAWMILKHV HDTNMRAKGA PEKVFTVSNI KTPKQMDEFI ENSTTRP00000012779/1-584 PRFLLEMGKH DEAWMILKHV HDTNMRAKGP --EVFTVSNI KTPKQMDEFI bmy_17072T0/1-393 PRFLLEMGKH DEAWMILKHV HDTNMRAKGA PEKVFTVSNI KTPKQMDEFI BACU000522/1-683 PRFLLEMGKH DEAWMILKHV HDTNMRAKGA PEKVFTVSNI KTPKQMDEFI 351 400 ENSP00000377779/1-683 EIQSSTGTWY QRWLVRFKTI FKQVWDNALY CVMGPYRMNT LILAVVWFAM ENSBTAP00000038597/1-683 EIQSSTGTWY QRWLVRFKTT FKQVWENALY CVMGPYRMNT LILAVVWFTM ENSTTRP00000012779/1-584 EIQSSTGTWY QRWLVRFKTT FKQVWENALY CVMGPYRMNT LILAVVWFTM bmy_17072T0/1-393 EIQSSTGTWY QRWLVRFKTT FKQVWENALY ---------- ---------- BACU000522/1-683 EIQSSTGTWY QRWLVRFKTT FKQVWENALY CVMGPYRMNT LILAVVWFTM 401 450 ENSP00000377779/1-683 AFSYYGLTVW FPDMIRYFQD EEYKSKMKVF FGEHVYGATI NFTMENQIHQ ENSBTAP00000038597/1-683 ALSYYGLTVW FPDMIRYFQD EAYKSKMKVF HDEHVYGVTI NFTMENQIHQ ENSTTRP00000012779/1-584 ALSYYGLTVW FPDMIRYFQD EAYKSKMKVF HDEHVYGVTI NFTMENQIHQ bmy_17072T0/1-393 ----YGLTVW FPDMIRYFQD EAYKSKMKVF HDEHVYGVTI NFTMENQIHQ BACU000522/1-683 ALSYYGLTVW FPDMIRYFQD EAYKSKMKVF HDEHVYGVTI NFTMENQIHQ 451 500 ENSP00000377779/1-683 HGKLVNDKFT RMYFKHVLFE DTFFDECYFE DVTSTDTYFK NCTIESTIFY ENSBTAP00000038597/1-683 HGKLVNDKFT KMYFKHVLFE DTLFDECYFE DVTSTDTYFK NCTIESTIFY ENSTTRP00000012779/1-584 HGKLVNDKFT KMYFKHVLFE DTLFDECYFE DVTSTDTYFK NCTIESTIFY bmy_17072T0/1-393 HGKLVNDKFT KMYFKHVLFE DTLFDECYFE DVTSTDTYFK NCTIESTIFY BACU000522/1-683 HGKLVNDKFT KMYFKHVLFE DTLFDECYFE DVTSTDTYFK NCTIESTIFY 501 550 ENSP00000377779/1-683 NTDLYEHKFI NCRFINSTFL EQKEGCHMDL EQDNDFLIYL VSFLGSLSVL ENSBTAP00000038597/1-683 NTDLYQHKFI NCHFINVTFL EQKEGCHMDL EQDNDFLIYL VSFLGSLSVL ENSTTRP00000012779/1-584 N--LYQHKFI NCHFINVTFL EQKEGCHMDL EQDNDFLIYL VSFLGSLSVL bmy_17072T0/1-393 NTDLYQHKFI NCHFINVTFL EQKEGCHXDL EQDNDFLIYL VSFLGSLSVL BACU000522/1-683 NTDLYQHKFI NCHFINVTFL EQKEGCHMDL EQDNDFLIYL VSFLGSLSVL 551 600 ENSP00000377779/1-683 PGNIISALLM DRIGRLKMIG GSMLISAVCC FFLFFGNSES AMIGWQCLFC ENSBTAP00000038597/1-683 PGNIISALLM DRVGRLKMIG GSMLISAVCC FFLFFGNSES AMIGWQCLFC ENSTTRP00000012779/1-584 PGNIISALLM DRVGRLKMIG GSMLISAVCC FFLFFGNSES AMIGWQCLFC bmy_17072T0/1-393 PGNIISALLM DRVGRLKMIG GSMLISAVCC FFLFFGNSES AMIGWQCLFC BACU000522/1-683 PGNIISALLM DRVGRLKMIG GSMLISAVCC FFLFFGNSES AMIGWQCLFC 601 650 ENSP00000377779/1-683 GTSIAAWNAL DVITVELYPT NQRATAFGIL NGLCKFGAIL GNTIFASFVG ENSBTAP00000038597/1-683 GTSIAAWNAL DVITVELYPT NQRATAFGIL NGLCKFGAIL GNTIFASFVG ENSTTRP00000012779/1-584 GTSIAAWNAL DVITVELYPT NQRATAFGIL NGLCKFGAIL GNTIFASFVG bmy_17072T0/1-393 GTSIAAWNAL DVITVELYPT NQRATAFGIL NGLCKFGAIL GNTIFASFVG BACU000522/1-683 GTSIAAWNAL DVITVELYPT NQRATAFGIL NGLCKFGAIL GNTIFASFVG 651 700 ENSP00000377779/1-683 ITKVVPILLA AASLVGGGLI ALRLPETREQ VLM ENSBTAP00000038597/1-683 ITKVVPILLA ATSLVGGGLI ALRLPETREQ VLM ENSTTRP00000012779/1-584 ITKVVPILLA ATSLVGGGLI ALRLPETREQ VLM bmy_17072T0/1-393 ITKVVPILLA ATSLVGGGLI ALRLPETREQ VLM BACU000522/1-683 ITKVVPILLA ATSLVGGGLI ALRLPETREQ VLM